RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 A0A1B0GXF2 115 aa7.59□□□□□ -1.19
SOX6-213ENST00000530378 NXPH4O95158 308 aa7.59□□□□□ -1.19
SOX6-213ENST00000530378 FAM210BQ96KR6 192 aa7.59□□□□□ -1.19
SOX6-213ENST00000530378 AP1S3Q96PC3 154 aa7.59□□□□□ -1.19
SOX6-213ENST00000530378 CNFNQ9BYD5 112 aa7.59□□□□□ -1.19
SOX6-213ENST00000530378 TRAV26-2A0A0B4J265 109 aa7.57□□□□□ -1.2
SOX6-213ENST00000530378 HTN3P15516 51 aa7.57□□□□□ -1.2
SOX6-213ENST00000530378 NANOS2P60321 138 aaKnown RBP7.57□□□□□ -1.2
SOX6-213ENST00000530378 DAD1P61803 113 aa7.57□□□□□ -1.2
SOX6-213ENST00000530378 CFAP126Q5VTH2 177 aa7.57□□□□□ -1.2
SOX6-213ENST00000530378 ATP5L2Q7Z4Y8 100 aa7.57□□□□□ -1.2
SOX6-213ENST00000530378 AMN1Q8IY45 258 aa7.57□□□□□ -1.2
SOX6-213ENST00000530378 POM121L12Q8N7R1 296 aa7.57□□□□□ -1.2
SOX6-213ENST00000530378 ZNF479Q96JC4 524 aa7.57□□□□□ -1.2
SOX6-213ENST00000530378 C11orf68Q9H3H3 251 aaKnown RBP7.57□□□□□ -1.2
SOX6-213ENST00000530378 TRBV24-1A0A075B6N3 115 aa7.57□□□□□ -1.2
SOX6-213ENST00000530378 IGHV4-4A0A075B6R2 117 aa7.57□□□□□ -1.2
SOX6-213ENST00000530378 TRAV9-1A0A075B6T8 112 aa7.57□□□□□ -1.2
SOX6-213ENST00000530378 COLCA2A8K830 154 aa7.57□□□□□ -1.2
SOX6-213ENST00000530378 ZNF56Q15929 161 aa7.57□□□□□ -1.2
SOX6-213ENST00000530378 OR4C5Q8NGB2 326 aa7.57□□□□□ -1.2
SOX6-213ENST00000530378 RASL10AQ92737 203 aa7.57□□□□□ -1.2
SOX6-213ENST00000530378 FRZBQ92765 325 aa7.57□□□□□ -1.2
SOX6-213ENST00000530378 TMA7Q9Y2S6 64 aaKnown RBP7.57□□□□□ -1.2
SOX6-213ENST00000530378 LYRM9A8MSI8 78 aa7.56□□□□□ -1.2
SOX6-213ENST00000530378 F5H697 171 aa7.56□□□□□ -1.2
SOX6-213ENST00000530378 SMKR1H3BMG3 65 aa7.56□□□□□ -1.2
SOX6-213ENST00000530378 NCR2O95944 276 aa7.56□□□□□ -1.2
SOX6-213ENST00000530378 TRGC1P0CF51 173 aa7.56□□□□□ -1.2
SOX6-213ENST00000530378 SPART-AS1P0CW21 52 aa7.56□□□□□ -1.2
SOX6-213ENST00000530378 SMIM17P0DL12 118 aa7.56□□□□□ -1.2
SOX6-213ENST00000530378 RPS10P46783 165 aaKnown RBP7.56□□□□□ -1.2
SOX6-213ENST00000530378 SLAQ13239 276 aa7.56□□□□□ -1.2
SOX6-213ENST00000530378 LGALS9BQ3B8N2 356 aa7.56□□□□□ -1.2
SOX6-213ENST00000530378 TMEM136Q6ZRR5 245 aa7.56□□□□□ -1.2
SOX6-213ENST00000530378 LOC105371267A0A1B0GV96 52 aa7.55□□□□□ -1.2
SOX6-213ENST00000530378 S100A6P06703 90 aa7.55□□□□□ -1.2
SOX6-213ENST00000530378 C12orf74Q32Q52 190 aa7.55□□□□□ -1.2
SOX6-213ENST00000530378 KIAA1644Q3SXP7 199 aa7.55□□□□□ -1.2
SOX6-213ENST00000530378 SMIM15Q7Z3B0 74 aa7.55□□□□□ -1.2
SOX6-213ENST00000530378 A8MWV9 139 aa7.55□□□□□ -1.2
SOX6-213ENST00000530378 RS1O15537 224 aa7.55□□□□□ -1.2
SOX6-213ENST00000530378 GAS8-AS1O95177 125 aa7.55□□□□□ -1.2
SOX6-213ENST00000530378 CRYGDP07320 174 aa7.55□□□□□ -1.2
SOX6-213ENST00000530378 RAB5AP20339 215 aa7.55□□□□□ -1.2
SOX6-213ENST00000530378 WDR73Q6P4I2 378 aa7.55□□□□□ -1.2
SOX6-213ENST00000530378 Q6ZSN1 163 aa7.55□□□□□ -1.2
SOX6-213ENST00000530378 Q6ZTC4 211 aa7.55□□□□□ -1.2
SOX6-213ENST00000530378 LINC00612Q8N6U2 182 aa7.55□□□□□ -1.2
SOX6-213ENST00000530378 C11orf45Q8TAV5 145 aa7.55□□□□□ -1.2
SOX6-213ENST00000530378 TMEM191AQ9H0A3 160 aa7.55□□□□□ -1.2
SOX6-213ENST00000530378 DPH3P1Q9H4G8 78 aa7.55□□□□□ -1.2
SOX6-213ENST00000530378 U3KQK5 164 aa7.55□□□□□ -1.2
SOX6-213ENST00000530378 TRAV4A0A0B4J268 109 aa7.54□□□□□ -1.2
SOX6-213ENST00000530378 A0A1B0GW15 77 aa7.54□□□□□ -1.2
SOX6-213ENST00000530378 S100A8P05109 93 aa7.54□□□□□ -1.2
SOX6-213ENST00000530378 P0DMU3 169 aa7.54□□□□□ -1.2
SOX6-213ENST00000530378 FAM231AP0DMU4 169 aa7.54□□□□□ -1.2
SOX6-213ENST00000530378 FAM231CP0DMU5 169 aa7.54□□□□□ -1.2
SOX6-213ENST00000530378 GATA1P15976 413 aaPredicted RBP7.54□□□□□ -1.2
SOX6-213ENST00000530378 HOXA5P20719 270 aa7.54□□□□□ -1.2
SOX6-213ENST00000530378 RNF185Q96GF1 192 aa7.54□□□□□ -1.2
SOX6-213ENST00000530378 MRPL18Q9H0U6 180 aaKnown RBP7.54□□□□□ -1.2
SOX6-213ENST00000530378 TRAPPC1Q9Y5R8 145 aa7.54□□□□□ -1.2
SOX6-213ENST00000530378 KIF25-AS1Q9Y6Z4 181 aa7.54□□□□□ -1.2
SOX6-213ENST00000530378 NHLRC4P0CG21 123 aaPredicted RBP7.53□□□□□ -1.2
SOX6-213ENST00000530378 LINC00315P59091 139 aa7.53□□□□□ -1.2
SOX6-213ENST00000530378 FABP9Q0Z7S8 132 aa7.53□□□□□ -1.2
SOX6-213ENST00000530378 MRPL51Q4U2R6 128 aaKnown RBP7.53□□□□□ -1.2
SOX6-213ENST00000530378 FAM104BQ5XKR9 115 aa7.53□□□□□ -1.2
SOX6-213ENST00000530378 SUMO4Q6EEV6 95 aa7.53□□□□□ -1.2
SOX6-213ENST00000530378 PTH2Q96A98 100 aa7.53□□□□□ -1.2
SOX6-213ENST00000530378 DNAH7Q8WXX0 4024 aa7.53□□□□□ -1.2
SOX6-213ENST00000530378 TRGV4A0A0C4DH28 118 aa7.52□□□□□ -1.2
SOX6-213ENST00000530378 APCSP02743 223 aa7.52□□□□□ -1.2
SOX6-213ENST00000530378 RAB4AP20338 218 aa7.52□□□□□ -1.2
SOX6-213ENST00000530378 UFSP1Q6NVU6 142 aa7.52□□□□□ -1.2
SOX6-213ENST00000530378 GNB1LQ9BYB4 327 aa7.52□□□□□ -1.2
SOX6-213ENST00000530378 Q9UF83 564 aa7.52□□□□□ -1.2
SOX6-213ENST00000530378 A0A0J9YY99 117 aa7.52□□□□□ -1.21
SOX6-213ENST00000530378 D6R8Y8 96 aa7.52□□□□□ -1.21
SOX6-213ENST00000530378 F5H768 121 aa7.52□□□□□ -1.21
SOX6-213ENST00000530378 HLA-DQA1P01909 254 aa7.52□□□□□ -1.21
SOX6-213ENST00000530378 TRGC2P03986 189 aa7.52□□□□□ -1.21
SOX6-213ENST00000530378 ANKRD39Q53RE8 183 aa7.52□□□□□ -1.21
SOX6-213ENST00000530378 RASL11AQ6T310 242 aa7.52□□□□□ -1.21
SOX6-213ENST00000530378 RPL39LQ96EH5 51 aaKnown RBP7.52□□□□□ -1.21
SOX6-213ENST00000530378 LOC100131303A0A0U1RQF7 123 aa7.51□□□□□ -1.21
SOX6-213ENST00000530378 TEX48A0A1B0GUV7 120 aa7.51□□□□□ -1.21
SOX6-213ENST00000530378 ATP5G1P05496 136 aa7.51□□□□□ -1.21
SOX6-213ENST00000530378 FHL2Q14192 279 aa7.51□□□□□ -1.21
SOX6-213ENST00000530378 PIK3CD-AS1Q5SR53 167 aa7.51□□□□□ -1.21
SOX6-213ENST00000530378 GATD1Q8NB37 220 aa7.51□□□□□ -1.21
SOX6-213ENST00000530378 DEFB104AQ8WTQ1 72 aa7.51□□□□□ -1.21
SOX6-213ENST00000530378 CSMD3Q7Z407 3707 aa7.5□□□□□ -1.21
SOX6-213ENST00000530378 RHODO00212 210 aa7.5□□□□□ -1.21
SOX6-213ENST00000530378 CKS2P33552 79 aa7.5□□□□□ -1.21
SOX6-213ENST00000530378 LCE2CQ5TA81 110 aa7.5□□□□□ -1.21
SOX6-213ENST00000530378 EDA2RQ9HAV5 297 aa7.5□□□□□ -1.21
SOX6-213ENST00000530378 PRSS47A8MTI9 375 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms