RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 ARFGEF3Q5TH69 2177 aa2.15□□□□□ -2.07
SKP1-209ENST00000522552 PTPRDP23468 1912 aa2.15□□□□□ -2.07
SKP1-209ENST00000522552 HCG22E2RYF7 251 aa2.15□□□□□ -2.07
SKP1-209ENST00000522552 ASIPP42127 132 aa2.15□□□□□ -2.07
SKP1-209ENST00000522552 C4orf3Q8WVX3 66 aa2.15□□□□□ -2.07
SKP1-209ENST00000522552 ALPK2Q86TB3 2170 aa2.15□□□□□ -2.07
SKP1-209ENST00000522552 KDM5DQ9BY66 1539 aa2.14□□□□□ -2.07
SKP1-209ENST00000522552 TRAV13-2A0A0B4J235 113 aa2.14□□□□□ -2.07
SKP1-209ENST00000522552 TRBV10-3A0A0K0K1G6 114 aa2.14□□□□□ -2.07
SKP1-209ENST00000522552 IFI27L1Q96BM0 104 aa2.14□□□□□ -2.07
SKP1-209ENST00000522552 ABCC3O15438 1527 aa2.14□□□□□ -2.07
SKP1-209ENST00000522552 TOPAZ1Q8N9V7 1692 aa2.14□□□□□ -2.07
SKP1-209ENST00000522552 HMCN1Q96RW7 5635 aa2.13□□□□□ -2.07
SKP1-209ENST00000522552 COL4A2P08572 1712 aa2.13□□□□□ -2.07
SKP1-209ENST00000522552 PXDNLA1KZ92 1463 aa2.13□□□□□ -2.07
SKP1-209ENST00000522552 GOLGA3Q08378 1498 aa2.13□□□□□ -2.07
SKP1-209ENST00000522552 COL1A2P08123 1366 aa2.13□□□□□ -2.07
SKP1-209ENST00000522552 K7EP34 96 aa2.13□□□□□ -2.07
SKP1-209ENST00000522552 NUPR1O60356 82 aa2.13□□□□□ -2.07
SKP1-209ENST00000522552 GNG11P61952 73 aa2.13□□□□□ -2.07
SKP1-209ENST00000522552 PEA15Q15121 130 aa2.13□□□□□ -2.07
SKP1-209ENST00000522552 C15orf53Q8NAA6 179 aa2.13□□□□□ -2.07
SKP1-209ENST00000522552 TSLPQ969D9 159 aa2.13□□□□□ -2.07
SKP1-209ENST00000522552 C22orf24Q9Y442 160 aa2.13□□□□□ -2.07
SKP1-209ENST00000522552 TNS1Q9HBL0 1735 aaKnown RBP2.13□□□□□ -2.07
SKP1-209ENST00000522552 SHROOM2Q13796 1616 aa2.13□□□□□ -2.07
SKP1-209ENST00000522552 DISP1Q96F81 1524 aa2.13□□□□□ -2.07
SKP1-209ENST00000522552 SPAG17Q6Q759 2223 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 NMBP08949 121 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 FAM74A1Q5RGS3 127 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 TVP23CQ96ET8 276 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 LIMD2Q9BT23 127 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 MARF1Q9Y4F3 1742 aaKnown RBP2.12□□□□□ -2.07
SKP1-209ENST00000522552 MAP3K1Q13233 1512 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 MDC1Q14676 2089 aaKnown RBP2.12□□□□□ -2.07
SKP1-209ENST00000522552 CR1P17927 2039 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 TCHHQ07283 1943 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 TRAV12-3A0A0B4J271 114 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 IGKV2-24A0A0C4DH68 120 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 TRBV10-1A0A0K0K1A3 114 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 H3BRM9 83 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 H3BRN7 92 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 GYPAP02724 150 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 RNASE2P10153 161 aaKnown RBP2.12□□□□□ -2.07
SKP1-209ENST00000522552 CCL8P80075 99 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 TDRG1Q3Y452 100 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 IGFL1Q6UW32 110 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 FAM213BQ8TBF2 198 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 MYOZ3Q8TDC0 251 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 ODF3Q96PU9 254 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 CYTL1Q9NRR1 136 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 CDC42SE1Q9NRR8 79 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 CHD1O14646 1710 aa2.12□□□□□ -2.07
SKP1-209ENST00000522552 LAMC3Q9Y6N6 1575 aa2.11□□□□□ -2.07
SKP1-209ENST00000522552 ABCA4P78363 2273 aa2.11□□□□□ -2.07
SKP1-209ENST00000522552 A0A0J9YY99 117 aa2.11□□□□□ -2.07
SKP1-209ENST00000522552 TRBV7-7A0A0K0K1E9 115 aa2.11□□□□□ -2.07
SKP1-209ENST00000522552 NUPR2A6NF83 97 aa2.11□□□□□ -2.07
SKP1-209ENST00000522552 ATOX1O00244 68 aa2.11□□□□□ -2.07
SKP1-209ENST00000522552 MRPS14O60783 128 aaKnown RBP2.11□□□□□ -2.07
SKP1-209ENST00000522552 KRTDAPP60985 99 aa2.11□□□□□ -2.07
SKP1-209ENST00000522552 SEC11AP67812 179 aa2.11□□□□□ -2.07
SKP1-209ENST00000522552 NDUFA11Q86Y39 141 aa2.11□□□□□ -2.07
SKP1-209ENST00000522552 CYYR1Q96J86 154 aa2.11□□□□□ -2.07
SKP1-209ENST00000522552 C20orf78Q9BR46 151 aa2.11□□□□□ -2.07
SKP1-209ENST00000522552 CYP4F30PQ9H0H9 118 aa2.11□□□□□ -2.07
SKP1-209ENST00000522552 MRPL36Q9P0J6 103 aaKnown RBP2.11□□□□□ -2.07
SKP1-209ENST00000522552 TANC1Q9C0D5 1861 aa2.11□□□□□ -2.07
SKP1-209ENST00000522552 PRDM15P57071 1507 aaPredicted RBP2.11□□□□□ -2.07
SKP1-209ENST00000522552 SIP14410 1827 aa2.11□□□□□ -2.07
SKP1-209ENST00000522552 CDK12Q9NYV4 1490 aaPredicted RBP2.11□□□□□ -2.07
SKP1-209ENST00000522552 RRBP1Q9P2E9 1410 aaKnown RBP2.1□□□□□ -2.07
SKP1-209ENST00000522552 TRGV4A0A0C4DH28 118 aa2.1□□□□□ -2.07
SKP1-209ENST00000522552 NAP1L6A6NFF2 107 aa2.1□□□□□ -2.07
SKP1-209ENST00000522552 SIX6O95475 246 aa2.1□□□□□ -2.07
SKP1-209ENST00000522552 SPTBP11277 2137 aa2.1□□□□□ -2.07
SKP1-209ENST00000522552 RNASE3P12724 160 aaKnown RBP2.1□□□□□ -2.07
SKP1-209ENST00000522552 FAUP35544 74 aaKnown RBP2.1□□□□□ -2.07
SKP1-209ENST00000522552 DMAC1Q96GE9 116 aa2.1□□□□□ -2.07
SKP1-209ENST00000522552 TTTY12Q9BZ98 90 aa2.1□□□□□ -2.07
SKP1-209ENST00000522552 ICE1Q9Y2F5 2266 aa2.1□□□□□ -2.07
SKP1-209ENST00000522552 UACAQ9BZF9 1416 aa2.1□□□□□ -2.07
SKP1-209ENST00000522552 RGPD4Q7Z3J3 1758 aa2.09□□□□□ -2.07
SKP1-209ENST00000522552 IGKV3-7A0A075B6H7 116 aa2.09□□□□□ -2.07
SKP1-209ENST00000522552 TRBV6-4A0A1B0GX49 114 aa2.09□□□□□ -2.07
SKP1-209ENST00000522552 CYB5AP00167 134 aa2.09□□□□□ -2.07
SKP1-209ENST00000522552 C10orf55Q5SWW7 151 aa2.09□□□□□ -2.07
SKP1-209ENST00000522552 C6orf52Q5T4I8 152 aa2.09□□□□□ -2.07
SKP1-209ENST00000522552 LINC00299Q6ZSB3 139 aa2.09□□□□□ -2.07
SKP1-209ENST00000522552 MON2Q7Z3U7 1717 aa2.09□□□□□ -2.07
SKP1-209ENST00000522552 NWD2Q9ULI1 1742 aa2.09□□□□□ -2.07
SKP1-209ENST00000522552 DOCK11Q5JSL3 2073 aa2.09□□□□□ -2.08
SKP1-209ENST00000522552 TET3O43151 1660 aa2.09□□□□□ -2.08
SKP1-209ENST00000522552 MAGI2Q86UL8 1455 aa2.09□□□□□ -2.08
SKP1-209ENST00000522552 CRYM-AS1A6NIL9 109 aa2.09□□□□□ -2.08
SKP1-209ENST00000522552 PPLO60437 1756 aa2.08□□□□□ -2.08
SKP1-209ENST00000522552 MED12Q93074 2177 aa2.08□□□□□ -2.08
SKP1-209ENST00000522552 SFT2D2O95562 160 aa2.08□□□□□ -2.08
SKP1-209ENST00000522552 PPYP01298 95 aa2.08□□□□□ -2.08
SKP1-209ENST00000522552 LCE3CQ5T5A8 94 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms