RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 AKAP14Q86UN6 197 aa22.31■■□□□ 1.16
SSSCA1-205ENST00000527920 C14orf178Q8N769 122 aaPredicted RBP22.31■■□□□ 1.16
SSSCA1-205ENST00000527920 GAGE12JA6NER3 117 aa22.3■■□□□ 1.16
SSSCA1-205ENST00000527920 EREGO14944 169 aa22.3■■□□□ 1.16
SSSCA1-205ENST00000527920 GAGE1Q13065 139 aa22.3■■□□□ 1.16
SSSCA1-205ENST00000527920 GAGE4Q13068 117 aa22.3■■□□□ 1.16
SSSCA1-205ENST00000527920 GAGE5Q13069 117 aa22.3■■□□□ 1.16
SSSCA1-205ENST00000527920 GAGE13Q4V321 117 aa22.3■■□□□ 1.16
SSSCA1-205ENST00000527920 FAM74A4Q5TZK3 123 aa22.29■■□□□ 1.16
SSSCA1-205ENST00000527920 DERL1Q9BUN8 251 aa22.29■■□□□ 1.16
SSSCA1-205ENST00000527920 IFNA1P01562 189 aa22.28■■□□□ 1.16
SSSCA1-205ENST00000527920 RPL19P84098 196 aaKnown RBP22.28■■□□□ 1.16
SSSCA1-205ENST00000527920 MEF2BQ02080 365 aaPredicted RBP22.28■■□□□ 1.16
SSSCA1-205ENST00000527920 SSBP4Q9BWG4 385 aaPredicted RBP22.28■■□□□ 1.16
SSSCA1-205ENST00000527920 A0A087WWL8 130 aa22.27■■□□□ 1.16
SSSCA1-205ENST00000527920 IBA57-AS1B1ANH7 110 aa22.27■■□□□ 1.16
SSSCA1-205ENST00000527920 SNAI2O43623 268 aa22.27■■□□□ 1.16
SSSCA1-205ENST00000527920 PDE6DO43924 150 aa22.27■■□□□ 1.16
SSSCA1-205ENST00000527920 OR5AL1P0C617 328 aa22.27■■□□□ 1.16
SSSCA1-205ENST00000527920 PRR27Q6MZM9 219 aa22.27■■□□□ 1.16
SSSCA1-205ENST00000527920 SMIM12Q96EX1 92 aa22.27■■□□□ 1.16
SSSCA1-205ENST00000527920 Q9UF83 564 aa22.27■■□□□ 1.16
SSSCA1-205ENST00000527920 A0A087WWC5 75 aa22.26■■□□□ 1.15
SSSCA1-205ENST00000527920 TRBV10-1A0A0K0K1A3 114 aa22.25■■□□□ 1.15
SSSCA1-205ENST00000527920 CENPWQ5EE01 88 aa22.25■■□□□ 1.15
SSSCA1-205ENST00000527920 C9orf62Q8N4C0 152 aa22.25■■□□□ 1.15
SSSCA1-205ENST00000527920 PGPEP1Q9NXJ5 209 aa22.25■■□□□ 1.15
SSSCA1-205ENST00000527920 BCL2P10415 239 aa22.24■■□□□ 1.15
SSSCA1-205ENST00000527920 CDPF1Q6NVV7 123 aa22.24■■□□□ 1.15
SSSCA1-205ENST00000527920 OR10AG1Q8NH19 301 aa22.24■■□□□ 1.15
SSSCA1-205ENST00000527920 A0A087WTM6 91 aa22.23■■□□□ 1.15
SSSCA1-205ENST00000527920 TAGLN2P37802 199 aaKnown RBP22.23■■□□□ 1.15
SSSCA1-205ENST00000527920 LAGE3Q14657 143 aa22.22■■□□□ 1.15
SSSCA1-205ENST00000527920 IGLV2-8P01709 118 aa22.21■■□□□ 1.15
SSSCA1-205ENST00000527920 VAX2Q9UIW0 290 aa22.21■■□□□ 1.15
SSSCA1-205ENST00000527920 GNG4P50150 75 aa22.2■■□□□ 1.14
SSSCA1-205ENST00000527920 hCG_2014768A0A024R1R8 64 aa22.19■■□□□ 1.14
SSSCA1-205ENST00000527920 IGHV3-30P01768 117 aa22.18■■□□□ 1.14
SSSCA1-205ENST00000527920 IGHV3-33P01772 117 aa22.18■■□□□ 1.14
SSSCA1-205ENST00000527920 IGHV3-30-3P0DP02 117 aa22.18■■□□□ 1.14
SSSCA1-205ENST00000527920 IGHV3-30-5P0DP03 117 aa22.18■■□□□ 1.14
SSSCA1-205ENST00000527920 RAB4BP61018 213 aa22.18■■□□□ 1.14
SSSCA1-205ENST00000527920 SPANXN1Q5VSR9 72 aa22.18■■□□□ 1.14
SSSCA1-205ENST00000527920 DNAH5Q8TE73 4624 aa22.18■■□□□ 1.14
SSSCA1-205ENST00000527920 HSPG2P98160 4391 aa22.18■■□□□ 1.14
SSSCA1-205ENST00000527920 C19orf71A6NCJ1 209 aa22.17■■□□□ 1.14
SSSCA1-205ENST00000527920 RPL36AP83881 106 aaKnown RBP22.17■■□□□ 1.14
SSSCA1-205ENST00000527920 RPL36ALQ969Q0 106 aaKnown RBP22.17■■□□□ 1.14
SSSCA1-205ENST00000527920 RPS20P60866 119 aaKnown RBP22.16■■□□□ 1.14
SSSCA1-205ENST00000527920 OR10G8Q8NGN5 311 aa22.16■■□□□ 1.14
SSSCA1-205ENST00000527920 DAZAP1Q96EP5 407 aaKnown RBP22.16■■□□□ 1.14
SSSCA1-205ENST00000527920 BIN3Q9NQY0 253 aa22.16■■□□□ 1.14
SSSCA1-205ENST00000527920 MED9Q9NWA0 146 aa22.16■■□□□ 1.14
SSSCA1-205ENST00000527920 TRBV20OR9-2A0A075B6H5 130 aa22.15■■□□□ 1.14
SSSCA1-205ENST00000527920 TRBV7-3A0A075B6L6 115 aa22.15■■□□□ 1.14
SSSCA1-205ENST00000527920 RAB19A4D1S5 217 aa22.15■■□□□ 1.14
SSSCA1-205ENST00000527920 PCLOQ9Y6V0 5065 aa22.15■■□□□ 1.14
SSSCA1-205ENST00000527920 UBE2D3P61077 147 aa22.14■■□□□ 1.13
SSSCA1-205ENST00000527920 UBE2D2P62837 147 aa22.14■■□□□ 1.13
SSSCA1-205ENST00000527920 PSCAO43653 123 aa22.13■■□□□ 1.13
SSSCA1-205ENST00000527920 KRTAP17-1Q9BYP8 105 aa22.13■■□□□ 1.13
SSSCA1-205ENST00000527920 IGLC6P0CF74 106 aa22.12■■□□□ 1.13
SSSCA1-205ENST00000527920 ZNF56Q15929 161 aa22.12■■□□□ 1.13
SSSCA1-205ENST00000527920 OR2D3Q8NGH3 330 aa22.12■■□□□ 1.13
SSSCA1-205ENST00000527920 AP1S3Q96PC3 154 aa22.12■■□□□ 1.13
SSSCA1-205ENST00000527920 Q9HAA7 133 aa22.12■■□□□ 1.13
SSSCA1-205ENST00000527920 APOBP04114 4563 aaKnown RBP22.11■■□□□ 1.13
SSSCA1-205ENST00000527920 MUC21A0A0G2JKD1 596 aa22.1■■□□□ 1.13
SSSCA1-205ENST00000527920 MUC21A0A140T8X8 626 aa22.1■■□□□ 1.13
SSSCA1-205ENST00000527920 XKRY2A2RUG3 117 aa22.1■■□□□ 1.13
SSSCA1-205ENST00000527920 BLOC1S1P78537 153 aa22.1■■□□□ 1.13
SSSCA1-205ENST00000527920 TOR2AQ5JU69 321 aa22.1■■□□□ 1.13
SSSCA1-205ENST00000527920 FER1L6-AS1Q8NA97 138 aa22.1■■□□□ 1.13
SSSCA1-205ENST00000527920 LRCOL1A6NCL2 159 aa22.09■■□□□ 1.13
SSSCA1-205ENST00000527920 P01737 135 aa22.09■■□□□ 1.13
SSSCA1-205ENST00000527920 Q8N3U1 123 aa22.09■■□□□ 1.13
SSSCA1-205ENST00000527920 KIF25-AS1Q9Y6Z4 181 aa22.09■■□□□ 1.13
SSSCA1-205ENST00000527920 TRAV8-3A0A0A6YYJ7 113 aa22.08■■□□□ 1.13
SSSCA1-205ENST00000527920 ALKAL2Q6UX46 152 aa22.08■■□□□ 1.13
SSSCA1-205ENST00000527920 NIT1Q86X76 327 aa22.08■■□□□ 1.13
SSSCA1-205ENST00000527920 NEXN-AS1Q8NBZ9 246 aa22.08■■□□□ 1.13
SSSCA1-205ENST00000527920 CHCHD7Q9BUK0 85 aa22.08■■□□□ 1.13
SSSCA1-205ENST00000527920 TM2D2Q9BX73 214 aa22.08■■□□□ 1.13
SSSCA1-205ENST00000527920 LYPD6BQ8NI32 183 aa22.07■■□□□ 1.12
SSSCA1-205ENST00000527920 F2Z2F3 143 aa22.06■■□□□ 1.12
SSSCA1-205ENST00000527920 SMIM17P0DL12 118 aa22.06■■□□□ 1.12
SSSCA1-205ENST00000527920 GZMBP10144 247 aa22.06■■□□□ 1.12
SSSCA1-205ENST00000527920 CACNG7P62955 275 aa22.06■■□□□ 1.12
SSSCA1-205ENST00000527920 DAZ4Q86SG3 579 aaKnown RBP22.06■■□□□ 1.12
SSSCA1-205ENST00000527920 DAZ3Q9NR90 486 aaKnown RBP22.06■■□□□ 1.12
SSSCA1-205ENST00000527920 URGCP-MRPS24S4R325 110 aa22.06■■□□□ 1.12
SSSCA1-205ENST00000527920 MAPKAPK5-AS1Q8N8E1 139 aa22.04■■□□□ 1.12
SSSCA1-205ENST00000527920 NTN5Q8WTR8 489 aaPredicted RBP22.04■■□□□ 1.12
SSSCA1-205ENST00000527920 TPPP3Q9BW30 176 aa22.04■■□□□ 1.12
SSSCA1-205ENST00000527920 RBFOX3A6NFN3 312 aa22.03■■□□□ 1.12
SSSCA1-205ENST00000527920 F5H697 171 aa22.03■■□□□ 1.12
SSSCA1-205ENST00000527920 TMEM250H0YL14 139 aa22.03■■□□□ 1.12
SSSCA1-205ENST00000527920 FUSP35637 526 aaKnown RBP eCLIP22.02■■□□□ 1.12
SSSCA1-205ENST00000527920 SSTP61278 116 aa22.02■■□□□ 1.12
SSSCA1-205ENST00000527920 SREK1IP1Q8N9Q2 155 aaPredicted RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms