RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 S100A9P06702 114 aaKnown RBP12.99□□□□□ -0.33
CAPN1-211ENST00000527739 LINC01559Q495D7 138 aa12.99□□□□□ -0.33
CAPN1-211ENST00000527739 C14orf178Q8N769 122 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-211ENST00000527739 BOLA1Q9Y3E2 137 aa12.99□□□□□ -0.33
CAPN1-211ENST00000527739 HERC1Q15751 4861 aa12.98□□□□□ -0.33
CAPN1-211ENST00000527739 RHODO00212 210 aa12.98□□□□□ -0.33
CAPN1-211ENST00000527739 DNLZQ5SXM8 178 aa12.98□□□□□ -0.33
CAPN1-211ENST00000527739 BAGE2Q86Y30 109 aa12.98□□□□□ -0.33
CAPN1-211ENST00000527739 UFSP1Q6NVU6 142 aa12.97□□□□□ -0.33
CAPN1-211ENST00000527739 SCRT2Q9NQ03 307 aa12.97□□□□□ -0.33
CAPN1-211ENST00000527739 Q9UF83 564 aa12.97□□□□□ -0.33
CAPN1-211ENST00000527739 IBA57-AS1B1ANH7 110 aa12.96□□□□□ -0.33
CAPN1-211ENST00000527739 PRR27Q6MZM9 219 aa12.96□□□□□ -0.33
CAPN1-211ENST00000527739 CDPF1Q6NVV7 123 aa12.96□□□□□ -0.33
CAPN1-211ENST00000527739 ZFP82Q8N141 532 aa12.96□□□□□ -0.33
CAPN1-211ENST00000527739 SFRP2Q96HF1 295 aa12.96□□□□□ -0.33
CAPN1-211ENST00000527739 RPL19P84098 196 aaKnown RBP12.95□□□□□ -0.34
CAPN1-211ENST00000527739 GNG13Q9P2W3 67 aa12.95□□□□□ -0.34
CAPN1-211ENST00000527739 CCL20P78556 96 aa12.94□□□□□ -0.34
CAPN1-211ENST00000527739 SSTP61278 116 aa12.93□□□□□ -0.34
CAPN1-211ENST00000527739 A0A087WWC5 75 aa12.92□□□□□ -0.34
CAPN1-211ENST00000527739 MUC21A0A0G2JKD1 596 aa12.92□□□□□ -0.34
CAPN1-211ENST00000527739 MUC21A0A140T8X8 626 aa12.92□□□□□ -0.34
CAPN1-211ENST00000527739 EIF5AL1Q6IS14 154 aaKnown RBP12.92□□□□□ -0.34
CAPN1-211ENST00000527739 Q8N3U1 123 aa12.92□□□□□ -0.34
CAPN1-211ENST00000527739 TEX46H3BTG2 121 aa12.91□□□□□ -0.34
CAPN1-211ENST00000527739 LINC00694P0DN24 101 aa12.91□□□□□ -0.34
CAPN1-211ENST00000527739 RPL35P42766 123 aaKnown RBP12.91□□□□□ -0.34
CAPN1-211ENST00000527739 MLST8Q9BVC4 326 aa12.91□□□□□ -0.34
CAPN1-211ENST00000527739 MANBALQ9NQG1 85 aa12.91□□□□□ -0.34
CAPN1-211ENST00000527739 FAT1Q14517 4588 aa12.9□□□□□ -0.34
CAPN1-211ENST00000527739 RAB5CP51148 216 aa12.9□□□□□ -0.34
CAPN1-211ENST00000527739 SPANXN1Q5VSR9 72 aa12.9□□□□□ -0.34
CAPN1-211ENST00000527739 DAZ4Q86SG3 579 aaKnown RBP12.9□□□□□ -0.34
CAPN1-211ENST00000527739 OR10AG1Q8NH19 301 aa12.9□□□□□ -0.34
CAPN1-211ENST00000527739 DAZ3Q9NR90 486 aaKnown RBP12.9□□□□□ -0.34
CAPN1-211ENST00000527739 URGCP-MRPS24S4R325 110 aa12.9□□□□□ -0.34
CAPN1-211ENST00000527739 IGLV5-52A0A0A0MRZ9 124 aa12.89□□□□□ -0.35
CAPN1-211ENST00000527739 GCSHP23434 173 aa12.89□□□□□ -0.35
CAPN1-211ENST00000527739 KRTAP10-1P60331 282 aa12.89□□□□□ -0.35
CAPN1-211ENST00000527739 RPL36AP83881 106 aaKnown RBP12.89□□□□□ -0.35
CAPN1-211ENST00000527739 ZNF56Q15929 161 aa12.89□□□□□ -0.35
CAPN1-211ENST00000527739 RPL36ALQ969Q0 106 aaKnown RBP12.89□□□□□ -0.35
CAPN1-211ENST00000527739 DERL1Q9BUN8 251 aa12.89□□□□□ -0.35
CAPN1-211ENST00000527739 TM2D2Q9BX73 214 aa12.89□□□□□ -0.35
CAPN1-211ENST00000527739 LRCOL1A6NCL2 159 aa12.88□□□□□ -0.35
CAPN1-211ENST00000527739 TRAV8-3A0A0A6YYJ7 113 aa12.87□□□□□ -0.35
CAPN1-211ENST00000527739 TRAV1-1A0A0B4J248 108 aa12.87□□□□□ -0.35
CAPN1-211ENST00000527739 F5H697 171 aa12.87□□□□□ -0.35
CAPN1-211ENST00000527739 LAGE3Q14657 143 aa12.87□□□□□ -0.35
CAPN1-211ENST00000527739 TOR2AQ5JU69 321 aa12.87□□□□□ -0.35
CAPN1-211ENST00000527739 DAZAP1Q96EP5 407 aaKnown RBP12.87□□□□□ -0.35
CAPN1-211ENST00000527739 TRBV10-1A0A0K0K1A3 114 aa12.86□□□□□ -0.35
CAPN1-211ENST00000527739 SULT1A2P50226 295 aa12.86□□□□□ -0.35
CAPN1-211ENST00000527739 RAB4BP61018 213 aa12.86□□□□□ -0.35
CAPN1-211ENST00000527739 CENPWQ5EE01 88 aa12.86□□□□□ -0.35
CAPN1-211ENST00000527739 KCNIP4Q6PIL6 250 aa12.86□□□□□ -0.35
CAPN1-211ENST00000527739 TCTE3Q8IZS6 198 aa12.86□□□□□ -0.35
CAPN1-211ENST00000527739 TPPP3Q9BW30 176 aa12.86□□□□□ -0.35
CAPN1-211ENST00000527739 TRBV7-3A0A075B6L6 115 aa12.85□□□□□ -0.35
CAPN1-211ENST00000527739 IFNA1P01562 189 aa12.85□□□□□ -0.35
CAPN1-211ENST00000527739 CXCL1P09341 107 aa12.85□□□□□ -0.35
CAPN1-211ENST00000527739 Q8N814 137 aa12.85□□□□□ -0.35
CAPN1-211ENST00000527739 C11orf52Q96A22 123 aa12.85□□□□□ -0.35
CAPN1-211ENST00000527739 A0A087WX48 190 aa12.84□□□□□ -0.35
CAPN1-211ENST00000527739 RAB19A4D1S5 217 aa12.84□□□□□ -0.35
CAPN1-211ENST00000527739 SNAI2O43623 268 aa12.84□□□□□ -0.35
CAPN1-211ENST00000527739 OR5AL1P0C617 328 aa12.84□□□□□ -0.35
CAPN1-211ENST00000527739 SMIM17P0DL12 118 aa12.84□□□□□ -0.35
CAPN1-211ENST00000527739 XGP55808 180 aa12.84□□□□□ -0.35
CAPN1-211ENST00000527739 SLC51BQ86UW2 128 aa12.84□□□□□ -0.35
CAPN1-211ENST00000527739 NIT1Q86X76 327 aa12.84□□□□□ -0.35
CAPN1-211ENST00000527739 NTN5Q8WTR8 489 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-211ENST00000527739 MED9Q9NWA0 146 aa12.84□□□□□ -0.35
CAPN1-211ENST00000527739 EPM2AB3EWF7 344 aa12.83□□□□□ -0.36
CAPN1-211ENST00000527739 TMEM262E9PQX1 116 aa12.83□□□□□ -0.36
CAPN1-211ENST00000527739 LECT2O14960 151 aa12.83□□□□□ -0.36
CAPN1-211ENST00000527739 GZMBP10144 247 aa12.83□□□□□ -0.36
CAPN1-211ENST00000527739 GNG4P50150 75 aa12.83□□□□□ -0.36
CAPN1-211ENST00000527739 UBE2D3P61077 147 aa12.83□□□□□ -0.36
CAPN1-211ENST00000527739 UBE2D2P62837 147 aa12.83□□□□□ -0.36
CAPN1-211ENST00000527739 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-211ENST00000527739 OR2D3Q8NGH3 330 aa12.83□□□□□ -0.36
CAPN1-211ENST00000527739 SSBP4Q9BWG4 385 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-211ENST00000527739 KLK12Q9UKR0 248 aa12.83□□□□□ -0.36
CAPN1-211ENST00000527739 C1QBP02746 253 aa12.82□□□□□ -0.36
CAPN1-211ENST00000527739 MEF2BQ02080 365 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-211ENST00000527739 hCG_2014768A0A024R1R8 64 aa12.81□□□□□ -0.36
CAPN1-211ENST00000527739 RBFOX3A6NFN3 312 aa12.81□□□□□ -0.36
CAPN1-211ENST00000527739 PDE6DO43924 150 aa12.81□□□□□ -0.36
CAPN1-211ENST00000527739 NEXN-AS1Q8NBZ9 246 aa12.81□□□□□ -0.36
CAPN1-211ENST00000527739 UBE2WQ96B02 151 aa12.81□□□□□ -0.36
CAPN1-211ENST00000527739 RMI2Q96E14 147 aa12.81□□□□□ -0.36
CAPN1-211ENST00000527739 IGKV2D-24A0A075B6R9 120 aa12.8□□□□□ -0.36
CAPN1-211ENST00000527739 IGLV2-8P01709 118 aa12.8□□□□□ -0.36
CAPN1-211ENST00000527739 RPS20P60866 119 aaKnown RBP12.8□□□□□ -0.36
CAPN1-211ENST00000527739 HAMPP81172 84 aa12.8□□□□□ -0.36
CAPN1-211ENST00000527739 WFDC2Q14508 124 aa12.8□□□□□ -0.36
CAPN1-211ENST00000527739 ELOBQ15370 118 aa12.8□□□□□ -0.36
CAPN1-211ENST00000527739 FER1L6-AS1Q8NA97 138 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 179.1 ms