RNA–Protein interactions for RNA: ENST00000534284.1

CYCSP28-201, Transcript of cytochrome c, somatic pseudogene 28, humanhuman

BASIC

Gene CYCSP28, Length 321 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP28-201ENST00000534284 IGHV1-69P01742 117 aa3.51□□□□□ -1.85
CYCSP28-201ENST00000534284 S100A4P26447 101 aaKnown RBP3.51□□□□□ -1.85
CYCSP28-201ENST00000534284 ZNF80P51504 273 aaPredicted RBP3.51□□□□□ -1.85
CYCSP28-201ENST00000534284 LMO4P61968 165 aa3.51□□□□□ -1.85
CYCSP28-201ENST00000534284 PRB3Q04118 309 aaPredicted RBP3.51□□□□□ -1.85
CYCSP28-201ENST00000534284 UFSP1Q6NVU6 142 aa3.51□□□□□ -1.85
CYCSP28-201ENST00000534284 SMIM29Q86T20 159 aa3.51□□□□□ -1.85
CYCSP28-201ENST00000534284 APRG1Q8IVJ8 170 aa3.51□□□□□ -1.85
CYCSP28-201ENST00000534284 ITLN2Q8WWU7 325 aaPredicted RBP3.51□□□□□ -1.85
CYCSP28-201ENST00000534284 TMEM158Q8WZ71 300 aa3.51□□□□□ -1.85
CYCSP28-201ENST00000534284 ODF3Q96PU9 254 aa3.51□□□□□ -1.85
CYCSP28-201ENST00000534284 VPS25Q9BRG1 176 aa3.51□□□□□ -1.85
CYCSP28-201ENST00000534284 CHAC1Q9BUX1 264 aa3.51□□□□□ -1.85
CYCSP28-201ENST00000534284 DPH3P1Q9H4G8 78 aa3.51□□□□□ -1.85
CYCSP28-201ENST00000534284 HHLA3Q9XRX5 114 aa3.51□□□□□ -1.85
CYCSP28-201ENST00000534284 UFC1Q9Y3C8 167 aa3.51□□□□□ -1.85
CYCSP28-201ENST00000534284 S4R3C0 116 aa3.51□□□□□ -1.85
CYCSP28-201ENST00000534284 IGF2RP11717 2491 aa3.51□□□□□ -1.85
CYCSP28-201ENST00000534284 MGAQ8IWI9 3026 aa3.51□□□□□ -1.85
CYCSP28-201ENST00000534284 WDFY4Q6ZS81 3184 aa3.51□□□□□ -1.85
CYCSP28-201ENST00000534284 DMDP11532 3685 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 TRAV8-2A0A0B4J237 113 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 TRAV8-6A0A0B4J262 113 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 IGKV3D-20A0A0C4DH25 116 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 IGHV7-4-1A0A0J9YVY3 117 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 OR11H12B2RN74 326 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 SMKR1H3BMG3 65 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 NXPH4O95158 308 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 IGHV3-23P01764 117 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 IGHG2P01859 326 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 TRGV3P03979 118 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 HERVK_113P61574 105 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 LOXL1Q08397 574 aaPredicted RBP3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 ERCC8Q13216 396 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 ZNF876PQ49A33 203 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 CEND1Q8N111 149 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 POM121L12Q8N7R1 296 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 OR11H1Q8NG94 326 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 OR11H2Q8NH07 326 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 TOMM6Q96B49 74 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 TMEM141Q96I45 108 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 FOXC2Q99958 501 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 Q9HAA7 133 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 DAZ1Q9NQZ3 744 aaKnown RBP3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 PHLDA3Q9Y5J5 127 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 SPCS1Q9Y6A9 102 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 HIVEP3Q5T1R4 2406 aa3.5□□□□□ -1.85
CYCSP28-201ENST00000534284 TRBV25-1A0A075B6N4 114 aa3.49□□□□□ -1.85
CYCSP28-201ENST00000534284 F8W1H4 67 aa3.49□□□□□ -1.85
CYCSP28-201ENST00000534284 H3BUT2 72 aa3.49□□□□□ -1.85
CYCSP28-201ENST00000534284 K7EQD1 137 aa3.49□□□□□ -1.85
CYCSP28-201ENST00000534284 LY6HO94772 140 aa3.49□□□□□ -1.85
CYCSP28-201ENST00000534284 ZC2HC1BQ5TFG8 222 aa3.49□□□□□ -1.85
CYCSP28-201ENST00000534284 CLEC2AQ6UVW9 174 aa3.49□□□□□ -1.85
CYCSP28-201ENST00000534284 RNF182Q8N6D2 247 aa3.49□□□□□ -1.85
CYCSP28-201ENST00000534284 ZFAND2AQ8N6M9 145 aa3.49□□□□□ -1.85
CYCSP28-201ENST00000534284 DLX4Q92988 240 aaPredicted RBP3.49□□□□□ -1.85
CYCSP28-201ENST00000534284 FAM19A4Q96LR4 140 aa3.49□□□□□ -1.85
CYCSP28-201ENST00000534284 C18orf15Q96N68 181 aa3.49□□□□□ -1.85
CYCSP28-201ENST00000534284 SCGB3A1Q96QR1 104 aa3.49□□□□□ -1.85
CYCSP28-201ENST00000534284 KIR2DL4Q99706 377 aa3.49□□□□□ -1.85
CYCSP28-201ENST00000534284 OVOL2Q9BRP0 275 aa3.49□□□□□ -1.85
CYCSP28-201ENST00000534284 BPESC1Q9GZL8 116 aa3.49□□□□□ -1.85
CYCSP28-201ENST00000534284 CYSLTR1Q9Y271 337 aa3.49□□□□□ -1.85
CYCSP28-201ENST00000534284 MYMXA0A1B0GTQ4 84 aa3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 A0A1B0GWB2 263 aa3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 A6NDX4 124 aa3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 E9PLD3 99 aa3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 G3V318 75 aa3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 H3BVH4 76 aa3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 SOCS3O14543 225 aa3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 DUSP14O95147 198 aaKnown RBP3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 SCGB1A1P11684 91 aa3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 HLA-DMBP28068 263 aa3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 UQCRFS1P47985 274 aa3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 SNRPD3P62318 126 aaKnown RBP3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 LINC01620Q4KN68 170 aa3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 Q6ZRP5 223 aa3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 NEGR1Q7Z3B1 354 aa3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 GPHB5Q86YW7 130 aa3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 PCP2Q8IVA1 136 aa3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 HIST1H4GQ99525 98 aa3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 TIMM17AQ99595 171 aa3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 MCRIP2Q9BUT9 160 aaKnown RBP3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 MRPL35Q9NZE8 188 aaKnown RBP3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 CHTOPQ9Y3Y2 248 aaKnown RBP3.48□□□□□ -1.85
CYCSP28-201ENST00000534284 BOD1L1Q8NFC6 3051 aa3.47□□□□□ -1.85
CYCSP28-201ENST00000534284 MUC3AQ02505 3323 aa3.47□□□□□ -1.85
CYCSP28-201ENST00000534284 ARHGAP32A7KAX9 2087 aa3.47□□□□□ -1.85
CYCSP28-201ENST00000534284 LOC400499M0QZD8 3231 aa3.47□□□□□ -1.85
CYCSP28-201ENST00000534284 CELSR3Q9NYQ7 3312 aa3.47□□□□□ -1.85
CYCSP28-201ENST00000534284 TRAV40A0A0B4J280 105 aa3.47□□□□□ -1.85
CYCSP28-201ENST00000534284 IGHV3-35A0A0C4DH35 117 aa3.47□□□□□ -1.85
CYCSP28-201ENST00000534284 TRBV6-5A0A0K0K1A5 114 aa3.47□□□□□ -1.85
CYCSP28-201ENST00000534284 KLLNB2CW77 178 aa3.47□□□□□ -1.85
CYCSP28-201ENST00000534284 B4DSR2 109 aa3.47□□□□□ -1.85
CYCSP28-201ENST00000534284 G3V4G9 280 aa3.47□□□□□ -1.85
CYCSP28-201ENST00000534284 J3QLI3 93 aa3.47□□□□□ -1.85
CYCSP28-201ENST00000534284 CRYBA4P53673 196 aa3.47□□□□□ -1.85
CYCSP28-201ENST00000534284 RHOHQ15669 191 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms