RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 FAM19A4Q96LR4 140 aa6.42□□□□□ -1.38
CTNNA1-221ENST00000520339 PYGO2Q9BRQ0 406 aa6.42□□□□□ -1.38
CTNNA1-221ENST00000520339 KRTAP4-5Q9BYR2 181 aa6.42□□□□□ -1.38
CTNNA1-221ENST00000520339 AAMDCQ9H7C9 122 aa6.42□□□□□ -1.38
CTNNA1-221ENST00000520339 Q9H8V8 135 aa6.42□□□□□ -1.38
CTNNA1-221ENST00000520339 VAX2Q9UIW0 290 aa6.42□□□□□ -1.38
CTNNA1-221ENST00000520339 A0A1B0GV72 72 aa6.41□□□□□ -1.38
CTNNA1-221ENST00000520339 IFITM10A6NMD0 228 aa6.41□□□□□ -1.38
CTNNA1-221ENST00000520339 C9JQL5 133 aa6.41□□□□□ -1.38
CTNNA1-221ENST00000520339 H3BNG1 76 aa6.41□□□□□ -1.38
CTNNA1-221ENST00000520339 ZNF324O75467 553 aaPredicted RBP6.41□□□□□ -1.38
CTNNA1-221ENST00000520339 SLC25A5P05141 298 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-221ENST00000520339 HIST1H1EP10412 219 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-221ENST00000520339 GCHFRP30047 84 aa6.41□□□□□ -1.38
CTNNA1-221ENST00000520339 RPL19P84098 196 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-221ENST00000520339 MEF2BQ02080 365 aaPredicted RBP6.41□□□□□ -1.38
CTNNA1-221ENST00000520339 ERCC8Q13216 396 aa6.41□□□□□ -1.38
CTNNA1-221ENST00000520339 ESRGQ1W209 222 aa6.41□□□□□ -1.38
CTNNA1-221ENST00000520339 PQLC2Q6ZP29 291 aa6.41□□□□□ -1.38
CTNNA1-221ENST00000520339 MTURNQ8N3F0 131 aa6.41□□□□□ -1.38
CTNNA1-221ENST00000520339 LINC00477Q96M19 166 aa6.41□□□□□ -1.38
CTNNA1-221ENST00000520339 LINC00467Q9BRT7 94 aa6.41□□□□□ -1.38
CTNNA1-221ENST00000520339 UPK3BQ9BT76 320 aa6.41□□□□□ -1.38
CTNNA1-221ENST00000520339 AGPAT4-IT1Q9H0P7 198 aa6.41□□□□□ -1.38
CTNNA1-221ENST00000520339 TMEM167BQ9NRX6 74 aa6.41□□□□□ -1.38
CTNNA1-221ENST00000520339 A0A0J9YY99 117 aa6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 C7orf71A4D174 169 aa6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 C16orf90A8MZG2 172 aa6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 SNURFLB1AK76 121 aa6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 KLLNB2CW77 178 aa6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 OR7C2O60412 319 aa6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 SRP19P09132 144 aaKnown RBP6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 PYYP10082 97 aa6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 UBE2L3P68036 154 aaKnown RBP6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 PDE6HQ13956 83 aa6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 ZNF674Q2M3X9 581 aa6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 Q6ZTI0 123 aa6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 LINC01551Q86U37 167 aa6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 C11orf72Q8NBR9 251 aa6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 VSIG2Q96IQ7 327 aa6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 FAM167A-AS1Q96KT0 104 aa6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 PACRGQ96M98 296 aaPredicted RBP6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 C18orf15Q96N68 181 aa6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 SLC25A2Q9BXI2 301 aa6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 KRTAP1-5Q9BYS1 174 aa6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 ARL2-SNX15V9GYD0 113 aa6.4□□□□□ -1.38
CTNNA1-221ENST00000520339 APOBP04114 4563 aaKnown RBP6.4□□□□□ -1.39
CTNNA1-221ENST00000520339 NACAE9PAV3 2078 aa6.39□□□□□ -1.39
CTNNA1-221ENST00000520339 PAGE4O60829 102 aa6.39□□□□□ -1.39
CTNNA1-221ENST00000520339 CRISP2P16562 243 aa6.39□□□□□ -1.39
CTNNA1-221ENST00000520339 UBE2G2P60604 165 aa6.39□□□□□ -1.39
CTNNA1-221ENST00000520339 IQCJQ1A5X6 159 aa6.39□□□□□ -1.39
CTNNA1-221ENST00000520339 C9orf47Q6ZRZ4 202 aa6.39□□□□□ -1.39
CTNNA1-221ENST00000520339 EXOC3-AS1Q8N2X6 119 aa6.39□□□□□ -1.39
CTNNA1-221ENST00000520339 ZNF664Q8N3J9 261 aa6.39□□□□□ -1.39
CTNNA1-221ENST00000520339 ZFAND2AQ8N6M9 145 aa6.39□□□□□ -1.39
CTNNA1-221ENST00000520339 CYB561D1Q8N8Q1 229 aa6.39□□□□□ -1.39
CTNNA1-221ENST00000520339 ZNF479Q96JC4 524 aa6.39□□□□□ -1.39
CTNNA1-221ENST00000520339 TXNDC17Q9BRA2 123 aa6.39□□□□□ -1.39
CTNNA1-221ENST00000520339 MRPS16Q9Y3D3 137 aaKnown RBP6.39□□□□□ -1.39
CTNNA1-221ENST00000520339 MUC4Q99102 2169 aa6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 A0A087WWC5 75 aa6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 A0A096LPF7 62 aa6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 F6UZH7 168 aa6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 TMEM250H0YL14 139 aa6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 K7ERU9 68 aa6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 PDE6DO43924 150 aa6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 SPINK4O60575 86 aa6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 CDK2AP2O75956 126 aa6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 RNASE4P34096 147 aaKnown RBP6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 UBE2V1Q13404 147 aa6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 TTC32Q5I0X7 151 aa6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 COA6Q5JTJ3 125 aaKnown RBP6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 CST9LP1Q5W188 147 aa6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 BLNKQ8WV28 456 aa6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 YPEL4Q96NS1 127 aa6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 VGLL1Q99990 258 aa6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 VPS25Q9BRG1 176 aa6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 ALKBH7Q9BT30 221 aaPredicted RBP6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 PAXXQ9BUH6 204 aa6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 PRO1933Q9H354 126 aa6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 Q9H3A6 140 aa6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 KLF12Q9Y4X4 402 aa6.38□□□□□ -1.39
CTNNA1-221ENST00000520339 TRGV2A0A075B6R0 118 aa6.37□□□□□ -1.39
CTNNA1-221ENST00000520339 IGKV2-40A0A087WW87 121 aaPredicted RBP6.37□□□□□ -1.39
CTNNA1-221ENST00000520339 TRGV1A0A0A0MS02 117 aa6.37□□□□□ -1.39
CTNNA1-221ENST00000520339 IGKV2D-40P01614 121 aaPredicted RBP6.37□□□□□ -1.39
CTNNA1-221ENST00000520339 OR10J4P0C629 311 aa6.37□□□□□ -1.39
CTNNA1-221ENST00000520339 GZMBP10144 247 aa6.37□□□□□ -1.39
CTNNA1-221ENST00000520339 PRR9Q5T870 116 aa6.37□□□□□ -1.39
CTNNA1-221ENST00000520339 Q6ZQT7 251 aa6.37□□□□□ -1.39
CTNNA1-221ENST00000520339 ZNF492Q9P255 531 aa6.37□□□□□ -1.39
CTNNA1-221ENST00000520339 A0A1W2PRE2 83 aa6.36□□□□□ -1.39
CTNNA1-221ENST00000520339 PHOX2AO14813 284 aa6.36□□□□□ -1.39
CTNNA1-221ENST00000520339 GPX1P07203 203 aa6.36□□□□□ -1.39
CTNNA1-221ENST00000520339 TCL1AP56279 114 aa6.36□□□□□ -1.39
CTNNA1-221ENST00000520339 NDUFA6P56556 154 aa6.36□□□□□ -1.39
CTNNA1-221ENST00000520339 IBA57Q5T440 356 aaKnown RBP6.36□□□□□ -1.39
CTNNA1-221ENST00000520339 SPATA12Q7Z6I5 190 aa6.36□□□□□ -1.39
CTNNA1-221ENST00000520339 FXYD5Q96DB9 178 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms