RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 TEX22C9J3V5 150 aa5.43□□□□□ -1.54
CTNND1-236ENST00000533667 E9PLD3 99 aa5.43□□□□□ -1.54
CTNND1-236ENST00000533667 GATA1P15976 413 aaPredicted RBP5.43□□□□□ -1.54
CTNND1-236ENST00000533667 C9orf66Q5T8R8 295 aa5.43□□□□□ -1.54
CTNND1-236ENST00000533667 ASPHD1Q5U4P2 390 aa5.43□□□□□ -1.54
CTNND1-236ENST00000533667 C5orf56Q8N8D9 126 aa5.43□□□□□ -1.54
CTNND1-236ENST00000533667 H3BT86 120 aa5.43□□□□□ -1.54
CTNND1-236ENST00000533667 XCL1P47992 114 aa5.43□□□□□ -1.54
CTNND1-236ENST00000533667 RNASE13Q5GAN3 156 aaKnown RBP5.43□□□□□ -1.54
CTNND1-236ENST00000533667 GPHB5Q86YW7 130 aa5.43□□□□□ -1.54
CTNND1-236ENST00000533667 GTSF1Q8WW33 167 aa5.43□□□□□ -1.54
CTNND1-236ENST00000533667 RPL39LQ96EH5 51 aaKnown RBP5.43□□□□□ -1.54
CTNND1-236ENST00000533667 MALRD1Q5VYJ5 2156 aa5.42□□□□□ -1.54
CTNND1-236ENST00000533667 CADP27708 2225 aa5.42□□□□□ -1.54
CTNND1-236ENST00000533667 GPR179Q6PRD1 2367 aa5.42□□□□□ -1.54
CTNND1-236ENST00000533667 ICOSQ9Y6W8 199 aa5.42□□□□□ -1.54
CTNND1-236ENST00000533667 C11orf86A6NJI1 115 aa5.42□□□□□ -1.54
CTNND1-236ENST00000533667 NUPR1O60356 82 aa5.42□□□□□ -1.54
CTNND1-236ENST00000533667 LINC00694P0DN24 101 aa5.42□□□□□ -1.54
CTNND1-236ENST00000533667 DAZAP2Q15038 168 aaPredicted RBP5.42□□□□□ -1.54
CTNND1-236ENST00000533667 SPRNQ5BIV9 151 aa5.42□□□□□ -1.54
CTNND1-236ENST00000533667 HRCT1Q6UXD1 115 aa5.42□□□□□ -1.54
CTNND1-236ENST00000533667 EML6Q6ZMW3 1958 aa5.42□□□□□ -1.54
CTNND1-236ENST00000533667 IGLV2-14P01704 120 aa5.42□□□□□ -1.54
CTNND1-236ENST00000533667 FUSP35637 526 aaKnown RBP eCLIP5.42□□□□□ -1.54
CTNND1-236ENST00000533667 FAM19A5Q7Z5A7 132 aaPredicted RBP5.42□□□□□ -1.54
CTNND1-236ENST00000533667 MLST8Q9BVC4 326 aa5.42□□□□□ -1.54
CTNND1-236ENST00000533667 PRORYQ9H606 182 aa5.42□□□□□ -1.54
CTNND1-236ENST00000533667 CCDC179H3BU77 68 aa5.42□□□□□ -1.54
CTNND1-236ENST00000533667 MUSTN1Q8IVN3 82 aa5.42□□□□□ -1.54
CTNND1-236ENST00000533667 VSIG2Q96IQ7 327 aa5.42□□□□□ -1.54
CTNND1-236ENST00000533667 SND1-IT1Q9HBX3 110 aa5.42□□□□□ -1.54
CTNND1-236ENST00000533667 CREBBPQ92793 2442 aa5.41□□□□□ -1.54
CTNND1-236ENST00000533667 TRAV4A0A0B4J268 109 aa5.41□□□□□ -1.54
CTNND1-236ENST00000533667 IGHV4-61A0A0C4DH41 118 aa5.41□□□□□ -1.54
CTNND1-236ENST00000533667 A0A0J9YXV3 536 aa5.41□□□□□ -1.54
CTNND1-236ENST00000533667 C19orf71A6NCJ1 209 aa5.41□□□□□ -1.54
CTNND1-236ENST00000533667 MRPS36P82909 103 aaKnown RBP5.41□□□□□ -1.54
CTNND1-236ENST00000533667 ODF3L1Q8IXM7 274 aa5.41□□□□□ -1.54
CTNND1-236ENST00000533667 C10orf105Q8TEF2 133 aa5.41□□□□□ -1.54
CTNND1-236ENST00000533667 ZMAT4Q9H898 229 aa5.41□□□□□ -1.54
CTNND1-236ENST00000533667 DEFB113Q30KQ7 82 aa5.41□□□□□ -1.54
CTNND1-236ENST00000533667 LINC01620Q4KN68 170 aa5.41□□□□□ -1.54
CTNND1-236ENST00000533667 SPATA12Q7Z6I5 190 aa5.41□□□□□ -1.54
CTNND1-236ENST00000533667 PIFOQ8TCI5 191 aa5.41□□□□□ -1.54
CTNND1-236ENST00000533667 COX7B2Q8TF08 81 aa5.41□□□□□ -1.54
CTNND1-236ENST00000533667 CACNA1HO95180 2353 aa5.41□□□□□ -1.54
CTNND1-236ENST00000533667 COX7A2LO14548 114 aa5.41□□□□□ -1.54
CTNND1-236ENST00000533667 NDUFC1O43677 76 aa5.41□□□□□ -1.54
CTNND1-236ENST00000533667 FBXL19-AS1Q494R0 122 aa5.41□□□□□ -1.54
CTNND1-236ENST00000533667 OPRPNQ99935 248 aaPredicted RBP5.41□□□□□ -1.54
CTNND1-236ENST00000533667 MSRB1Q9NZV6 116 aa5.41□□□□□ -1.54
CTNND1-236ENST00000533667 P0C879 139 aa5.4□□□□□ -1.54
CTNND1-236ENST00000533667 SPART-AS1P0CW21 52 aa5.4□□□□□ -1.54
CTNND1-236ENST00000533667 PSMB8P28062 276 aa5.4□□□□□ -1.54
CTNND1-236ENST00000533667 LINC00173Q6ZV60 143 aa5.4□□□□□ -1.54
CTNND1-236ENST00000533667 RITA1Q96K30 269 aa5.4□□□□□ -1.54
CTNND1-236ENST00000533667 SPRY4Q9C004 299 aa5.4□□□□□ -1.54
CTNND1-236ENST00000533667 LINC00574Q9H8X3 128 aa5.4□□□□□ -1.54
CTNND1-236ENST00000533667 TRBV7-3A0A075B6L6 115 aa5.4□□□□□ -1.54
CTNND1-236ENST00000533667 IGKV2D-24A0A075B6R9 120 aa5.4□□□□□ -1.54
CTNND1-236ENST00000533667 JMJD7-PLA2G4BH0Y9G9 81 aa5.4□□□□□ -1.54
CTNND1-236ENST00000533667 BAALCQ8WXS3 180 aa5.4□□□□□ -1.54
CTNND1-236ENST00000533667 ZNF503Q96F45 646 aa5.4□□□□□ -1.54
CTNND1-236ENST00000533667 PLXNB3Q9ULL4 1909 aa5.4□□□□□ -1.54
CTNND1-236ENST00000533667 COX7CP15954 63 aa5.4□□□□□ -1.55
CTNND1-236ENST00000533667 WT1P19544 449 aaPredicted RBP5.4□□□□□ -1.55
CTNND1-236ENST00000533667 SIRPDQ9H106 197 aa5.4□□□□□ -1.55
CTNND1-236ENST00000533667 IGKV1OR2-108A0A075B7D4 117 aa5.4□□□□□ -1.55
CTNND1-236ENST00000533667 TRBV10-2A0A0K0K1G8 114 aa5.4□□□□□ -1.55
CTNND1-236ENST00000533667 IGHV4-38-2P0DP08 117 aa5.4□□□□□ -1.55
CTNND1-236ENST00000533667 GRNP28799 593 aaKnown RBP5.4□□□□□ -1.55
CTNND1-236ENST00000533667 GTF3C1Q12789 2109 aa5.4□□□□□ -1.55
CTNND1-236ENST00000533667 A0A096LPF7 62 aa5.39□□□□□ -1.55
CTNND1-236ENST00000533667 ETDCA0A1B0GVM5 59 aa5.39□□□□□ -1.55
CTNND1-236ENST00000533667 C2orf70A6NJV1 201 aa5.39□□□□□ -1.55
CTNND1-236ENST00000533667 GYPEP15421 78 aa5.39□□□□□ -1.55
CTNND1-236ENST00000533667 SLURP1P55000 103 aa5.39□□□□□ -1.55
CTNND1-236ENST00000533667 C5orf38Q86SI9 138 aa5.39□□□□□ -1.55
CTNND1-236ENST00000533667 NOTCH4Q99466 2003 aa5.39□□□□□ -1.55
CTNND1-236ENST00000533667 IGLC6P0CF74 106 aa5.39□□□□□ -1.55
CTNND1-236ENST00000533667 FXYD2P54710 66 aa5.39□□□□□ -1.55
CTNND1-236ENST00000533667 CLPSL2Q6UWE3 100 aa5.39□□□□□ -1.55
CTNND1-236ENST00000533667 Q8N1Y9 231 aa5.39□□□□□ -1.55
CTNND1-236ENST00000533667 CAMK2N2Q96S95 79 aa5.39□□□□□ -1.55
CTNND1-236ENST00000533667 UBE2BP63146 152 aa5.39□□□□□ -1.55
CTNND1-236ENST00000533667 MRPL36Q9P0J6 103 aaKnown RBP5.39□□□□□ -1.55
CTNND1-236ENST00000533667 CACNA1GO43497 2377 aa5.39□□□□□ -1.55
CTNND1-236ENST00000533667 DENND4CQ5VZ89 1909 aa5.39□□□□□ -1.55
CTNND1-236ENST00000533667 DOCK10Q96BY6 2186 aa5.39□□□□□ -1.55
CTNND1-236ENST00000533667 HIST2H2BCQ6DN03 193 aa5.39□□□□□ -1.55
CTNND1-236ENST00000533667 Q8N7P7 452 aa5.39□□□□□ -1.55
CTNND1-236ENST00000533667 NCKAP5O14513 1909 aa5.39□□□□□ -1.55
CTNND1-236ENST00000533667 TNRC6AQ8NDV7 1962 aaKnown RBP5.39□□□□□ -1.55
CTNND1-236ENST00000533667 IGHV4-30-2A0A087WSY4 118 aa5.38□□□□□ -1.55
CTNND1-236ENST00000533667 A0A0J9YY99 117 aa5.38□□□□□ -1.55
CTNND1-236ENST00000533667 TRBV10-1A0A0K0K1A3 114 aa5.38□□□□□ -1.55
CTNND1-236ENST00000533667 A0A1B0GXF2 115 aa5.38□□□□□ -1.55
CTNND1-236ENST00000533667 PRAC2D3DTV9 90 aa5.38□□□□□ -1.55
CTNND1-236ENST00000533667 CGB3P0DN86 165 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms