RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 MUC4Q99102 2169 aa14.61□□□□□ -0.07
CAPN1-226ENST00000533820 ASIPP42127 132 aa14.61□□□□□ -0.07
CAPN1-226ENST00000533820 Q6ZS46 218 aa14.61□□□□□ -0.07
CAPN1-226ENST00000533820 F8VRH5 84 aa14.61□□□□□ -0.07
CAPN1-226ENST00000533820 H7C1H1 209 aa14.61□□□□□ -0.07
CAPN1-226ENST00000533820 C9orf139Q6ZV77 190 aa14.61□□□□□ -0.07
CAPN1-226ENST00000533820 PPDPFLQ8WWR9 84 aa14.61□□□□□ -0.07
CAPN1-226ENST00000533820 MOB4Q9Y3A3 225 aa14.61□□□□□ -0.07
CAPN1-226ENST00000533820 C19orf84I3L1E1 186 aa14.6□□□□□ -0.07
CAPN1-226ENST00000533820 RHODO00212 210 aa14.6□□□□□ -0.07
CAPN1-226ENST00000533820 C2orf66Q6UXQ4 117 aa14.6□□□□□ -0.07
CAPN1-226ENST00000533820 ZFP2Q6ZN57 461 aa14.6□□□□□ -0.07
CAPN1-226ENST00000533820 IFITM1P13164 125 aa14.6□□□□□ -0.07
CAPN1-226ENST00000533820 PLNP26678 52 aa14.6□□□□□ -0.07
CAPN1-226ENST00000533820 UTP20O75691 2785 aaKnown RBP14.6□□□□□ -0.07
CAPN1-226ENST00000533820 POLQO75417 2590 aa14.6□□□□□ -0.07
CAPN1-226ENST00000533820 TRAV21A0A0B4J279 112 aa14.6□□□□□ -0.07
CAPN1-226ENST00000533820 BLCAPP62952 87 aa14.6□□□□□ -0.07
CAPN1-226ENST00000533820 ITLN2Q8WWU7 325 aaPredicted RBP14.6□□□□□ -0.07
CAPN1-226ENST00000533820 FLNCQ14315 2725 aa14.59□□□□□ -0.07
CAPN1-226ENST00000533820 MRPL53Q96EL3 112 aaKnown RBP14.59□□□□□ -0.07
CAPN1-226ENST00000533820 SPXQ9BT56 116 aa14.59□□□□□ -0.07
CAPN1-226ENST00000533820 SNCGO76070 127 aa14.59□□□□□ -0.07
CAPN1-226ENST00000533820 ZNF688P0C7X2 276 aa14.59□□□□□ -0.07
CAPN1-226ENST00000533820 DPH3P1Q9H4G8 78 aa14.59□□□□□ -0.07
CAPN1-226ENST00000533820 CSDC2Q9Y534 153 aaKnown RBP14.59□□□□□ -0.07
CAPN1-226ENST00000533820 IGKV3-20P01619 116 aa14.58□□□□□ -0.07
CAPN1-226ENST00000533820 IGHV4-38-2P0DP08 117 aa14.58□□□□□ -0.07
CAPN1-226ENST00000533820 KLHL30-AS1Q8NEE0 82 aa14.58□□□□□ -0.07
CAPN1-226ENST00000533820 ATP6V0E2Q8NHE4 81 aa14.58□□□□□ -0.07
CAPN1-226ENST00000533820 A0A087WWL8 130 aa14.58□□□□□ -0.08
CAPN1-226ENST00000533820 DLX4Q92988 240 aaPredicted RBP14.58□□□□□ -0.08
CAPN1-226ENST00000533820 IGHV4-4A0A075B6R2 117 aa14.57□□□□□ -0.08
CAPN1-226ENST00000533820 SCGB1D4Q6XE38 83 aa14.57□□□□□ -0.08
CAPN1-226ENST00000533820 LINC00477Q96M19 166 aa14.57□□□□□ -0.08
CAPN1-226ENST00000533820 F5H697 171 aa14.57□□□□□ -0.08
CAPN1-226ENST00000533820 DUSP14O95147 198 aaKnown RBP14.57□□□□□ -0.08
CAPN1-226ENST00000533820 ORMDL2Q53FV1 153 aa14.57□□□□□ -0.08
CAPN1-226ENST00000533820 PRADC1Q9BSG0 188 aa14.57□□□□□ -0.08
CAPN1-226ENST00000533820 H3BUX3 64 aa14.56□□□□□ -0.08
CAPN1-226ENST00000533820 HLA-DRB4P13762 266 aa14.56□□□□□ -0.08
CAPN1-226ENST00000533820 BAALCQ8WXS3 180 aa14.56□□□□□ -0.08
CAPN1-226ENST00000533820 HLA-DRB4X5D2U9 266 aa14.56□□□□□ -0.08
CAPN1-226ENST00000533820 ZANQ9Y493 2812 aa14.56□□□□□ -0.08
CAPN1-226ENST00000533820 MYMXA0A1B0GTQ4 84 aa14.56□□□□□ -0.08
CAPN1-226ENST00000533820 RHPN1-AS1Q9BWJ2 59 aa14.56□□□□□ -0.08
CAPN1-226ENST00000533820 CSMD2Q7Z408 3487 aa14.56□□□□□ -0.08
CAPN1-226ENST00000533820 LOC107984640A0A0U1RRK4 108 aa14.55□□□□□ -0.08
CAPN1-226ENST00000533820 IGHV4-39P01824 125 aa14.55□□□□□ -0.08
CAPN1-226ENST00000533820 MRPL23Q16540 153 aaKnown RBP14.55□□□□□ -0.08
CAPN1-226ENST00000533820 PSMG4Q5JS54 123 aa14.55□□□□□ -0.08
CAPN1-226ENST00000533820 MORN3Q6PF18 240 aaPredicted RBP14.55□□□□□ -0.08
CAPN1-226ENST00000533820 TOMM6Q96B49 74 aa14.55□□□□□ -0.08
CAPN1-226ENST00000533820 RNASE3P12724 160 aaKnown RBP14.55□□□□□ -0.08
CAPN1-226ENST00000533820 FAM74A4Q5TZK3 123 aa14.55□□□□□ -0.08
CAPN1-226ENST00000533820 TEN1Q86WV5 123 aa14.55□□□□□ -0.08
CAPN1-226ENST00000533820 NEXN-AS1Q8NBZ9 246 aa14.55□□□□□ -0.08
CAPN1-226ENST00000533820 CUBNO60494 3623 aa14.55□□□□□ -0.08
CAPN1-226ENST00000533820 FAM223BA6NKX1 122 aa14.55□□□□□ -0.08
CAPN1-226ENST00000533820 ZNF815PA8K554 130 aa14.55□□□□□ -0.08
CAPN1-226ENST00000533820 SLC25A16P16260 332 aa14.55□□□□□ -0.08
CAPN1-226ENST00000533820 FAM223AQ8IWN6 122 aa14.55□□□□□ -0.08
CAPN1-226ENST00000533820 PLEKHB2Q96CS7 222 aa14.55□□□□□ -0.08
CAPN1-226ENST00000533820 IGHV4-61A0A0C4DH41 118 aa14.54□□□□□ -0.08
CAPN1-226ENST00000533820 RPL39P62891 51 aaKnown RBP14.54□□□□□ -0.08
CAPN1-226ENST00000533820 C5orf47Q569G3 176 aa14.54□□□□□ -0.08
CAPN1-226ENST00000533820 IGHV1-69DA0A0B4J2H0 117 aa14.54□□□□□ -0.08
CAPN1-226ENST00000533820 IGHV1-69P01742 117 aa14.54□□□□□ -0.08
CAPN1-226ENST00000533820 LGALS1P09382 135 aaKnown RBP14.54□□□□□ -0.08
CAPN1-226ENST00000533820 OVOL1O14753 267 aa14.53□□□□□ -0.08
CAPN1-226ENST00000533820 SRSF9Q13242 221 aaKnown RBP eCLIP14.53□□□□□ -0.08
CAPN1-226ENST00000533820 RNF223E7ERA6 249 aa14.53□□□□□ -0.08
CAPN1-226ENST00000533820 CACNA1AO00555 2505 aa14.53□□□□□ -0.08
CAPN1-226ENST00000533820 TRBV7-3A0A075B6L6 115 aa14.52□□□□□ -0.08
CAPN1-226ENST00000533820 TRAV12-3A0A0B4J271 114 aa14.52□□□□□ -0.08
CAPN1-226ENST00000533820 LINC01549A6NIU2 74 aa14.52□□□□□ -0.08
CAPN1-226ENST00000533820 SOCS3O14543 225 aa14.52□□□□□ -0.08
CAPN1-226ENST00000533820 HOXA3O43365 443 aaPredicted RBP14.52□□□□□ -0.08
CAPN1-226ENST00000533820 ANKRD29Q8N6D5 301 aa14.52□□□□□ -0.08
CAPN1-226ENST00000533820 NOTCH3Q9UM47 2321 aa14.52□□□□□ -0.08
CAPN1-226ENST00000533820 NDUFA4O00483 81 aa14.52□□□□□ -0.08
CAPN1-226ENST00000533820 MYO18BQ8IUG5 2567 aa14.52□□□□□ -0.09
CAPN1-226ENST00000533820 CFAP46Q8IYW2 2715 aa14.52□□□□□ -0.09
CAPN1-226ENST00000533820 KLK9Q2XQG4 91 aa14.51□□□□□ -0.09
CAPN1-226ENST00000533820 KLK9Q9UKQ9 250 aa14.51□□□□□ -0.09
CAPN1-226ENST00000533820 TP53TG1Q9Y2A0 90 aa14.51□□□□□ -0.09
CAPN1-226ENST00000533820 TRAV12-1A0A0B4J245 112 aa14.51□□□□□ -0.09
CAPN1-226ENST00000533820 CD7P09564 240 aa14.5□□□□□ -0.09
CAPN1-226ENST00000533820 LENEPQ9Y5L5 61 aa14.5□□□□□ -0.09
CAPN1-226ENST00000533820 USP9XQ93008 2570 aaPredicted RBP14.5□□□□□ -0.09
CAPN1-226ENST00000533820 TRAV12-2A0A075B6T6 113 aa14.5□□□□□ -0.09
CAPN1-226ENST00000533820 C19orf54Q5BKX5 351 aa14.5□□□□□ -0.09
CAPN1-226ENST00000533820 PKD1L2Q7Z442 2459 aa14.5□□□□□ -0.09
CAPN1-226ENST00000533820 A4D1N5 150 aa14.5□□□□□ -0.09
CAPN1-226ENST00000533820 UCNP55089 124 aa14.5□□□□□ -0.09
CAPN1-226ENST00000533820 ZNF256Q9Y2P7 627 aaPredicted RBP14.5□□□□□ -0.09
CAPN1-226ENST00000533820 C11orf86A6NJI1 115 aa14.49□□□□□ -0.09
CAPN1-226ENST00000533820 LINC00694P0DN24 101 aa14.49□□□□□ -0.09
CAPN1-226ENST00000533820 FAM208BQ5VWN6 2430 aa14.49□□□□□ -0.09
CAPN1-226ENST00000533820 A8MWV9 139 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms