RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 C2orf48Q96LS8 159 aa5.83□□□□□ -1.48
SOX6-211ENST00000528429 RPP21Q9H633 154 aaKnown RBP5.83□□□□□ -1.48
SOX6-211ENST00000528429 RNF114Q9Y508 228 aa5.83□□□□□ -1.48
SOX6-211ENST00000528429 HIGD1CA8MV81 97 aa5.83□□□□□ -1.48
SOX6-211ENST00000528429 Q0VG73 95 aa5.83□□□□□ -1.48
SOX6-211ENST00000528429 OR5A1Q8NGJ0 315 aa5.83□□□□□ -1.48
SOX6-211ENST00000528429 ZNRF2Q8NHG8 242 aa5.83□□□□□ -1.48
SOX6-211ENST00000528429 SPANXB1Q9NS25 103 aaPredicted RBP5.83□□□□□ -1.48
SOX6-211ENST00000528429 FN1P02751 2386 aaKnown RBP5.83□□□□□ -1.48
SOX6-211ENST00000528429 SETXQ7Z333 2677 aaKnown RBP5.82□□□□□ -1.48
SOX6-211ENST00000528429 TMSB15BA0A087X1C1 80 aa5.82□□□□□ -1.48
SOX6-211ENST00000528429 SMIM27A0A1W2PRY6 76 aa5.82□□□□□ -1.48
SOX6-211ENST00000528429 GPX1P07203 203 aa5.82□□□□□ -1.48
SOX6-211ENST00000528429 RNASE1P07998 156 aaKnown RBP5.82□□□□□ -1.48
SOX6-211ENST00000528429 C20orf173Q96LM9 149 aa5.82□□□□□ -1.48
SOX6-211ENST00000528429 PRR25Q96S07 402 aa5.82□□□□□ -1.48
SOX6-211ENST00000528429 JMJD1CQ15652 2540 aa5.82□□□□□ -1.48
SOX6-211ENST00000528429 NSD1Q96L73 2696 aaPredicted RBP5.82□□□□□ -1.48
SOX6-211ENST00000528429 C19orf71A6NCJ1 209 aa5.82□□□□□ -1.48
SOX6-211ENST00000528429 A8MWL6 223 aa5.82□□□□□ -1.48
SOX6-211ENST00000528429 K7EMT4 169 aa5.82□□□□□ -1.48
SOX6-211ENST00000528429 INSL3P51460 131 aa5.82□□□□□ -1.48
SOX6-211ENST00000528429 HILS1P60008 231 aa5.82□□□□□ -1.48
SOX6-211ENST00000528429 NUP35Q8NFH5 326 aa5.82□□□□□ -1.48
SOX6-211ENST00000528429 LINC01006Q8NI28 216 aa5.82□□□□□ -1.48
SOX6-211ENST00000528429 TSKUQ8WUA8 353 aa5.82□□□□□ -1.48
SOX6-211ENST00000528429 MRPL18Q9H0U6 180 aaKnown RBP5.82□□□□□ -1.48
SOX6-211ENST00000528429 ZNF492Q9P255 531 aa5.82□□□□□ -1.48
SOX6-211ENST00000528429 TRBV6-1A0A0K0K1D8 114 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 SNURFLB1AK76 121 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 H3BUT2 72 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 CD28P10747 220 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 CRIP1P50238 77 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 PGLYRP4Q96LB8 373 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 AGPAT4-IT1Q9H0P7 198 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 TP73-AS1Q9UF72 201 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 SORL1Q92673 2214 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 ANK3Q12955 4377 aaKnown RBP5.81□□□□□ -1.48
SOX6-211ENST00000528429 F6UB75 175 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 LINC01619G3V211 115 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 C4orf3Q8WVX3 66 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 SPCS1Q9Y6A9 102 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 TRAV9-1A0A075B6T8 112 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 IZUMO1RA6ND01 250 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 C2orf70A6NJV1 201 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 NPIPB6E9PJ23 425 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 F2Z2F3 143 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 SH2D1AO60880 128 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 ZNF688P0C7X2 276 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 ZNF80P51504 273 aaPredicted RBP5.81□□□□□ -1.48
SOX6-211ENST00000528429 PMCHL1Q16048 86 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 GTSF1Q8WW33 167 aa5.81□□□□□ -1.48
SOX6-211ENST00000528429 F8P00451 2351 aa5.8□□□□□ -1.48
SOX6-211ENST00000528429 SOCS3O14543 225 aa5.8□□□□□ -1.48
SOX6-211ENST00000528429 C3orf79P0CE67 100 aa5.8□□□□□ -1.48
SOX6-211ENST00000528429 ZNF138P52744 262 aa5.8□□□□□ -1.48
SOX6-211ENST00000528429 SH2D6Q7Z4S9 175 aa5.8□□□□□ -1.48
SOX6-211ENST00000528429 ATOH7Q8N100 152 aa5.8□□□□□ -1.48
SOX6-211ENST00000528429 OR10J6PQ8NGY7 276 aa5.8□□□□□ -1.48
SOX6-211ENST00000528429 OR10AG1Q8NH19 301 aa5.8□□□□□ -1.48
SOX6-211ENST00000528429 KCNS1Q96KK3 526 aa5.8□□□□□ -1.48
SOX6-211ENST00000528429 LINC01587Q99440 93 aa5.8□□□□□ -1.48
SOX6-211ENST00000528429 NIPBLQ6KC79 2804 aaeCLIP5.8□□□□□ -1.48
SOX6-211ENST00000528429 C2CD3Q4AC94 2353 aa5.8□□□□□ -1.48
SOX6-211ENST00000528429 FAM236AA0A1B0GUQ0 79 aa5.8□□□□□ -1.48
SOX6-211ENST00000528429 FAM236BA0A1B0GV22 79 aa5.8□□□□□ -1.48
SOX6-211ENST00000528429 A0A1B0GX51 115 aa5.8□□□□□ -1.48
SOX6-211ENST00000528429 C9orf118A6NHY6 69 aa5.8□□□□□ -1.48
SOX6-211ENST00000528429 H3BS24 57 aa5.8□□□□□ -1.48
SOX6-211ENST00000528429 KLF5Q13887 457 aaPredicted RBP5.8□□□□□ -1.48
SOX6-211ENST00000528429 DLX4Q92988 240 aaPredicted RBP5.8□□□□□ -1.48
SOX6-211ENST00000528429 KIR2DL4Q99706 377 aa5.8□□□□□ -1.48
SOX6-211ENST00000528429 TRAV9-2A0A087WT02 112 aa5.79□□□□□ -1.48
SOX6-211ENST00000528429 RBAKDNA6NC62 111 aa5.79□□□□□ -1.48
SOX6-211ENST00000528429 LGALS9O00182 355 aa5.79□□□□□ -1.48
SOX6-211ENST00000528429 WFDC2Q14508 124 aa5.79□□□□□ -1.48
SOX6-211ENST00000528429 ETDBQ3ZM63 59 aa5.79□□□□□ -1.48
SOX6-211ENST00000528429 TTC32Q5I0X7 151 aa5.79□□□□□ -1.48
SOX6-211ENST00000528429 DCANP1Q8TF63 244 aa5.79□□□□□ -1.48
SOX6-211ENST00000528429 ST20Q9HBF5 79 aa5.79□□□□□ -1.48
SOX6-211ENST00000528429 IFITM1P13164 125 aa5.79□□□□□ -1.48
SOX6-211ENST00000528429 PSMG4Q5JS54 123 aa5.79□□□□□ -1.48
SOX6-211ENST00000528429 APRG1Q8IVJ8 170 aa5.79□□□□□ -1.48
SOX6-211ENST00000528429 BORCS7Q96B45 105 aa5.79□□□□□ -1.48
SOX6-211ENST00000528429 SPRY2O43597 315 aa5.78□□□□□ -1.48
SOX6-211ENST00000528429 ZNF324O75467 553 aaPredicted RBP5.78□□□□□ -1.48
SOX6-211ENST00000528429 IGKV3-20P01619 116 aa5.78□□□□□ -1.48
SOX6-211ENST00000528429 RPS28P62857 69 aaKnown RBP5.78□□□□□ -1.48
SOX6-211ENST00000528429 Q5XG85 94 aa5.78□□□□□ -1.48
SOX6-211ENST00000528429 TMEM136Q6ZRR5 245 aa5.78□□□□□ -1.48
SOX6-211ENST00000528429 C9orf47Q6ZRZ4 202 aa5.78□□□□□ -1.48
SOX6-211ENST00000528429 OR8A1Q8NGG7 326 aa5.78□□□□□ -1.48
SOX6-211ENST00000528429 CCL24O00175 119 aa5.78□□□□□ -1.48
SOX6-211ENST00000528429 OVOL1O14753 267 aa5.78□□□□□ -1.48
SOX6-211ENST00000528429 Q6ZQT7 251 aa5.78□□□□□ -1.48
SOX6-211ENST00000528429 DYNLRB2Q8TF09 96 aa5.78□□□□□ -1.48
SOX6-211ENST00000528429 RASL10AQ92737 203 aa5.78□□□□□ -1.48
SOX6-211ENST00000528429 GNB1LQ9BYB4 327 aa5.78□□□□□ -1.48
SOX6-211ENST00000528429 C16orf95Q9H693 158 aa5.78□□□□□ -1.48
SOX6-211ENST00000528429 BAHCC1Q9P281 2608 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms