RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 RUSC1-AS1Q66K80 236 aa4.14□□□□□ -1.75
CKAP5-212ENST00000533413 GAGE2AQ6NT46 116 aa4.14□□□□□ -1.75
CKAP5-212ENST00000533413 LYZL1Q6UWQ5 148 aa4.14□□□□□ -1.75
CKAP5-212ENST00000533413 LYPD1Q8N2G4 141 aa4.14□□□□□ -1.75
CKAP5-212ENST00000533413 WFDC11Q8NEX6 87 aa4.14□□□□□ -1.75
CKAP5-212ENST00000533413 BRK1Q8WUW1 75 aa4.14□□□□□ -1.75
CKAP5-212ENST00000533413 GAGE2DQ9UEU5 116 aa4.14□□□□□ -1.75
CKAP5-212ENST00000533413 PYGO1Q9Y3Y4 419 aa4.14□□□□□ -1.75
CKAP5-212ENST00000533413 SPTAN1Q13813 2472 aaKnown RBP4.14□□□□□ -1.75
CKAP5-212ENST00000533413 A0A1W2PPR1 153 aa4.14□□□□□ -1.75
CKAP5-212ENST00000533413 RBMY1BA6NDE4 496 aaKnown RBP4.14□□□□□ -1.75
CKAP5-212ENST00000533413 RBMY1EA6NEQ0 496 aaKnown RBP4.14□□□□□ -1.75
CKAP5-212ENST00000533413 NDUFS7O75251 213 aa4.14□□□□□ -1.75
CKAP5-212ENST00000533413 RBMY1DP0C7P1 496 aaKnown RBP4.14□□□□□ -1.75
CKAP5-212ENST00000533413 RBMY1A1P0DJD3 496 aaKnown RBP4.14□□□□□ -1.75
CKAP5-212ENST00000533413 HERVK_113P63121 156 aa4.14□□□□□ -1.75
CKAP5-212ENST00000533413 HES1Q14469 280 aa4.14□□□□□ -1.75
CKAP5-212ENST00000533413 FAM104BQ5XKR9 115 aa4.14□□□□□ -1.75
CKAP5-212ENST00000533413 AMN1Q8IY45 258 aa4.14□□□□□ -1.75
CKAP5-212ENST00000533413 SHANK2-AS3Q9BTD1 123 aa4.14□□□□□ -1.75
CKAP5-212ENST00000533413 FAM30AQ9NZY2 134 aa4.14□□□□□ -1.75
CKAP5-212ENST00000533413 SPTBN1Q01082 2364 aaKnown RBP4.14□□□□□ -1.75
CKAP5-212ENST00000533413 EIF4EBP3O60516 100 aaPredicted RBP4.13□□□□□ -1.75
CKAP5-212ENST00000533413 APOMO95445 188 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 EFNA4P52798 201 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 FXYD2P54710 66 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 FXYD7P58549 80 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 PAX8Q06710 450 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 LOXL1Q08397 574 aaPredicted RBP4.13□□□□□ -1.75
CKAP5-212ENST00000533413 TWIST1Q15672 202 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 ZNF493Q6ZR52 646 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 AKAP9Q99996 3911 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 ANKRD17O75179 2603 aaKnown RBP4.13□□□□□ -1.75
CKAP5-212ENST00000533413 HECTD1Q9ULT8 2610 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 TANC2Q9HCD6 1990 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 DSCAMO60469 2012 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 AVPP01185 164 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 IL4P05112 153 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 PRSS1P07477 247 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 IGHV1-8P0DP01 117 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 PRB4P10163 310 aaPredicted RBP4.13□□□□□ -1.75
CKAP5-212ENST00000533413 SLC25A16P16260 332 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 C12orf74Q32Q52 190 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 PVRIGQ6DKI7 326 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 LYPD2Q6UXB3 125 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 PPDPFLQ8WWR9 84 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 C17orf77Q96MU5 243 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 DYNLRB1Q9NP97 96 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 COL12A1Q99715 3063 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 APCP25054 2843 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 KNCNA6PVL3 124 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 TMEM262E9PQX1 116 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 M0R3E3 92 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 ASIPP42127 132 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 CFHR3Q02985 330 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 MRPL51Q4U2R6 128 aaKnown RBP4.13□□□□□ -1.75
CKAP5-212ENST00000533413 TMEM155Q4W5P6 130 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 FAM19A4Q96LR4 140 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 SPANXCQ9NY87 97 aa4.13□□□□□ -1.75
CKAP5-212ENST00000533413 ABCA1O95477 2261 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 NAV3Q8IVL0 2385 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 PDZD2O15018 2839 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 A0A096LNJ9 63 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 H3BRN7 92 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 I3L2K1 104 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 SH2D1AO60880 128 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 EGR2P11161 476 aaPredicted RBP4.12□□□□□ -1.75
CKAP5-212ENST00000533413 IFITM1P13164 125 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 CRIP1P50238 77 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 RRN3P1Q2M238 152 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 TTC32Q5I0X7 151 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 PCP2Q8IVA1 136 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 C8orf49Q96NF6 230 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 C19orf73Q9NVV2 129 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 U3KQK5 164 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 HRNRQ86YZ3 2850 aaPredicted RBP4.12□□□□□ -1.75
CKAP5-212ENST00000533413 ARFGEF3Q5TH69 2177 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 IGHV1-3A0A0C4DH29 117 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 OOSP1A8MZH6 123 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 IGKV1-17P01599 117 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 COX7A1P24310 79 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 MRGPRG-AS1Q2M3A8 158 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 CEND1Q8N111 149 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 PLCE1Q9P212 2302 aa4.12□□□□□ -1.75
CKAP5-212ENST00000533413 LINC01546A6NGU7 62 aa4.11□□□□□ -1.75
CKAP5-212ENST00000533413 LY6LH3BQJ8 138 aa4.11□□□□□ -1.75
CKAP5-212ENST00000533413 NPYP01303 97 aa4.11□□□□□ -1.75
CKAP5-212ENST00000533413 TEN1Q86WV5 123 aa4.11□□□□□ -1.75
CKAP5-212ENST00000533413 TMEM158Q8WZ71 300 aa4.11□□□□□ -1.75
CKAP5-212ENST00000533413 DKK2Q9UBU2 259 aa4.11□□□□□ -1.75
CKAP5-212ENST00000533413 CELSR2Q9HCU4 2923 aa4.11□□□□□ -1.75
CKAP5-212ENST00000533413 ADARB2-AS1A8MUL3 147 aa4.11□□□□□ -1.75
CKAP5-212ENST00000533413 DPM2O94777 84 aa4.11□□□□□ -1.75
CKAP5-212ENST00000533413 IGHV4-39P01824 125 aa4.11□□□□□ -1.75
CKAP5-212ENST00000533413 ZNF688P0C7X2 276 aa4.11□□□□□ -1.75
CKAP5-212ENST00000533413 PDE6HQ13956 83 aa4.11□□□□□ -1.75
CKAP5-212ENST00000533413 NSUN5P1Q3KNT7 163 aa4.11□□□□□ -1.75
CKAP5-212ENST00000533413 KRTAP1-3Q8IUG1 177 aa4.11□□□□□ -1.75
CKAP5-212ENST00000533413 ZNF491Q8N8L2 437 aa4.11□□□□□ -1.75
CKAP5-212ENST00000533413 CTSZQ9UBR2 303 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms