RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 OR5A1Q8NGJ0 315 aa6.29□□□□□ -1.4
CTNNA1-210ENST00000518825 PLEKHB2Q96CS7 222 aa6.29□□□□□ -1.4
CTNNA1-210ENST00000518825 CITED1Q99966 193 aa6.29□□□□□ -1.4
CTNNA1-210ENST00000518825 TRAV12-2A0A075B6T6 113 aa6.29□□□□□ -1.4
CTNNA1-210ENST00000518825 MDFICQ9P1T7 246 aa6.29□□□□□ -1.4
CTNNA1-210ENST00000518825 SORL1Q92673 2214 aa6.28□□□□□ -1.4
CTNNA1-210ENST00000518825 A0A1B0GWB2 263 aa6.28□□□□□ -1.4
CTNNA1-210ENST00000518825 K7EMT4 169 aa6.28□□□□□ -1.4
CTNNA1-210ENST00000518825 EMP1P54849 157 aa6.28□□□□□ -1.4
CTNNA1-210ENST00000518825 KLHL30-AS1Q8NEE0 82 aa6.28□□□□□ -1.4
CTNNA1-210ENST00000518825 PRADC1Q9BSG0 188 aa6.28□□□□□ -1.4
CTNNA1-210ENST00000518825 SMAGPQ0VAQ4 97 aa6.28□□□□□ -1.4
CTNNA1-210ENST00000518825 TAL2Q16559 108 aa6.28□□□□□ -1.4
CTNNA1-210ENST00000518825 SAMD13Q5VXD3 122 aa6.28□□□□□ -1.4
CTNNA1-210ENST00000518825 ZFP2Q6ZN57 461 aa6.28□□□□□ -1.4
CTNNA1-210ENST00000518825 ZNF580Q9UK33 172 aa6.28□□□□□ -1.4
CTNNA1-210ENST00000518825 TEX15Q9BXT5 2789 aa6.28□□□□□ -1.4
CTNNA1-210ENST00000518825 DOPEY2Q9Y3R5 2298 aa6.28□□□□□ -1.4
CTNNA1-210ENST00000518825 C11orf86A6NJI1 115 aa6.28□□□□□ -1.4
CTNNA1-210ENST00000518825 DEFB112Q30KQ8 113 aa6.28□□□□□ -1.4
CTNNA1-210ENST00000518825 FOXI2Q6ZQN5 318 aa6.28□□□□□ -1.4
CTNNA1-210ENST00000518825 HIST1H4GQ99525 98 aa6.28□□□□□ -1.4
CTNNA1-210ENST00000518825 A0A096LNT2 108 aa6.27□□□□□ -1.41
CTNNA1-210ENST00000518825 IGHV3-16A0A0C4DH30 117 aa6.27□□□□□ -1.41
CTNNA1-210ENST00000518825 LINC01619G3V211 115 aa6.27□□□□□ -1.41
CTNNA1-210ENST00000518825 CD7P09564 240 aa6.27□□□□□ -1.41
CTNNA1-210ENST00000518825 ZNF688P0C7X2 276 aa6.27□□□□□ -1.41
CTNNA1-210ENST00000518825 AMTNQ6UX39 209 aa6.27□□□□□ -1.41
CTNNA1-210ENST00000518825 CYSLTR1Q9Y271 337 aa6.27□□□□□ -1.41
CTNNA1-210ENST00000518825 TP53TG1Q9Y2A0 90 aa6.27□□□□□ -1.41
CTNNA1-210ENST00000518825 ANKRD17O75179 2603 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-210ENST00000518825 TEX48A0A1B0GUV7 120 aa6.27□□□□□ -1.41
CTNNA1-210ENST00000518825 OR11H12B2RN74 326 aa6.27□□□□□ -1.41
CTNNA1-210ENST00000518825 IGKV3-20P01619 116 aa6.27□□□□□ -1.41
CTNNA1-210ENST00000518825 TSPEAR-AS2P59090 65 aa6.27□□□□□ -1.41
CTNNA1-210ENST00000518825 WFDC2Q14508 124 aa6.27□□□□□ -1.41
CTNNA1-210ENST00000518825 FAM159AQ6UWV7 190 aa6.27□□□□□ -1.41
CTNNA1-210ENST00000518825 OR11H1Q8NG94 326 aa6.27□□□□□ -1.41
CTNNA1-210ENST00000518825 OR11H2Q8NH07 326 aa6.27□□□□□ -1.41
CTNNA1-210ENST00000518825 C9orf85Q96MD7 179 aa6.27□□□□□ -1.41
CTNNA1-210ENST00000518825 TRAV26-1A0A087WT03 109 aa6.26□□□□□ -1.41
CTNNA1-210ENST00000518825 H3BMG7 143 aa6.26□□□□□ -1.41
CTNNA1-210ENST00000518825 RPL32P62910 135 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-210ENST00000518825 ZNRF2Q8NHG8 242 aa6.26□□□□□ -1.41
CTNNA1-210ENST00000518825 NIPBLQ6KC79 2804 aaeCLIP6.26□□□□□ -1.412e-7■■■■□ 20.4
CTNNA1-210ENST00000518825 A0A0J9YX75 114 aa6.26□□□□□ -1.41
CTNNA1-210ENST00000518825 Q8N1Y9 231 aa6.26□□□□□ -1.41
CTNNA1-210ENST00000518825 MAPK1IP1LQ8NDC0 245 aa6.26□□□□□ -1.41
CTNNA1-210ENST00000518825 ZFYVE26Q68DK2 2539 aa6.26□□□□□ -1.41
CTNNA1-210ENST00000518825 LGALS9O00182 355 aa6.26□□□□□ -1.41
CTNNA1-210ENST00000518825 CD300EQ496F6 205 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-210ENST00000518825 GTSF1LQ9H1H1 148 aa6.26□□□□□ -1.41
CTNNA1-210ENST00000518825 PRO0461Q9UI25 63 aa6.26□□□□□ -1.41
CTNNA1-210ENST00000518825 TRBV27A0A0K0K1C4 114 aa6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 SDHAF1A6NFY7 115 aa6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 B4DSR2 109 aa6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 RBMY1A1P0DJD3 496 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 RBMY1CP0DJD4 496 aa6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 CRYBA4P53673 196 aa6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 RBMY1FQ15415 496 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 MTURNQ8N3F0 131 aa6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 ZNF479Q96JC4 524 aa6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 DUX5Q96PT3 197 aa6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 AMELXQ99217 191 aa6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 OPRPNQ99935 248 aaPredicted RBP6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 A0A1B0GV72 72 aa6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 K7EQG2 157 aa6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 M0QY20 66 aa6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 P0DMU3 169 aa6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 FAM231AP0DMU4 169 aa6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 FAM231CP0DMU5 169 aa6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 RRN3P1Q2M238 152 aa6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 UBR5O95071 2799 aaPredicted RBP6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 ZNF815PA8K554 130 aa6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 FAM74A4Q5TZK3 123 aa6.25□□□□□ -1.41
CTNNA1-210ENST00000518825 ID1P41134 155 aa6.24□□□□□ -1.41
CTNNA1-210ENST00000518825 SPINK13Q1W4C9 94 aa6.24□□□□□ -1.41
CTNNA1-210ENST00000518825 SPANXB1Q9NS25 103 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-210ENST00000518825 TRBV6-5A0A0K0K1A5 114 aa6.24□□□□□ -1.41
CTNNA1-210ENST00000518825 PPP1R17O96001 155 aa6.24□□□□□ -1.41
CTNNA1-210ENST00000518825 SYNJ2BPP57105 145 aa6.24□□□□□ -1.41
CTNNA1-210ENST00000518825 SH2D6Q7Z4S9 175 aa6.24□□□□□ -1.41
CTNNA1-210ENST00000518825 FAM104AQ969W3 186 aa6.24□□□□□ -1.41
CTNNA1-210ENST00000518825 NF1P21359 2839 aa6.24□□□□□ -1.41
CTNNA1-210ENST00000518825 LRRK2Q5S007 2527 aa6.24□□□□□ -1.41
CTNNA1-210ENST00000518825 VCYO14598 125 aa6.24□□□□□ -1.41
CTNNA1-210ENST00000518825 PRM2P04554 102 aa6.24□□□□□ -1.41
CTNNA1-210ENST00000518825 UBE2D1P51668 147 aa6.24□□□□□ -1.41
CTNNA1-210ENST00000518825 CREBBPQ92793 2442 aa6.23□□□□□ -1.41
CTNNA1-210ENST00000518825 A0A0J9YY99 117 aa6.23□□□□□ -1.41
CTNNA1-210ENST00000518825 F5H697 171 aa6.23□□□□□ -1.41
CTNNA1-210ENST00000518825 PMVKQ15126 192 aa6.23□□□□□ -1.41
CTNNA1-210ENST00000518825 ZNF876PQ49A33 203 aa6.23□□□□□ -1.41
CTNNA1-210ENST00000518825 C18orf65Q6ZTR6 163 aa6.23□□□□□ -1.41
CTNNA1-210ENST00000518825 ODF3Q96PU9 254 aa6.23□□□□□ -1.41
CTNNA1-210ENST00000518825 RPL24P83731 157 aaKnown RBP6.23□□□□□ -1.41
CTNNA1-210ENST00000518825 TIMM17AQ99595 171 aa6.23□□□□□ -1.41
CTNNA1-210ENST00000518825 Q9UF83 564 aa6.23□□□□□ -1.41
CTNNA1-210ENST00000518825 ZNF256Q9Y2P7 627 aaPredicted RBP6.23□□□□□ -1.41
CTNNA1-210ENST00000518825 ABCA12Q86UK0 2595 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms