RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 RAB4AP20338 218 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 M6PRP20645 277 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 S100A7P31151 101 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 PRSS3P35030 304 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 PSMB3P49720 205 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 SPCS3P61009 180 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 UBE2MP61081 183 aaKnown RBP1.86□□□□□ -2.11
HDAC2-208ENST00000520746 YPEL3P61236 119 aaPredicted RBP1.86□□□□□ -2.11
HDAC2-208ENST00000520746 IFITM3Q01628 133 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 HIST1H1AQ02539 215 aaPredicted RBP1.86□□□□□ -2.11
HDAC2-208ENST00000520746 SSBP1Q04837 148 aaKnown RBP1.86□□□□□ -2.11
HDAC2-208ENST00000520746 SMCO1Q147U7 214 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 ESRGQ1W209 222 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 SP6Q3SY56 376 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 GCSAMLQ5JQS6 135 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 EIF5AL1Q6IS14 154 aaKnown RBP1.86□□□□□ -2.11
HDAC2-208ENST00000520746 TMED4Q7Z7H5 227 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 COMMD7Q86VX2 200 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 C1orf158Q8N1D5 194 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 ST20-AS1Q8NBB2 130 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 OR5H6Q8NGV6 325 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 OR2T35Q8NGX2 323 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 RXFP4Q8TDU9 374 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 MARVELD1Q9BSK0 173 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 FXYD6Q9H0Q3 95 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 MRPL36Q9P0J6 103 aaKnown RBP1.86□□□□□ -2.11
HDAC2-208ENST00000520746 DOK5Q9P104 306 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 LSM2Q9Y333 95 aaKnown RBP1.86□□□□□ -2.11
HDAC2-208ENST00000520746 V9GYH0 126 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 DNAH1Q9P2D7 4330 aa1.86□□□□□ -2.11
HDAC2-208ENST00000520746 DMBT1Q9UGM3 2413 aaPredicted RBP1.86□□□□□ -2.11
HDAC2-208ENST00000520746 A0A0A6YYH2 397 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 IGHV3OR16-9A0A0B4J2B5 98 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 PIGBOS1A0A0B4J2F0 54 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 A0A0D9SG52 128 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 A0A0J9YX75 114 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 A6NJ64 397 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 ISLRO14498 428 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 PLA2G10O15496 165 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 IL5P05113 134 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 PRB4P10163 310 aaPredicted RBP1.85□□□□□ -2.11
HDAC2-208ENST00000520746 ORM2P19652 201 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 EVI2AP22794 236 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 S100A11P31949 105 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 PIGPP57054 158 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 ZNF90Q03938 601 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 SCGB2B2Q4G0G5 96 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 RNASE10Q5GAN6 216 aaKnown RBP1.85□□□□□ -2.11
HDAC2-208ENST00000520746 C1orf194Q5T5A4 169 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 PRSS54Q6PEW0 395 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 BAP18Q8IXM2 172 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 C12orf45Q8N5I9 185 aaPredicted RBP1.85□□□□□ -2.11
HDAC2-208ENST00000520746 SPANXA2-OT1Q8N9U9 137 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 RNASEH2CQ8TDP1 164 aaKnown RBP1.85□□□□□ -2.11
HDAC2-208ENST00000520746 DEFB104AQ8WTQ1 72 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 SMIM4Q8WVI0 70 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 PRRT1Q99946 306 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 SLC25A21Q9BQT8 299 aaPredicted RBP1.85□□□□□ -2.11
HDAC2-208ENST00000520746 ARL6Q9H0F7 186 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 MIXL1Q9H2W2 232 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 C14orf166Q9Y224 244 aaKnown RBP1.85□□□□□ -2.11
HDAC2-208ENST00000520746 PRELID1Q9Y255 219 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 MRPS16Q9Y3D3 137 aaKnown RBP1.85□□□□□ -2.11
HDAC2-208ENST00000520746 TMEM56-RWDD3S4R434 201 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 FRAS1Q86XX4 4008 aa1.85□□□□□ -2.11
HDAC2-208ENST00000520746 ALMS1Q8TCU4 4167 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 A0A087WTM6 91 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 TRGV1A0A0A0MS02 117 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 TRAV12-3A0A0B4J271 114 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 TRGV4A0A0C4DH28 118 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 A0A1W2PPV4 95 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 ANKRD20A5PA0PJZ0 165 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 SMLR1H3BR10 107 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 TAAR5O14804 337 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 ARPC5O15511 151 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 IGKV1-39P01597 117 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 IGKV1-5P01602 117 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 IGHV3-53P01767 116 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 IGKV1D-39P04432 117 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 S100A9P06702 114 aaKnown RBP1.84□□□□□ -2.11
HDAC2-208ENST00000520746 OR5G3P0C626 314 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 OR5AC1P0C628 307 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 IGLC1P0CG04 106 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 SULT1A3P0DMM9 295 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 SULT1A4P0DMN0 295 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 TPT1P13693 172 aaKnown RBP1.84□□□□□ -2.11
HDAC2-208ENST00000520746 RAB5AP20339 215 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 TSPOP30536 169 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 PFN2P35080 140 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 TAS2R60P59551 318 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 RAB2AP61019 212 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 SUPT4H1P63272 117 aaKnown RBP1.84□□□□□ -2.11
HDAC2-208ENST00000520746 PSG3Q16557 428 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 CLLU1Q5K131 121 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 SAMD13Q5VXD3 122 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 TEX261Q6UWH6 196 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 S100A7AQ86SG5 101 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 SLC51BQ86UW2 128 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 TMEM229BQ8NBD8 167 aa1.84□□□□□ -2.11
HDAC2-208ENST00000520746 ZNF680Q8NEM1 530 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms