RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 HIST1H2BMQ99879 126 aa6.54□□□□□ -1.36
HDAC3-215ENST00000519474 LINC00467Q9BRT7 94 aa6.54□□□□□ -1.36
HDAC3-215ENST00000519474 MAP1LC3BQ9GZQ8 125 aa6.54□□□□□ -1.36
HDAC3-215ENST00000519474 KCNIP2Q9NS61 270 aa6.54□□□□□ -1.36
HDAC3-215ENST00000519474 A0A087WWC5 75 aa6.53□□□□□ -1.36
HDAC3-215ENST00000519474 A0A1W2PRE2 83 aa6.53□□□□□ -1.36
HDAC3-215ENST00000519474 PGPA6NDG6 321 aa6.53□□□□□ -1.36
HDAC3-215ENST00000519474 GAGE7O76087 117 aa6.53□□□□□ -1.36
HDAC3-215ENST00000519474 GAGE12FP0CL80 117 aa6.53□□□□□ -1.36
HDAC3-215ENST00000519474 GAGE12GP0CL81 117 aa6.53□□□□□ -1.36
HDAC3-215ENST00000519474 GAGE12IP0CL82 117 aa6.53□□□□□ -1.36
HDAC3-215ENST00000519474 AMTP48728 403 aa6.53□□□□□ -1.36
HDAC3-215ENST00000519474 ZNF138P52744 262 aa6.53□□□□□ -1.36
HDAC3-215ENST00000519474 SMAGPQ0VAQ4 97 aa6.53□□□□□ -1.36
HDAC3-215ENST00000519474 TMEM183BQ1AE95 376 aa6.53□□□□□ -1.36
HDAC3-215ENST00000519474 ACOT6Q3I5F7 207 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-215ENST00000519474 ANXA2RQ3ZCQ2 193 aa6.53□□□□□ -1.36
HDAC3-215ENST00000519474 PRR9Q5T870 116 aa6.53□□□□□ -1.36
HDAC3-215ENST00000519474 C11orf72Q8NBR9 251 aa6.53□□□□□ -1.36
HDAC3-215ENST00000519474 OR10G9Q8NGN4 311 aa6.53□□□□□ -1.36
HDAC3-215ENST00000519474 Q9H3A6 140 aa6.53□□□□□ -1.36
HDAC3-215ENST00000519474 KLF12Q9Y4X4 402 aa6.53□□□□□ -1.36
HDAC3-215ENST00000519474 BIRC6Q9NR09 4857 aa6.53□□□□□ -1.36
HDAC3-215ENST00000519474 VPS13DQ5THJ4 4388 aa6.52□□□□□ -1.37
HDAC3-215ENST00000519474 IGLV2-18A0A075B6J9 118 aa6.52□□□□□ -1.37
HDAC3-215ENST00000519474 RBAKDNA6NC62 111 aa6.52□□□□□ -1.37
HDAC3-215ENST00000519474 SNURFLB1AK76 121 aa6.52□□□□□ -1.37
HDAC3-215ENST00000519474 DIRC3C9JPN6 131 aa6.52□□□□□ -1.37
HDAC3-215ENST00000519474 RTL8CO15255 209 aa6.52□□□□□ -1.37
HDAC3-215ENST00000519474 NUDT3O95989 172 aa6.52□□□□□ -1.37
HDAC3-215ENST00000519474 CT83Q5H943 113 aa6.52□□□□□ -1.37
HDAC3-215ENST00000519474 Q6ZTI0 123 aa6.52□□□□□ -1.37
HDAC3-215ENST00000519474 UBE2DNLQ8IWF7 75 aa6.52□□□□□ -1.37
HDAC3-215ENST00000519474 C5orf17Q8NAS9 161 aa6.52□□□□□ -1.37
HDAC3-215ENST00000519474 OR10G7Q8NGN6 311 aa6.52□□□□□ -1.37
HDAC3-215ENST00000519474 ZNRF2Q8NHG8 242 aa6.52□□□□□ -1.37
HDAC3-215ENST00000519474 AQP10Q96PS8 301 aa6.52□□□□□ -1.37
HDAC3-215ENST00000519474 CTDSP1Q9GZU7 261 aa6.52□□□□□ -1.37
HDAC3-215ENST00000519474 TP53TG3Q9ULZ0 132 aa6.52□□□□□ -1.37
HDAC3-215ENST00000519474 LAMTOR2Q9Y2Q5 125 aa6.52□□□□□ -1.37
HDAC3-215ENST00000519474 A0A1B0GX51 115 aa6.51□□□□□ -1.37
HDAC3-215ENST00000519474 C7orf77A4D0Y5 90 aa6.51□□□□□ -1.37
HDAC3-215ENST00000519474 HMGB3O15347 200 aaKnown RBP6.51□□□□□ -1.37
HDAC3-215ENST00000519474 EVI2AP22794 236 aa6.51□□□□□ -1.37
HDAC3-215ENST00000519474 CSN1S1P47710 185 aa6.51□□□□□ -1.37
HDAC3-215ENST00000519474 TAS2R45P59539 299 aa6.51□□□□□ -1.37
HDAC3-215ENST00000519474 ZNF345Q14585 488 aa6.51□□□□□ -1.37
HDAC3-215ENST00000519474 PMVKQ15126 192 aa6.51□□□□□ -1.37
HDAC3-215ENST00000519474 TEX43Q6ZNM6 134 aa6.51□□□□□ -1.37
HDAC3-215ENST00000519474 IMMP2LQ96T52 175 aa6.51□□□□□ -1.37
HDAC3-215ENST00000519474 NDFIP1Q9BT67 221 aa6.51□□□□□ -1.37
HDAC3-215ENST00000519474 PPDPFQ9H3Y8 114 aa6.51□□□□□ -1.37
HDAC3-215ENST00000519474 RPS10P5Q9NQ39 176 aa6.51□□□□□ -1.37
HDAC3-215ENST00000519474 UQCR10Q9UDW1 63 aa6.51□□□□□ -1.37
HDAC3-215ENST00000519474 NACAE9PAV3 2078 aa6.5□□□□□ -1.37
HDAC3-215ENST00000519474 IGHV1OR15-1A0A075B7D0 117 aa6.5□□□□□ -1.37
HDAC3-215ENST00000519474 A0A1B0GVY2 172 aa6.5□□□□□ -1.37
HDAC3-215ENST00000519474 GAGE12HA6NDE8 117 aa6.5□□□□□ -1.37
HDAC3-215ENST00000519474 SPINK4O60575 86 aa6.5□□□□□ -1.37
HDAC3-215ENST00000519474 RPS10P46783 165 aaKnown RBP6.5□□□□□ -1.37
HDAC3-215ENST00000519474 FAM3BP58499 235 aaPredicted RBP6.5□□□□□ -1.37
HDAC3-215ENST00000519474 UBE2L3P68036 154 aaKnown RBP6.5□□□□□ -1.37
HDAC3-215ENST00000519474 ZNF266Q14584 549 aa6.5□□□□□ -1.37
HDAC3-215ENST00000519474 C4orf48Q5BLP8 95 aa6.5□□□□□ -1.37
HDAC3-215ENST00000519474 PQLC2Q6ZP29 291 aa6.5□□□□□ -1.37
HDAC3-215ENST00000519474 LINC00336Q6ZUF6 198 aa6.5□□□□□ -1.37
HDAC3-215ENST00000519474 STPG4Q8N801 248 aa6.5□□□□□ -1.37
HDAC3-215ENST00000519474 OR5A1Q8NGJ0 315 aa6.5□□□□□ -1.37
HDAC3-215ENST00000519474 OR2G3Q8NGZ4 309 aa6.5□□□□□ -1.37
HDAC3-215ENST00000519474 Q8TAT8 98 aa6.5□□□□□ -1.37
HDAC3-215ENST00000519474 TVP23CQ96ET8 276 aa6.5□□□□□ -1.37
HDAC3-215ENST00000519474 C18orf15Q96N68 181 aa6.5□□□□□ -1.37
HDAC3-215ENST00000519474 SMDT1Q9H4I9 107 aa6.5□□□□□ -1.37
HDAC3-215ENST00000519474 OTORQ9NRC9 128 aa6.5□□□□□ -1.37
HDAC3-215ENST00000519474 LINC00588Q9Y4M8 146 aa6.5□□□□□ -1.37
HDAC3-215ENST00000519474 LENEPQ9Y5L5 61 aa6.5□□□□□ -1.37
HDAC3-215ENST00000519474 A0A0J9YY99 117 aa6.49□□□□□ -1.37
HDAC3-215ENST00000519474 RNF222A6NCQ9 220 aa6.49□□□□□ -1.37
HDAC3-215ENST00000519474 GAGE12JA6NER3 117 aa6.49□□□□□ -1.37
HDAC3-215ENST00000519474 H3BNG1 76 aa6.49□□□□□ -1.37
HDAC3-215ENST00000519474 CRYGDP07320 174 aa6.49□□□□□ -1.37
HDAC3-215ENST00000519474 TCL1AP56279 114 aa6.49□□□□□ -1.37
HDAC3-215ENST00000519474 SERF2P84101 59 aa6.49□□□□□ -1.37
HDAC3-215ENST00000519474 GAGE4Q13068 117 aa6.49□□□□□ -1.37
HDAC3-215ENST00000519474 ESRGQ1W209 222 aa6.49□□□□□ -1.37
HDAC3-215ENST00000519474 IBA57Q5T440 356 aaKnown RBP6.49□□□□□ -1.37
HDAC3-215ENST00000519474 LYPD6BQ8NI32 183 aa6.49□□□□□ -1.37
HDAC3-215ENST00000519474 GNPNAT1Q96EK6 184 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-215ENST00000519474 VSIG2Q96IQ7 327 aa6.49□□□□□ -1.37
HDAC3-215ENST00000519474 SAMD10Q9BYL1 202 aa6.49□□□□□ -1.37
HDAC3-215ENST00000519474 MDFICQ9P1T7 246 aa6.49□□□□□ -1.37
HDAC3-215ENST00000519474 TRGV1A0A0A0MS02 117 aa6.48□□□□□ -1.37
HDAC3-215ENST00000519474 PRSS29PA6NIE9 313 aa6.48□□□□□ -1.37
HDAC3-215ENST00000519474 GNRH2O43555 120 aa6.48□□□□□ -1.37
HDAC3-215ENST00000519474 CCL18P55774 89 aa6.48□□□□□ -1.37
HDAC3-215ENST00000519474 MUC21Q5SSG8 566 aa6.48□□□□□ -1.37
HDAC3-215ENST00000519474 Q6AWC8 147 aa6.48□□□□□ -1.37
HDAC3-215ENST00000519474 RPL7L1Q6DKI1 246 aaKnown RBP6.48□□□□□ -1.37
HDAC3-215ENST00000519474 TMED6Q8WW62 240 aa6.48□□□□□ -1.37
HDAC3-215ENST00000519474 GTSF1LQ9H1H1 148 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms