RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 LRP4O75096 1905 aa8.7□□□□□ -1.02
AMBRA1-211ENST00000533727 CRYBA4P53673 196 aa8.7□□□□□ -1.02
AMBRA1-211ENST00000533727 NUPR1O60356 82 aa8.7□□□□□ -1.02
AMBRA1-211ENST00000533727 IGHV3-16A0A0C4DH30 117 aa8.7□□□□□ -1.02
AMBRA1-211ENST00000533727 PCP2Q8IVA1 136 aa8.7□□□□□ -1.02
AMBRA1-211ENST00000533727 K7EN84 100 aa8.69□□□□□ -1.02
AMBRA1-211ENST00000533727 HIST2H2BCQ6DN03 193 aa8.69□□□□□ -1.02
AMBRA1-211ENST00000533727 Q6ZSV7 163 aa8.69□□□□□ -1.02
AMBRA1-211ENST00000533727 APRG1Q8IVJ8 170 aa8.69□□□□□ -1.02
AMBRA1-211ENST00000533727 SDHAF1A6NFY7 115 aa8.69□□□□□ -1.02
AMBRA1-211ENST00000533727 RITA1Q96K30 269 aa8.69□□□□□ -1.02
AMBRA1-211ENST00000533727 IGLL5B9A064 214 aa8.69□□□□□ -1.02
AMBRA1-211ENST00000533727 SMIM2Q9BVW6 85 aa8.69□□□□□ -1.02
AMBRA1-211ENST00000533727 C1orf43Q9BWL3 253 aa8.69□□□□□ -1.02
AMBRA1-211ENST00000533727 DSCAMO60469 2012 aa8.69□□□□□ -1.02
AMBRA1-211ENST00000533727 TMEM258P61165 79 aa8.69□□□□□ -1.02
AMBRA1-211ENST00000533727 C20orf78Q9BR46 151 aa8.69□□□□□ -1.02
AMBRA1-211ENST00000533727 NDUFA12Q9UI09 145 aa8.69□□□□□ -1.02
AMBRA1-211ENST00000533727 HAMPP81172 84 aa8.68□□□□□ -1.02
AMBRA1-211ENST00000533727 J3QQQ9 107 aa8.68□□□□□ -1.02
AMBRA1-211ENST00000533727 CFC1BP0CG36 223 aa8.68□□□□□ -1.02
AMBRA1-211ENST00000533727 CFC1P0CG37 223 aa8.68□□□□□ -1.02
AMBRA1-211ENST00000533727 RBM3P98179 157 aaKnown RBP8.68□□□□□ -1.02
AMBRA1-211ENST00000533727 DYNAPQ8N1N2 210 aa8.68□□□□□ -1.02
AMBRA1-211ENST00000533727 CHD3Q12873 2000 aaKnown RBP8.68□□□□□ -1.02
AMBRA1-211ENST00000533727 TRAV26-1A0A087WT03 109 aa8.68□□□□□ -1.02
AMBRA1-211ENST00000533727 TAX1BP3O14907 124 aa8.68□□□□□ -1.02
AMBRA1-211ENST00000533727 SPATA25Q9BR10 227 aa8.68□□□□□ -1.02
AMBRA1-211ENST00000533727 TM2D2Q9BX73 214 aa8.68□□□□□ -1.02
AMBRA1-211ENST00000533727 K7EMI3 77 aa8.67□□□□□ -1.02
AMBRA1-211ENST00000533727 NDUFA7O95182 113 aa8.67□□□□□ -1.02
AMBRA1-211ENST00000533727 PSMG3-AS1Q96PY0 264 aa8.67□□□□□ -1.02
AMBRA1-211ENST00000533727 LTAP01374 205 aa8.67□□□□□ -1.02
AMBRA1-211ENST00000533727 DYSFO75923 2080 aa8.67□□□□□ -1.02
AMBRA1-211ENST00000533727 SMIM9A6NGZ8 99 aa8.67□□□□□ -1.02
AMBRA1-211ENST00000533727 ANGP03950 147 aaKnown RBP8.67□□□□□ -1.02
AMBRA1-211ENST00000533727 RBMY1FQ15415 496 aaKnown RBP8.67□□□□□ -1.02
AMBRA1-211ENST00000533727 PRSS29PA6NIE9 313 aa8.66□□□□□ -1.02
AMBRA1-211ENST00000533727 ACYP1P07311 99 aa8.66□□□□□ -1.02
AMBRA1-211ENST00000533727 F6UB75 175 aa8.66□□□□□ -1.02
AMBRA1-211ENST00000533727 F8WEM9 126 aa8.66□□□□□ -1.02
AMBRA1-211ENST00000533727 WFDC2Q14508 124 aa8.66□□□□□ -1.02
AMBRA1-211ENST00000533727 TEN1Q86WV5 123 aa8.66□□□□□ -1.02
AMBRA1-211ENST00000533727 TMEM61Q8N0U2 210 aa8.66□□□□□ -1.02
AMBRA1-211ENST00000533727 SRCAPQ6ZRS2 3230 aa8.66□□□□□ -1.02
AMBRA1-211ENST00000533727 LINC01545Q5VT33 79 aa8.66□□□□□ -1.02
AMBRA1-211ENST00000533727 ZC2HC1AQ96GY0 325 aa8.66□□□□□ -1.02
AMBRA1-211ENST00000533727 ANKRD39Q53RE8 183 aa8.65□□□□□ -1.02
AMBRA1-211ENST00000533727 FANCD2OSQ96PS1 177 aa8.65□□□□□ -1.02
AMBRA1-211ENST00000533727 SCRT2Q9NQ03 307 aa8.65□□□□□ -1.02
AMBRA1-211ENST00000533727 CSPG4Q6UVK1 2322 aa8.65□□□□□ -1.02
AMBRA1-211ENST00000533727 G3V4G9 280 aa8.65□□□□□ -1.02
AMBRA1-211ENST00000533727 SPRY2O43597 315 aa8.65□□□□□ -1.02
AMBRA1-211ENST00000533727 FREM1Q5H8C1 2179 aa8.65□□□□□ -1.02
AMBRA1-211ENST00000533727 TRAV26-2A0A0B4J265 109 aa8.65□□□□□ -1.03
AMBRA1-211ENST00000533727 J3KT08 172 aa8.65□□□□□ -1.03
AMBRA1-211ENST00000533727 MED14OSP0DP75 135 aa8.65□□□□□ -1.03
AMBRA1-211ENST00000533727 C9orf47Q6ZRZ4 202 aa8.65□□□□□ -1.03
AMBRA1-211ENST00000533727 ATP6V0E2Q8NHE4 81 aa8.65□□□□□ -1.03
AMBRA1-211ENST00000533727 LY6LH3BQJ8 138 aa8.64□□□□□ -1.03
AMBRA1-211ENST00000533727 CRLF1O75462 422 aa8.64□□□□□ -1.03
AMBRA1-211ENST00000533727 NKAPP1Q8N9T2 125 aa8.64□□□□□ -1.03
AMBRA1-211ENST00000533727 A0A0J9YY99 117 aa8.64□□□□□ -1.03
AMBRA1-211ENST00000533727 DEFB135Q30KP9 77 aa8.64□□□□□ -1.03
AMBRA1-211ENST00000533727 PLA2G2EQ9NZK7 142 aa8.64□□□□□ -1.03
AMBRA1-211ENST00000533727 MED12LQ86YW9 2145 aa8.64□□□□□ -1.03
AMBRA1-211ENST00000533727 HERVK_113P63121 156 aa8.63□□□□□ -1.03
AMBRA1-211ENST00000533727 ASPHD1Q5U4P2 390 aa8.63□□□□□ -1.03
AMBRA1-211ENST00000533727 DAZ2Q13117 558 aaKnown RBP8.63□□□□□ -1.03
AMBRA1-211ENST00000533727 DAZ4Q86SG3 579 aaKnown RBP8.63□□□□□ -1.03
AMBRA1-211ENST00000533727 ODF3Q96PU9 254 aa8.63□□□□□ -1.03
AMBRA1-211ENST00000533727 DAZ3Q9NR90 486 aaKnown RBP8.63□□□□□ -1.03
AMBRA1-211ENST00000533727 IGKV2D-24A0A075B6R9 120 aa8.63□□□□□ -1.03
AMBRA1-211ENST00000533727 K7EQD1 137 aa8.63□□□□□ -1.03
AMBRA1-211ENST00000533727 F8W735 103 aaPredicted RBP8.63□□□□□ -1.03
AMBRA1-211ENST00000533727 GYPEP15421 78 aa8.63□□□□□ -1.03
AMBRA1-211ENST00000533727 TRAV13-2A0A0B4J235 113 aa8.62□□□□□ -1.03
AMBRA1-211ENST00000533727 LINC00173Q6ZV60 143 aa8.62□□□□□ -1.03
AMBRA1-211ENST00000533727 TMEM263Q8WUH6 116 aaKnown RBP8.62□□□□□ -1.03
AMBRA1-211ENST00000533727 MAP6D1Q9H9H5 199 aa8.62□□□□□ -1.03
AMBRA1-211ENST00000533727 RS1O15537 224 aa8.62□□□□□ -1.03
AMBRA1-211ENST00000533727 FOXI1Q12951 378 aa8.62□□□□□ -1.03
AMBRA1-211ENST00000533727 LINC01006Q8NI28 216 aa8.62□□□□□ -1.03
AMBRA1-211ENST00000533727 C17orf77Q96MU5 243 aa8.62□□□□□ -1.03
AMBRA1-211ENST00000533727 A0A0J9YX75 114 aa8.62□□□□□ -1.03
AMBRA1-211ENST00000533727 TRAV12-1A0A0B4J245 112 aa8.61□□□□□ -1.03
AMBRA1-211ENST00000533727 ATOX1O00244 68 aa8.61□□□□□ -1.03
AMBRA1-211ENST00000533727 FXYD2P54710 66 aa8.61□□□□□ -1.03
AMBRA1-211ENST00000533727 HIGD1BQ9P298 99 aa8.61□□□□□ -1.03
AMBRA1-211ENST00000533727 NAV3Q8IVL0 2385 aa8.61□□□□□ -1.03
AMBRA1-211ENST00000533727 TINCRA0A1B0GVN0 87 aa8.61□□□□□ -1.03
AMBRA1-211ENST00000533727 RPL32P62910 135 aaKnown RBP8.61□□□□□ -1.03
AMBRA1-211ENST00000533727 C11orf45Q8TAV5 145 aa8.61□□□□□ -1.03
AMBRA1-211ENST00000533727 PFN2P35080 140 aa8.61□□□□□ -1.03
AMBRA1-211ENST00000533727 DEFB114Q30KQ6 69 aa8.61□□□□□ -1.03
AMBRA1-211ENST00000533727 ZNF702PQ9H963 129 aa8.61□□□□□ -1.03
AMBRA1-211ENST00000533727 TNRC6AQ8NDV7 1962 aaKnown RBP8.61□□□□□ -1.03
AMBRA1-211ENST00000533727 IGKV1OR2-108A0A075B7D4 117 aa8.6□□□□□ -1.03
AMBRA1-211ENST00000533727 BAALC-AS2P0C853 105 aa8.6□□□□□ -1.03
AMBRA1-211ENST00000533727 FAM236AA0A1B0GUQ0 79 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms