RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 C14orf178Q8N769 122 aaPredicted RBP9.72□□□□□ -0.85
CAPN1-216ENST00000528739 SFRP2Q96HF1 295 aa9.72□□□□□ -0.85
CAPN1-216ENST00000528739 MLST8Q9BVC4 326 aa9.72□□□□□ -0.85
CAPN1-216ENST00000528739 TPPP3Q9BW30 176 aa9.72□□□□□ -0.85
CAPN1-216ENST00000528739 MSRB1Q9NZV6 116 aa9.72□□□□□ -0.85
CAPN1-216ENST00000528739 RAB19A4D1S5 217 aa9.71□□□□□ -0.86
CAPN1-216ENST00000528739 PDE6DO43924 150 aa9.71□□□□□ -0.86
CAPN1-216ENST00000528739 DNAH10OSP0CZ25 163 aa9.71□□□□□ -0.86
CAPN1-216ENST00000528739 GNG4P50150 75 aa9.71□□□□□ -0.86
CAPN1-216ENST00000528739 TIRAPP58753 221 aa9.71□□□□□ -0.86
CAPN1-216ENST00000528739 MEF2BQ02080 365 aaPredicted RBP9.71□□□□□ -0.86
CAPN1-216ENST00000528739 LELP1Q5T871 98 aa9.71□□□□□ -0.86
CAPN1-216ENST00000528739 C9orf62Q8N4C0 152 aa9.71□□□□□ -0.86
CAPN1-216ENST00000528739 SCRT2Q9NQ03 307 aa9.71□□□□□ -0.86
CAPN1-216ENST00000528739 K7EP13 123 aa9.7□□□□□ -0.86
CAPN1-216ENST00000528739 PSCAO43653 123 aa9.7□□□□□ -0.86
CAPN1-216ENST00000528739 BCL2P10415 239 aa9.7□□□□□ -0.86
CAPN1-216ENST00000528739 ERVFC1-1P60608 527 aa9.7□□□□□ -0.86
CAPN1-216ENST00000528739 ZNF56Q15929 161 aa9.7□□□□□ -0.86
CAPN1-216ENST00000528739 ALKAL2Q6UX46 152 aa9.7□□□□□ -0.86
CAPN1-216ENST00000528739 C11orf52Q96A22 123 aa9.7□□□□□ -0.86
CAPN1-216ENST00000528739 VAX2Q9UIW0 290 aa9.7□□□□□ -0.86
CAPN1-216ENST00000528739 BOLA1Q9Y3E2 137 aa9.7□□□□□ -0.86
CAPN1-216ENST00000528739 F5H697 171 aa9.69□□□□□ -0.86
CAPN1-216ENST00000528739 OR10AG1Q8NH19 301 aa9.69□□□□□ -0.86
CAPN1-216ENST00000528739 Q9HAA7 133 aa9.69□□□□□ -0.86
CAPN1-216ENST00000528739 SMIM17P0DL12 118 aa9.68□□□□□ -0.86
CAPN1-216ENST00000528739 BLOC1S1P78537 153 aa9.68□□□□□ -0.86
CAPN1-216ENST00000528739 RPL36AP83881 106 aaKnown RBP9.68□□□□□ -0.86
CAPN1-216ENST00000528739 UFSP1Q6NVU6 142 aa9.68□□□□□ -0.86
CAPN1-216ENST00000528739 OR2D3Q8NGH3 330 aa9.68□□□□□ -0.86
CAPN1-216ENST00000528739 RPL36ALQ969Q0 106 aaKnown RBP9.68□□□□□ -0.86
CAPN1-216ENST00000528739 Q9UF83 564 aa9.68□□□□□ -0.86
CAPN1-216ENST00000528739 P01737 135 aa9.67□□□□□ -0.86
CAPN1-216ENST00000528739 CXCL1P09341 107 aa9.67□□□□□ -0.86
CAPN1-216ENST00000528739 GZMBP10144 247 aa9.67□□□□□ -0.86
CAPN1-216ENST00000528739 TAGLN2P37802 199 aaKnown RBP9.67□□□□□ -0.86
CAPN1-216ENST00000528739 NKX2-5P52952 324 aaPredicted RBP9.67□□□□□ -0.86
CAPN1-216ENST00000528739 RPS20P60866 119 aaKnown RBP9.67□□□□□ -0.86
CAPN1-216ENST00000528739 LINC01556Q5JQF7 62 aa9.67□□□□□ -0.86
CAPN1-216ENST00000528739 Q6ZRN7 208 aaPredicted RBP9.67□□□□□ -0.86
CAPN1-216ENST00000528739 BIN3Q9NQY0 253 aa9.67□□□□□ -0.86
CAPN1-216ENST00000528739 A0A087WWC5 75 aa9.66□□□□□ -0.86
CAPN1-216ENST00000528739 XKRY2A2RUG3 117 aa9.66□□□□□ -0.86
CAPN1-216ENST00000528739 CEBPGP53567 150 aa9.66□□□□□ -0.86
CAPN1-216ENST00000528739 KRTAP10-2P60368 255 aa9.66□□□□□ -0.86
CAPN1-216ENST00000528739 URGCP-MRPS24S4R325 110 aa9.66□□□□□ -0.86
CAPN1-216ENST00000528739 A0A1B0GVG6 124 aa9.65□□□□□ -0.86
CAPN1-216ENST00000528739 RBFOX3A6NFN3 312 aa9.65□□□□□ -0.86
CAPN1-216ENST00000528739 SNAI2O43623 268 aa9.65□□□□□ -0.86
CAPN1-216ENST00000528739 OR5AL1P0C617 328 aa9.65□□□□□ -0.86
CAPN1-216ENST00000528739 FUSP35637 526 aaKnown RBP eCLIP9.65□□□□□ -0.86
CAPN1-216ENST00000528739 RAB4BP61018 213 aa9.65□□□□□ -0.86
CAPN1-216ENST00000528739 KCNIP4Q6PIL6 250 aa9.65□□□□□ -0.86
CAPN1-216ENST00000528739 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.65□□□□□ -0.86
CAPN1-216ENST00000528739 FER1L6-AS1Q8NA97 138 aa9.65□□□□□ -0.86
CAPN1-216ENST00000528739 IBA57-AS1B1ANH7 110 aa9.64□□□□□ -0.87
CAPN1-216ENST00000528739 IGLV2-8P01709 118 aa9.64□□□□□ -0.87
CAPN1-216ENST00000528739 MGPP08493 103 aa9.64□□□□□ -0.87
CAPN1-216ENST00000528739 SMIM12Q96EX1 92 aa9.64□□□□□ -0.87
CAPN1-216ENST00000528739 AP1S3Q96PC3 154 aa9.64□□□□□ -0.87
CAPN1-216ENST00000528739 SSBP4Q9BWG4 385 aaPredicted RBP9.64□□□□□ -0.87
CAPN1-216ENST00000528739 PKD1P98161 4303 aa9.63□□□□□ -0.87
CAPN1-216ENST00000528739 TRBV7-3A0A075B6L6 115 aa9.63□□□□□ -0.87
CAPN1-216ENST00000528739 A0A087WTM6 91 aa9.63□□□□□ -0.87
CAPN1-216ENST00000528739 TRBV10-1A0A0K0K1A3 114 aa9.63□□□□□ -0.87
CAPN1-216ENST00000528739 TMEM262E9PQX1 116 aa9.63□□□□□ -0.87
CAPN1-216ENST00000528739 PGPEP1Q9NXJ5 209 aa9.63□□□□□ -0.87
CAPN1-216ENST00000528739 DYNC1H1Q14204 4646 aaKnown RBP9.63□□□□□ -0.87
CAPN1-216ENST00000528739 C19orf71A6NCJ1 209 aa9.62□□□□□ -0.87
CAPN1-216ENST00000528739 LINC00694P0DN24 101 aa9.62□□□□□ -0.87
CAPN1-216ENST00000528739 CACNG7P62955 275 aa9.62□□□□□ -0.87
CAPN1-216ENST00000528739 Q8N3U1 123 aa9.62□□□□□ -0.87
CAPN1-216ENST00000528739 EIF5A2Q9GZV4 153 aaKnown RBP9.62□□□□□ -0.87
CAPN1-216ENST00000528739 PKHD1P08F94 4074 aa9.61□□□□□ -0.87
CAPN1-216ENST00000528739 DNAH11Q96DT5 4516 aa9.61□□□□□ -0.87
CAPN1-216ENST00000528739 TRBV20OR9-2A0A075B6H5 130 aa9.61□□□□□ -0.87
CAPN1-216ENST00000528739 A0A087WX48 190 aa9.61□□□□□ -0.87
CAPN1-216ENST00000528739 TOR2AQ5JU69 321 aa9.61□□□□□ -0.87
CAPN1-216ENST00000528739 DAZ4Q86SG3 579 aaKnown RBP9.61□□□□□ -0.87
CAPN1-216ENST00000528739 NUDT10Q8NFP7 164 aa9.61□□□□□ -0.87
CAPN1-216ENST00000528739 NUDT11Q96G61 164 aa9.61□□□□□ -0.87
CAPN1-216ENST00000528739 DAZ3Q9NR90 486 aaKnown RBP9.61□□□□□ -0.87
CAPN1-216ENST00000528739 HERC2O95714 4834 aa9.6□□□□□ -0.87
CAPN1-216ENST00000528739 KIAA1109Q2LD37 5005 aa9.6□□□□□ -0.87
CAPN1-216ENST00000528739 F2Z2F3 143 aa9.6□□□□□ -0.87
CAPN1-216ENST00000528739 UBE2D3P61077 147 aa9.6□□□□□ -0.87
CAPN1-216ENST00000528739 UBE2D2P62837 147 aa9.6□□□□□ -0.87
CAPN1-216ENST00000528739 LYZL1Q6UWQ5 148 aa9.6□□□□□ -0.87
CAPN1-216ENST00000528739 NEXN-AS1Q8NBZ9 246 aa9.6□□□□□ -0.87
CAPN1-216ENST00000528739 OCC1Q8TAD7 63 aa9.6□□□□□ -0.87
CAPN1-216ENST00000528739 TM2D2Q9BX73 214 aa9.6□□□□□ -0.87
CAPN1-216ENST00000528739 RNASE7Q9H1E1 156 aaKnown RBP9.6□□□□□ -0.87
CAPN1-216ENST00000528739 TRAV8-3A0A0A6YYJ7 113 aa9.59□□□□□ -0.87
CAPN1-216ENST00000528739 IGLC6P0CF74 106 aa9.59□□□□□ -0.87
CAPN1-216ENST00000528739 TRGC1P0CF51 173 aa9.58□□□□□ -0.88
CAPN1-216ENST00000528739 LAGE3Q14657 143 aa9.58□□□□□ -0.88
CAPN1-216ENST00000528739 TWIST1Q15672 202 aa9.58□□□□□ -0.88
CAPN1-216ENST00000528739 NIT1Q86X76 327 aa9.58□□□□□ -0.88
CAPN1-216ENST00000528739 OR10G8Q8NGN5 311 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms