RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 NFE4Q86UQ8 179 aa11.93□□□□□ -0.5
NR1H3-228ENST00000525441 C10orf126Q8N4M7 172 aa11.93□□□□□ -0.5
NR1H3-228ENST00000525441 ATP6V0E2Q8NHE4 81 aa11.93□□□□□ -0.5
NR1H3-228ENST00000525441 SFRP2Q96HF1 295 aa11.93□□□□□ -0.5
NR1H3-228ENST00000525441 SAMD10Q9BYL1 202 aa11.93□□□□□ -0.5
NR1H3-228ENST00000525441 OR10J3Q5JRS4 329 aa11.92□□□□□ -0.5
NR1H3-228ENST00000525441 FAM74A4Q5TZK3 123 aa11.92□□□□□ -0.5
NR1H3-228ENST00000525441 UFSP1Q6NVU6 142 aa11.92□□□□□ -0.5
NR1H3-228ENST00000525441 Q6ZSN1 163 aa11.92□□□□□ -0.5
NR1H3-228ENST00000525441 ZNF575Q86XF7 245 aa11.92□□□□□ -0.5
NR1H3-228ENST00000525441 DERL1Q9BUN8 251 aa11.92□□□□□ -0.5
NR1H3-228ENST00000525441 GTSF1LQ9H1H1 148 aa11.92□□□□□ -0.5
NR1H3-228ENST00000525441 PKHD1P08F94 4074 aa11.91□□□□□ -0.5
NR1H3-228ENST00000525441 IGHV3-38A0A0C4DH36 116 aa11.91□□□□□ -0.5
NR1H3-228ENST00000525441 SRP19P09132 144 aaKnown RBP11.91□□□□□ -0.5
NR1H3-228ENST00000525441 RPL19P84098 196 aaKnown RBP11.91□□□□□ -0.5
NR1H3-228ENST00000525441 SRSF3P84103 164 aaKnown RBP11.91□□□□□ -0.5
NR1H3-228ENST00000525441 CENPWQ5EE01 88 aa11.91□□□□□ -0.5
NR1H3-228ENST00000525441 LELP1Q5T871 98 aa11.91□□□□□ -0.5
NR1H3-228ENST00000525441 SMIM12Q96EX1 92 aa11.91□□□□□ -0.5
NR1H3-228ENST00000525441 DNAH11Q96DT5 4516 aa11.91□□□□□ -0.5
NR1H3-228ENST00000525441 PKD1P98161 4303 aa11.9□□□□□ -0.5
NR1H3-228ENST00000525441 GAGE12JA6NER3 117 aa11.9□□□□□ -0.5
NR1H3-228ENST00000525441 CRYGDP07320 174 aa11.9□□□□□ -0.5
NR1H3-228ENST00000525441 GNG4P50150 75 aa11.9□□□□□ -0.5
NR1H3-228ENST00000525441 GAGE1Q13065 139 aa11.9□□□□□ -0.5
NR1H3-228ENST00000525441 GAGE4Q13068 117 aa11.9□□□□□ -0.5
NR1H3-228ENST00000525441 GAGE5Q13069 117 aa11.9□□□□□ -0.5
NR1H3-228ENST00000525441 GAGE13Q4V321 117 aa11.9□□□□□ -0.5
NR1H3-228ENST00000525441 UQCC3Q6UW78 93 aa11.9□□□□□ -0.5
NR1H3-228ENST00000525441 COMMD7Q86VX2 200 aa11.9□□□□□ -0.5
NR1H3-228ENST00000525441 DAZAP1Q96EP5 407 aaKnown RBP11.9□□□□□ -0.5
NR1H3-228ENST00000525441 MSRB1Q9NZV6 116 aa11.9□□□□□ -0.5
NR1H3-228ENST00000525441 A0A087WWL8 130 aa11.89□□□□□ -0.51
NR1H3-228ENST00000525441 C16orf90A8MZG2 172 aa11.89□□□□□ -0.51
NR1H3-228ENST00000525441 C9JQL5 133 aa11.89□□□□□ -0.51
NR1H3-228ENST00000525441 Q6ZRN7 208 aaPredicted RBP11.89□□□□□ -0.51
NR1H3-228ENST00000525441 C14orf178Q8N769 122 aaPredicted RBP11.89□□□□□ -0.51
NR1H3-228ENST00000525441 BIN3Q9NQY0 253 aa11.89□□□□□ -0.51
NR1H3-228ENST00000525441 SNAI2O43623 268 aa11.88□□□□□ -0.51
NR1H3-228ENST00000525441 OR5AL1P0C617 328 aa11.88□□□□□ -0.51
NR1H3-228ENST00000525441 LINC01556Q5JQF7 62 aa11.88□□□□□ -0.51
NR1H3-228ENST00000525441 DYNC1H1Q14204 4646 aaKnown RBP11.87□□□□□ -0.51
NR1H3-228ENST00000525441 EREGO14944 169 aa11.87□□□□□ -0.51
NR1H3-228ENST00000525441 LINC00694P0DN24 101 aa11.87□□□□□ -0.51
NR1H3-228ENST00000525441 RPS20P60866 119 aaKnown RBP11.87□□□□□ -0.51
NR1H3-228ENST00000525441 SPANXN1Q5VSR9 72 aa11.87□□□□□ -0.51
NR1H3-228ENST00000525441 SPATA12Q7Z6I5 190 aa11.87□□□□□ -0.51
NR1H3-228ENST00000525441 OR10AG1Q8NH19 301 aa11.87□□□□□ -0.51
NR1H3-228ENST00000525441 SSBP4Q9BWG4 385 aaPredicted RBP11.87□□□□□ -0.51
NR1H3-228ENST00000525441 A0A087WWC5 75 aa11.86□□□□□ -0.51
NR1H3-228ENST00000525441 TRBV10-1A0A0K0K1A3 114 aa11.86□□□□□ -0.51
NR1H3-228ENST00000525441 IGLV2-8P01709 118 aa11.86□□□□□ -0.51
NR1H3-228ENST00000525441 ERVFC1-1P60608 527 aa11.86□□□□□ -0.51
NR1H3-228ENST00000525441 TNFRSF18Q9Y5U5 241 aa11.86□□□□□ -0.51
NR1H3-228ENST00000525441 KIAA1109Q2LD37 5005 aa11.85□□□□□ -0.51
NR1H3-228ENST00000525441 XKRY2A2RUG3 117 aa11.85□□□□□ -0.51
NR1H3-228ENST00000525441 OR2D3Q8NGH3 330 aa11.85□□□□□ -0.51
NR1H3-228ENST00000525441 HERC2O95714 4834 aa11.85□□□□□ -0.51
NR1H3-228ENST00000525441 P01737 135 aa11.84□□□□□ -0.51
NR1H3-228ENST00000525441 RAB4BP61018 213 aa11.84□□□□□ -0.51
NR1H3-228ENST00000525441 RPL36AP83881 106 aaKnown RBP11.84□□□□□ -0.51
NR1H3-228ENST00000525441 FAM74A3Q4VXF1 159 aa11.84□□□□□ -0.51
NR1H3-228ENST00000525441 RPL36ALQ969Q0 106 aaKnown RBP11.84□□□□□ -0.51
NR1H3-228ENST00000525441 Q9UF83 564 aa11.84□□□□□ -0.51
NR1H3-228ENST00000525441 TRBV20OR9-2A0A075B6H5 130 aa11.83□□□□□ -0.52
NR1H3-228ENST00000525441 C19orf71A6NCJ1 209 aa11.83□□□□□ -0.52
NR1H3-228ENST00000525441 IBA57-AS1B1ANH7 110 aa11.83□□□□□ -0.52
NR1H3-228ENST00000525441 CEBPGP53567 150 aa11.83□□□□□ -0.52
NR1H3-228ENST00000525441 ZNF56Q15929 161 aa11.83□□□□□ -0.52
NR1H3-228ENST00000525441 NDUFA5Q16718 116 aa11.83□□□□□ -0.52
NR1H3-228ENST00000525441 FER1L6-AS1Q8NA97 138 aa11.83□□□□□ -0.52
NR1H3-228ENST00000525441 MUC21A0A0G2JKD1 596 aa11.82□□□□□ -0.52
NR1H3-228ENST00000525441 MUC21A0A140T8X8 626 aa11.82□□□□□ -0.52
NR1H3-228ENST00000525441 ZNF727A8MUV8 499 aa11.82□□□□□ -0.52
NR1H3-228ENST00000525441 IGHV3-30P01768 117 aa11.82□□□□□ -0.52
NR1H3-228ENST00000525441 IGHV3-33P01772 117 aa11.82□□□□□ -0.52
NR1H3-228ENST00000525441 SMIM17P0DL12 118 aa11.82□□□□□ -0.52
NR1H3-228ENST00000525441 IGHV3-30-3P0DP02 117 aa11.82□□□□□ -0.52
NR1H3-228ENST00000525441 IGHV3-30-5P0DP03 117 aa11.82□□□□□ -0.52
NR1H3-228ENST00000525441 AP1S3Q96PC3 154 aa11.82□□□□□ -0.52
NR1H3-228ENST00000525441 SMIM7Q9BQ49 75 aa11.82□□□□□ -0.52
NR1H3-228ENST00000525441 TPPP3Q9BW30 176 aa11.82□□□□□ -0.52
NR1H3-228ENST00000525441 TRBV7-3A0A075B6L6 115 aa11.81□□□□□ -0.52
NR1H3-228ENST00000525441 SSTP61278 116 aa11.81□□□□□ -0.52
NR1H3-228ENST00000525441 CACNG7P62955 275 aa11.81□□□□□ -0.52
NR1H3-228ENST00000525441 TMEM218A2RU14 115 aa11.8□□□□□ -0.52
NR1H3-228ENST00000525441 F2Z2F3 143 aa11.8□□□□□ -0.52
NR1H3-228ENST00000525441 F5H697 171 aa11.8□□□□□ -0.52
NR1H3-228ENST00000525441 PSCAO43653 123 aa11.8□□□□□ -0.52
NR1H3-228ENST00000525441 IGLC6P0CF74 106 aa11.8□□□□□ -0.52
NR1H3-228ENST00000525441 GZMBP10144 247 aa11.8□□□□□ -0.52
NR1H3-228ENST00000525441 KRTAP10-2P60368 255 aa11.8□□□□□ -0.52
NR1H3-228ENST00000525441 LAGE3Q14657 143 aa11.8□□□□□ -0.52
NR1H3-228ENST00000525441 OR10G8Q8NGN5 311 aa11.8□□□□□ -0.52
NR1H3-228ENST00000525441 UBE2D3P61077 147 aa11.79□□□□□ -0.52
NR1H3-228ENST00000525441 UBE2D2P62837 147 aa11.79□□□□□ -0.52
NR1H3-228ENST00000525441 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.79□□□□□ -0.52
NR1H3-228ENST00000525441 PGPEP1Q9NXJ5 209 aa11.79□□□□□ -0.52
NR1H3-228ENST00000525441 URGCP-MRPS24S4R325 110 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms