RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 CRYGDP07320 174 aa12.61□□□□□ -0.39
VEGFA-222ENST00000520948 FOXA3P55318 350 aaPredicted RBP12.61□□□□□ -0.39
VEGFA-222ENST00000520948 LYZL1Q6UWQ5 148 aa12.61□□□□□ -0.39
VEGFA-222ENST00000520948 GTSF1Q8WW33 167 aa12.61□□□□□ -0.39
VEGFA-222ENST00000520948 SAMD10Q9BYL1 202 aa12.61□□□□□ -0.39
VEGFA-222ENST00000520948 MUC21A0A0G2JKD1 596 aa12.6□□□□□ -0.39
VEGFA-222ENST00000520948 MUC21A0A140T8X8 626 aa12.6□□□□□ -0.39
VEGFA-222ENST00000520948 A8MWL6 223 aa12.6□□□□□ -0.39
VEGFA-222ENST00000520948 ADIRFQ15847 76 aa12.6□□□□□ -0.39
VEGFA-222ENST00000520948 WDR73Q6P4I2 378 aa12.6□□□□□ -0.39
VEGFA-222ENST00000520948 V9GYV3 84 aa12.6□□□□□ -0.39
VEGFA-222ENST00000520948 PKHD1P08F94 4074 aa12.59□□□□□ -0.39
VEGFA-222ENST00000520948 PAX4O43316 350 aa12.59□□□□□ -0.39
VEGFA-222ENST00000520948 CTRLP40313 264 aa12.59□□□□□ -0.39
VEGFA-222ENST00000520948 COMMD7Q86VX2 200 aa12.59□□□□□ -0.39
VEGFA-222ENST00000520948 CNFNQ9BYD5 112 aa12.59□□□□□ -0.39
VEGFA-222ENST00000520948 TMEM218A2RU14 115 aa12.58□□□□□ -0.4
VEGFA-222ENST00000520948 PRSS29PA6NIE9 313 aa12.58□□□□□ -0.4
VEGFA-222ENST00000520948 RTL8CO15255 209 aa12.58□□□□□ -0.4
VEGFA-222ENST00000520948 P0DMU3 169 aa12.58□□□□□ -0.4
VEGFA-222ENST00000520948 FAM231AP0DMU4 169 aa12.58□□□□□ -0.4
VEGFA-222ENST00000520948 FAM231CP0DMU5 169 aa12.58□□□□□ -0.4
VEGFA-222ENST00000520948 CACNG7P62955 275 aa12.58□□□□□ -0.4
VEGFA-222ENST00000520948 SPANXN1Q5VSR9 72 aa12.58□□□□□ -0.4
VEGFA-222ENST00000520948 Q6ZSN1 163 aa12.58□□□□□ -0.4
VEGFA-222ENST00000520948 C15orf54Q8N8G6 183 aa12.58□□□□□ -0.4
VEGFA-222ENST00000520948 GFRA4Q9GZZ7 299 aa12.58□□□□□ -0.4
VEGFA-222ENST00000520948 MSRB1Q9NZV6 116 aa12.58□□□□□ -0.4
VEGFA-222ENST00000520948 KIF25-AS1Q9Y6Z4 181 aa12.58□□□□□ -0.4
VEGFA-222ENST00000520948 A0A096LPF7 62 aa12.57□□□□□ -0.4
VEGFA-222ENST00000520948 IGHV3-73A0A0B4J1V6 119 aa12.57□□□□□ -0.4
VEGFA-222ENST00000520948 TRBV6-4A0A1B0GX49 114 aa12.57□□□□□ -0.4
VEGFA-222ENST00000520948 FAM231BA6NCW3 169 aa12.57□□□□□ -0.4
VEGFA-222ENST00000520948 NUDT3O95989 172 aa12.57□□□□□ -0.4
VEGFA-222ENST00000520948 SLC25A29Q8N8R3 303 aa12.57□□□□□ -0.4
VEGFA-222ENST00000520948 OR10G8Q8NGN5 311 aa12.57□□□□□ -0.4
VEGFA-222ENST00000520948 TSKUQ8WUA8 353 aa12.57□□□□□ -0.4
VEGFA-222ENST00000520948 DNAH17Q9UFH2 4485 aa12.57□□□□□ -0.4
VEGFA-222ENST00000520948 A0A087WWL8 130 aa12.56□□□□□ -0.4
VEGFA-222ENST00000520948 RHODO00212 210 aa12.56□□□□□ -0.4
VEGFA-222ENST00000520948 ADCYAP1P18509 176 aa12.56□□□□□ -0.4
VEGFA-222ENST00000520948 NTF3P20783 257 aa12.56□□□□□ -0.4
VEGFA-222ENST00000520948 TPPP3Q9BW30 176 aa12.56□□□□□ -0.4
VEGFA-222ENST00000520948 LINC00315P59091 139 aa12.55□□□□□ -0.4
VEGFA-222ENST00000520948 SSTP61278 116 aa12.55□□□□□ -0.4
VEGFA-222ENST00000520948 PNRC1Q12796 327 aaPredicted RBP12.55□□□□□ -0.4
VEGFA-222ENST00000520948 IGLV2-18A0A075B6J9 118 aa12.54□□□□□ -0.4
VEGFA-222ENST00000520948 K7EQD1 137 aa12.54□□□□□ -0.4
VEGFA-222ENST00000520948 RNF212Q495C1 297 aa12.54□□□□□ -0.4
VEGFA-222ENST00000520948 ICOSQ9Y6W8 199 aa12.54□□□□□ -0.4
VEGFA-222ENST00000520948 DYNC1H1Q14204 4646 aaKnown RBP12.53□□□□□ -0.4
VEGFA-222ENST00000520948 LOC100131303A0A0U1RQF7 123 aa12.53□□□□□ -0.4
VEGFA-222ENST00000520948 GYPEP15421 78 aa12.53□□□□□ -0.4
VEGFA-222ENST00000520948 MRPL23Q16540 153 aaKnown RBP12.53□□□□□ -0.4
VEGFA-222ENST00000520948 FAM74A4Q5TZK3 123 aa12.53□□□□□ -0.4
VEGFA-222ENST00000520948 UBE2DNLQ8IWF7 75 aa12.53□□□□□ -0.4
VEGFA-222ENST00000520948 C14orf178Q8N769 122 aaPredicted RBP12.53□□□□□ -0.4
VEGFA-222ENST00000520948 SEC11CQ9BY50 192 aa12.53□□□□□ -0.4
VEGFA-222ENST00000520948 SMIM27A0A1W2PRY6 76 aa12.52□□□□□ -0.41
VEGFA-222ENST00000520948 HIGD1CA8MV81 97 aa12.52□□□□□ -0.41
VEGFA-222ENST00000520948 RHOHQ15669 191 aa12.52□□□□□ -0.41
VEGFA-222ENST00000520948 ESRGQ1W209 222 aa12.52□□□□□ -0.41
VEGFA-222ENST00000520948 C10orf91Q5T1B1 145 aa12.52□□□□□ -0.41
VEGFA-222ENST00000520948 PGLYRP4Q96LB8 373 aa12.52□□□□□ -0.41
VEGFA-222ENST00000520948 AP1S3Q96PC3 154 aa12.52□□□□□ -0.41
VEGFA-222ENST00000520948 PKD1P98161 4303 aa12.51□□□□□ -0.41
VEGFA-222ENST00000520948 F8W036 122 aa12.51□□□□□ -0.41
VEGFA-222ENST00000520948 RAB4BP61018 213 aa12.51□□□□□ -0.41
VEGFA-222ENST00000520948 PRADC1Q9BSG0 188 aa12.51□□□□□ -0.41
VEGFA-222ENST00000520948 Q9UF83 564 aa12.51□□□□□ -0.41
VEGFA-222ENST00000520948 DNAH11Q96DT5 4516 aa12.5□□□□□ -0.41
VEGFA-222ENST00000520948 RYR1P21817 5038 aa12.5□□□□□ -0.41
VEGFA-222ENST00000520948 TRGC1P0CF51 173 aa12.5□□□□□ -0.41
VEGFA-222ENST00000520948 EVI2AP22794 236 aa12.5□□□□□ -0.41
VEGFA-222ENST00000520948 TWIST1Q15672 202 aa12.5□□□□□ -0.41
VEGFA-222ENST00000520948 NUP35Q8NFH5 326 aa12.5□□□□□ -0.41
VEGFA-222ENST00000520948 LINC00588Q9Y4M8 146 aa12.5□□□□□ -0.41
VEGFA-222ENST00000520948 PPP1R2P9O14990 202 aa12.49□□□□□ -0.41
VEGFA-222ENST00000520948 LINC00694P0DN24 101 aa12.49□□□□□ -0.41
VEGFA-222ENST00000520948 NEGR1Q7Z3B1 354 aa12.49□□□□□ -0.41
VEGFA-222ENST00000520948 NAT8BQ9UHF3 227 aa12.49□□□□□ -0.41
VEGFA-222ENST00000520948 A0A1B0GUT8 65 aa12.48□□□□□ -0.41
VEGFA-222ENST00000520948 SMIM17P0DL12 118 aa12.48□□□□□ -0.41
VEGFA-222ENST00000520948 SRIP30626 198 aa12.48□□□□□ -0.41
VEGFA-222ENST00000520948 CCL18P55774 89 aa12.48□□□□□ -0.41
VEGFA-222ENST00000520948 FAM3BP58499 235 aaPredicted RBP12.48□□□□□ -0.41
VEGFA-222ENST00000520948 LYPD5Q6UWN5 251 aa12.48□□□□□ -0.41
VEGFA-222ENST00000520948 ANAPC16Q96DE5 110 aa12.48□□□□□ -0.41
VEGFA-222ENST00000520948 Q6ZR54 194 aa12.47□□□□□ -0.41
VEGFA-222ENST00000520948 SH2D6Q7Z4S9 175 aa12.47□□□□□ -0.41
VEGFA-222ENST00000520948 DPH3P1Q9H4G8 78 aa12.47□□□□□ -0.41
VEGFA-222ENST00000520948 CARHSP1Q9Y2V2 147 aaKnown RBP12.47□□□□□ -0.41
VEGFA-222ENST00000520948 TRBV10-1A0A0K0K1A3 114 aa12.46□□□□□ -0.41
VEGFA-222ENST00000520948 MT-ND4LP03901 98 aa12.46□□□□□ -0.41
VEGFA-222ENST00000520948 ZNF56Q15929 161 aa12.46□□□□□ -0.41
VEGFA-222ENST00000520948 F5H697 171 aa12.45□□□□□ -0.42
VEGFA-222ENST00000520948 TIRAPP58753 221 aa12.45□□□□□ -0.42
VEGFA-222ENST00000520948 ZNRF2Q8NHG8 242 aa12.45□□□□□ -0.42
VEGFA-222ENST00000520948 BORCS7Q96B45 105 aa12.45□□□□□ -0.42
VEGFA-222ENST00000520948 UPK3BQ9BT76 320 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms