RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 GAGE12JA6NER3 117 aa8.97□□□□□ -0.97
CAPN1-228ENST00000534373 IGHV3-30P01768 117 aa8.97□□□□□ -0.97
CAPN1-228ENST00000534373 IGHV3-33P01772 117 aa8.97□□□□□ -0.97
CAPN1-228ENST00000534373 C1QBP02746 253 aa8.97□□□□□ -0.97
CAPN1-228ENST00000534373 IGHV3-30-3P0DP02 117 aa8.97□□□□□ -0.97
CAPN1-228ENST00000534373 IGHV3-30-5P0DP03 117 aa8.97□□□□□ -0.97
CAPN1-228ENST00000534373 GCSHP23434 173 aa8.97□□□□□ -0.97
CAPN1-228ENST00000534373 XGP55808 180 aa8.97□□□□□ -0.97
CAPN1-228ENST00000534373 GAGE1Q13065 139 aa8.97□□□□□ -0.97
CAPN1-228ENST00000534373 GAGE4Q13068 117 aa8.97□□□□□ -0.97
CAPN1-228ENST00000534373 GAGE5Q13069 117 aa8.97□□□□□ -0.97
CAPN1-228ENST00000534373 GAGE13Q4V321 117 aa8.97□□□□□ -0.97
CAPN1-228ENST00000534373 JPT2Q9H910 190 aa8.97□□□□□ -0.97
CAPN1-228ENST00000534373 TRAV8-3A0A0A6YYJ7 113 aa8.96□□□□□ -0.98
CAPN1-228ENST00000534373 GRIFINA4D1Z8 144 aa8.96□□□□□ -0.98
CAPN1-228ENST00000534373 TOR2AQ5JU69 321 aa8.96□□□□□ -0.98
CAPN1-228ENST00000534373 ZFP82Q8N141 532 aa8.96□□□□□ -0.98
CAPN1-228ENST00000534373 C14orf178Q8N769 122 aaPredicted RBP8.96□□□□□ -0.98
CAPN1-228ENST00000534373 FAM213BQ8TBF2 198 aa8.96□□□□□ -0.98
CAPN1-228ENST00000534373 TRBV10-1A0A0K0K1A3 114 aa8.95□□□□□ -0.98
CAPN1-228ENST00000534373 A0A1B0GV50 99 aa8.95□□□□□ -0.98
CAPN1-228ENST00000534373 EPM2AB3EWF7 344 aa8.95□□□□□ -0.98
CAPN1-228ENST00000534373 CXCL1P09341 107 aa8.95□□□□□ -0.98
CAPN1-228ENST00000534373 H2AFB1P0C5Y9 115 aa8.95□□□□□ -0.98
CAPN1-228ENST00000534373 FUSP35637 526 aaKnown RBP eCLIP8.95□□□□□ -0.98
CAPN1-228ENST00000534373 KRTAP10-1P60331 282 aa8.95□□□□□ -0.98
CAPN1-228ENST00000534373 MLST8Q9BVC4 326 aa8.95□□□□□ -0.98
CAPN1-228ENST00000534373 Q9HAA7 133 aa8.95□□□□□ -0.98
CAPN1-228ENST00000534373 M0R381 172 aa8.94□□□□□ -0.98
CAPN1-228ENST00000534373 FAM74A4Q5TZK3 123 aa8.94□□□□□ -0.98
CAPN1-228ENST00000534373 BAGE2Q86Y30 109 aa8.94□□□□□ -0.98
CAPN1-228ENST00000534373 Q8N814 137 aa8.94□□□□□ -0.98
CAPN1-228ENST00000534373 Q9UF83 564 aa8.94□□□□□ -0.98
CAPN1-228ENST00000534373 COX11Q9Y6N1 276 aa8.94□□□□□ -0.98
CAPN1-228ENST00000534373 TMSB15BA0A087X1C1 80 aa8.93□□□□□ -0.98
CAPN1-228ENST00000534373 IGLV5-52A0A0A0MRZ9 124 aa8.93□□□□□ -0.98
CAPN1-228ENST00000534373 A0A087WWL8 130 aa8.92□□□□□ -0.98
CAPN1-228ENST00000534373 SCO2A0A1W2PP80 73 aa8.92□□□□□ -0.98
CAPN1-228ENST00000534373 RAB5CP51148 216 aa8.92□□□□□ -0.98
CAPN1-228ENST00000534373 RAB4BP61018 213 aa8.92□□□□□ -0.98
CAPN1-228ENST00000534373 RPL36AP83881 106 aaKnown RBP8.92□□□□□ -0.98
CAPN1-228ENST00000534373 C9orf62Q8N4C0 152 aa8.92□□□□□ -0.98
CAPN1-228ENST00000534373 RPL36ALQ969Q0 106 aaKnown RBP8.92□□□□□ -0.98
CAPN1-228ENST00000534373 TMEM70Q9BUB7 260 aa8.92□□□□□ -0.98
CAPN1-228ENST00000534373 CHCHD7Q9BUK0 85 aa8.92□□□□□ -0.98
CAPN1-228ENST00000534373 SSBP4Q9BWG4 385 aaPredicted RBP8.92□□□□□ -0.98
CAPN1-228ENST00000534373 URGCP-MRPS24S4R325 110 aa8.92□□□□□ -0.98
CAPN1-228ENST00000534373 TRBV7-3A0A075B6L6 115 aa8.91□□□□□ -0.98
CAPN1-228ENST00000534373 TRAV1-1A0A0B4J248 108 aa8.91□□□□□ -0.98
CAPN1-228ENST00000534373 NKX2-5P52952 324 aaPredicted RBP8.91□□□□□ -0.98
CAPN1-228ENST00000534373 EIF5AL1Q6IS14 154 aaKnown RBP8.91□□□□□ -0.98
CAPN1-228ENST00000534373 DAZ4Q86SG3 579 aaKnown RBP8.91□□□□□ -0.98
CAPN1-228ENST00000534373 SLC51BQ86UW2 128 aa8.91□□□□□ -0.98
CAPN1-228ENST00000534373 NIT1Q86X76 327 aa8.91□□□□□ -0.98
CAPN1-228ENST00000534373 OR10G8Q8NGN5 311 aa8.91□□□□□ -0.98
CAPN1-228ENST00000534373 RMI2Q96E14 147 aa8.91□□□□□ -0.98
CAPN1-228ENST00000534373 MANBALQ9NQG1 85 aa8.91□□□□□ -0.98
CAPN1-228ENST00000534373 DAZ3Q9NR90 486 aaKnown RBP8.91□□□□□ -0.98
CAPN1-228ENST00000534373 FAT1Q14517 4588 aa8.9□□□□□ -0.98
CAPN1-228ENST00000534373 TEX46H3BTG2 121 aa8.9□□□□□ -0.98
CAPN1-228ENST00000534373 SNAI2O43623 268 aa8.9□□□□□ -0.98
CAPN1-228ENST00000534373 OR5AL1P0C617 328 aa8.9□□□□□ -0.98
CAPN1-228ENST00000534373 UBE2D3P61077 147 aa8.9□□□□□ -0.98
CAPN1-228ENST00000534373 UBE2D2P62837 147 aa8.9□□□□□ -0.98
CAPN1-228ENST00000534373 ELOBQ15370 118 aa8.9□□□□□ -0.98
CAPN1-228ENST00000534373 FRZBQ92765 325 aa8.9□□□□□ -0.98
CAPN1-228ENST00000534373 RPL35P42766 123 aaKnown RBP8.89□□□□□ -0.99
CAPN1-228ENST00000534373 Q8N3U1 123 aa8.89□□□□□ -0.99
CAPN1-228ENST00000534373 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.89□□□□□ -0.99
CAPN1-228ENST00000534373 C11orf52Q96A22 123 aa8.89□□□□□ -0.99
CAPN1-228ENST00000534373 A0A087WX48 190 aa8.88□□□□□ -0.99
CAPN1-228ENST00000534373 RPL19P84098 196 aaKnown RBP8.88□□□□□ -0.99
CAPN1-228ENST00000534373 SPANXN1Q5VSR9 72 aa8.88□□□□□ -0.99
CAPN1-228ENST00000534373 PRR27Q6MZM9 219 aa8.88□□□□□ -0.99
CAPN1-228ENST00000534373 KCNIP4Q6PIL6 250 aa8.88□□□□□ -0.99
CAPN1-228ENST00000534373 OR10AG1Q8NH19 301 aa8.88□□□□□ -0.99
CAPN1-228ENST00000534373 SMIM12Q96EX1 92 aa8.88□□□□□ -0.99
CAPN1-228ENST00000534373 SULT1A2P50226 295 aa8.87□□□□□ -0.99
CAPN1-228ENST00000534373 CCL20P78556 96 aa8.87□□□□□ -0.99
CAPN1-228ENST00000534373 Q0VG73 95 aa8.87□□□□□ -0.99
CAPN1-228ENST00000534373 Q5VSD8 79 aa8.87□□□□□ -0.99
CAPN1-228ENST00000534373 GNG13Q9P2W3 67 aa8.87□□□□□ -0.99
CAPN1-228ENST00000534373 TRBV6-8A0A0A6YYG3 113 aa8.86□□□□□ -0.99
CAPN1-228ENST00000534373 FAM229AH3BQW9 127 aa8.86□□□□□ -0.99
CAPN1-228ENST00000534373 INAFM2P0DMQ5 153 aa8.86□□□□□ -0.99
CAPN1-228ENST00000534373 PKIAP61925 76 aa8.86□□□□□ -0.99
CAPN1-228ENST00000534373 ZNF56Q15929 161 aa8.86□□□□□ -0.99
CAPN1-228ENST00000534373 TMEM97Q5BJF2 176 aa8.86□□□□□ -0.99
CAPN1-228ENST00000534373 Q8N976 141 aa8.86□□□□□ -0.99
CAPN1-228ENST00000534373 KLK12Q9UKR0 248 aa8.86□□□□□ -0.99
CAPN1-228ENST00000534373 PDE6DO43924 150 aa8.85□□□□□ -0.99
CAPN1-228ENST00000534373 SMIM17P0DL12 118 aa8.85□□□□□ -0.99
CAPN1-228ENST00000534373 RPS20P60866 119 aaKnown RBP8.85□□□□□ -0.99
CAPN1-228ENST00000534373 ATRAIDQ6UW56 229 aa8.85□□□□□ -0.99
CAPN1-228ENST00000534373 ALKAL2Q6UX46 152 aa8.85□□□□□ -0.99
CAPN1-228ENST00000534373 NEXN-AS1Q8NBZ9 246 aa8.85□□□□□ -0.99
CAPN1-228ENST00000534373 DAZAP1Q96EP5 407 aaKnown RBP8.85□□□□□ -0.99
CAPN1-228ENST00000534373 IGKV2D-24A0A075B6R9 120 aa8.84□□□□□ -0.99
CAPN1-228ENST00000534373 RBFOX3A6NFN3 312 aa8.84□□□□□ -0.99
CAPN1-228ENST00000534373 TMEM262E9PQX1 116 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms