RNA–Protein interactions for RNA: ENST00000518794.6

ARFGAP1-209, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 1 (best)

Gene ARFGAP1, Length 2,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-209ENST00000518794 FAM223BA6NKX1 122 aa13.66□□□□□ -0.22
ARFGAP1-209ENST00000518794 H3BUX3 64 aa13.66□□□□□ -0.22
ARFGAP1-209ENST00000518794 ASIPP42127 132 aa13.66□□□□□ -0.22
ARFGAP1-209ENST00000518794 FAM223AQ8IWN6 122 aa13.66□□□□□ -0.22
ARFGAP1-209ENST00000518794 CFAP46Q8IYW2 2715 aa13.65□□□□□ -0.22
ARFGAP1-209ENST00000518794 TRAV21A0A0B4J279 112 aa13.65□□□□□ -0.22
ARFGAP1-209ENST00000518794 LOC107984156A0A0G2JMH3 177 aa13.65□□□□□ -0.22
ARFGAP1-209ENST00000518794 GAGE12JA6NER3 117 aa13.65□□□□□ -0.22
ARFGAP1-209ENST00000518794 RNF223E7ERA6 249 aa13.65□□□□□ -0.22
ARFGAP1-209ENST00000518794 GAGE7O76087 117 aa13.65□□□□□ -0.22
ARFGAP1-209ENST00000518794 GAGE12FP0CL80 117 aa13.65□□□□□ -0.22
ARFGAP1-209ENST00000518794 GAGE12GP0CL81 117 aa13.65□□□□□ -0.22
ARFGAP1-209ENST00000518794 GAGE12IP0CL82 117 aa13.65□□□□□ -0.22
ARFGAP1-209ENST00000518794 GAGE4Q13068 117 aa13.65□□□□□ -0.22
ARFGAP1-209ENST00000518794 ARL17AQ8IVW1 177 aa13.65□□□□□ -0.22
ARFGAP1-209ENST00000518794 HOXA3O43365 443 aaPredicted RBP13.65□□□□□ -0.22
ARFGAP1-209ENST00000518794 TAL2Q16559 108 aa13.65□□□□□ -0.22
ARFGAP1-209ENST00000518794 TRBV7-3A0A075B6L6 115 aa13.64□□□□□ -0.23
ARFGAP1-209ENST00000518794 F8VRH5 84 aa13.64□□□□□ -0.23
ARFGAP1-209ENST00000518794 LINC00477Q96M19 166 aa13.64□□□□□ -0.23
ARFGAP1-209ENST00000518794 CITED1Q99966 193 aa13.64□□□□□ -0.23
ARFGAP1-209ENST00000518794 CREBBPQ92793 2442 aa13.64□□□□□ -0.23
ARFGAP1-209ENST00000518794 ZANQ9Y493 2812 aa13.64□□□□□ -0.23
ARFGAP1-209ENST00000518794 CUBNO60494 3623 aa13.64□□□□□ -0.23
ARFGAP1-209ENST00000518794 H7C1H1 209 aa13.64□□□□□ -0.23
ARFGAP1-209ENST00000518794 RNASE3P12724 160 aaKnown RBP13.64□□□□□ -0.23
ARFGAP1-209ENST00000518794 GNLYP22749 145 aa13.64□□□□□ -0.23
ARFGAP1-209ENST00000518794 C2orf66Q6UXQ4 117 aa13.64□□□□□ -0.23
ARFGAP1-209ENST00000518794 DPH3P1Q9H4G8 78 aa13.64□□□□□ -0.23
ARFGAP1-209ENST00000518794 RHPN1-AS1Q9BWJ2 59 aa13.63□□□□□ -0.23
ARFGAP1-209ENST00000518794 PLNP26678 52 aa13.63□□□□□ -0.23
ARFGAP1-209ENST00000518794 ID1P41134 155 aa13.63□□□□□ -0.23
ARFGAP1-209ENST00000518794 NDUFV3P56181 108 aaKnown RBP13.63□□□□□ -0.23
ARFGAP1-209ENST00000518794 NDUFA4O00483 81 aa13.63□□□□□ -0.23
ARFGAP1-209ENST00000518794 ZNF688P0C7X2 276 aa13.63□□□□□ -0.23
ARFGAP1-209ENST00000518794 TEN1Q86WV5 123 aa13.63□□□□□ -0.23
ARFGAP1-209ENST00000518794 TOMM6Q96B49 74 aa13.63□□□□□ -0.23
ARFGAP1-209ENST00000518794 BAALCQ8WXS3 180 aa13.62□□□□□ -0.23
ARFGAP1-209ENST00000518794 USP9YO00507 2555 aaPredicted RBP13.62□□□□□ -0.23
ARFGAP1-209ENST00000518794 A0A087WWL8 130 aa13.62□□□□□ -0.23
ARFGAP1-209ENST00000518794 LINC01549A6NIU2 74 aa13.62□□□□□ -0.23
ARFGAP1-209ENST00000518794 PSMG4Q5JS54 123 aa13.62□□□□□ -0.23
ARFGAP1-209ENST00000518794 NEXN-AS1Q8NBZ9 246 aa13.62□□□□□ -0.23
ARFGAP1-209ENST00000518794 OVOL1O14753 267 aa13.61□□□□□ -0.23
ARFGAP1-209ENST00000518794 DUSP14O95147 198 aaKnown RBP13.61□□□□□ -0.23
ARFGAP1-209ENST00000518794 IGKV3-20P01619 116 aa13.61□□□□□ -0.23
ARFGAP1-209ENST00000518794 CENPEQ02224 2701 aa13.61□□□□□ -0.23
ARFGAP1-209ENST00000518794 RHODO00212 210 aa13.61□□□□□ -0.23
ARFGAP1-209ENST00000518794 TGFAP01135 160 aa13.61□□□□□ -0.23
ARFGAP1-209ENST00000518794 ORMDL2Q53FV1 153 aa13.61□□□□□ -0.23
ARFGAP1-209ENST00000518794 POLQO75417 2590 aa13.6□□□□□ -0.23
ARFGAP1-209ENST00000518794 HLA-DRB4P13762 266 aa13.6□□□□□ -0.23
ARFGAP1-209ENST00000518794 HLA-DRB4X5D2U9 266 aa13.6□□□□□ -0.23
ARFGAP1-209ENST00000518794 PKD1L2Q7Z442 2459 aa13.6□□□□□ -0.23
ARFGAP1-209ENST00000518794 KLHL30-AS1Q8NEE0 82 aa13.6□□□□□ -0.23
ARFGAP1-209ENST00000518794 TRAV4A0A0B4J268 109 aa13.59□□□□□ -0.23
ARFGAP1-209ENST00000518794 MYMXA0A1B0GTQ4 84 aa13.59□□□□□ -0.23
ARFGAP1-209ENST00000518794 GAGE2BQ13066 116 aa13.59□□□□□ -0.23
ARFGAP1-209ENST00000518794 GAGE2EQ4V326 116 aa13.59□□□□□ -0.23
ARFGAP1-209ENST00000518794 C10orf99Q6UWK7 81 aa13.59□□□□□ -0.23
ARFGAP1-209ENST00000518794 PRADC1Q9BSG0 188 aa13.59□□□□□ -0.23
ARFGAP1-209ENST00000518794 GAGE2DQ9UEU5 116 aa13.59□□□□□ -0.23
ARFGAP1-209ENST00000518794 LENEPQ9Y5L5 61 aa13.59□□□□□ -0.23
ARFGAP1-209ENST00000518794 CRLF1O75462 422 aa13.59□□□□□ -0.23
ARFGAP1-209ENST00000518794 PLEKHB2Q96CS7 222 aa13.59□□□□□ -0.23
ARFGAP1-209ENST00000518794 RAX2Q96IS3 184 aa13.59□□□□□ -0.23
ARFGAP1-209ENST00000518794 RPL39P62891 51 aaKnown RBP13.58□□□□□ -0.24
ARFGAP1-209ENST00000518794 USP9XQ93008 2570 aaPredicted RBP13.58□□□□□ -0.24
ARFGAP1-209ENST00000518794 TRAV12-1A0A0B4J245 112 aa13.58□□□□□ -0.24
ARFGAP1-209ENST00000518794 TRAV12-3A0A0B4J271 114 aa13.58□□□□□ -0.24
ARFGAP1-209ENST00000518794 LGALS1P09382 135 aaKnown RBP13.58□□□□□ -0.24
ARFGAP1-209ENST00000518794 FAM19A4Q96LR4 140 aa13.58□□□□□ -0.24
ARFGAP1-209ENST00000518794 FAM159AQ6UWV7 190 aa13.57□□□□□ -0.24
ARFGAP1-209ENST00000518794 ANKRD29Q8N6D5 301 aa13.57□□□□□ -0.24
ARFGAP1-209ENST00000518794 F5H697 171 aa13.57□□□□□ -0.24
ARFGAP1-209ENST00000518794 IGHG2P01859 326 aa13.57□□□□□ -0.24
ARFGAP1-209ENST00000518794 TRAV12-2A0A075B6T6 113 aa13.56□□□□□ -0.24
ARFGAP1-209ENST00000518794 IGHV4-30-2A0A087WSY4 118 aa13.56□□□□□ -0.24
ARFGAP1-209ENST00000518794 SLC25A16P16260 332 aa13.56□□□□□ -0.24
ARFGAP1-209ENST00000518794 TTC32Q5I0X7 151 aa13.56□□□□□ -0.24
ARFGAP1-209ENST00000518794 FAM74A4Q5TZK3 123 aa13.56□□□□□ -0.24
ARFGAP1-209ENST00000518794 CITED2Q99967 270 aaPredicted RBP13.56□□□□□ -0.24
ARFGAP1-209ENST00000518794 AVPP01185 164 aa13.56□□□□□ -0.24
ARFGAP1-209ENST00000518794 TSHBP01222 138 aa13.56□□□□□ -0.24
ARFGAP1-209ENST00000518794 CRIP2P52943 208 aaPredicted RBP13.56□□□□□ -0.24
ARFGAP1-209ENST00000518794 ZNF815PA8K554 130 aa13.55□□□□□ -0.24
ARFGAP1-209ENST00000518794 CRYGDP07320 174 aa13.55□□□□□ -0.24
ARFGAP1-209ENST00000518794 LINC00315P59091 139 aa13.55□□□□□ -0.24
ARFGAP1-209ENST00000518794 YAE1D1Q9NRH1 226 aa13.55□□□□□ -0.24
ARFGAP1-209ENST00000518794 TP53TG1Q9Y2A0 90 aa13.55□□□□□ -0.24
ARFGAP1-209ENST00000518794 TCL1BO95988 128 aa13.55□□□□□ -0.24
ARFGAP1-209ENST00000518794 CD7P09564 240 aa13.55□□□□□ -0.24
ARFGAP1-209ENST00000518794 VCX2Q9H322 139 aa13.55□□□□□ -0.24
ARFGAP1-209ENST00000518794 PPDPFQ9H3Y8 114 aa13.55□□□□□ -0.24
ARFGAP1-209ENST00000518794 A6NDX4 124 aa13.55□□□□□ -0.24
ARFGAP1-209ENST00000518794 A8MWV9 139 aa13.55□□□□□ -0.24
ARFGAP1-209ENST00000518794 IFITM1P13164 125 aa13.55□□□□□ -0.24
ARFGAP1-209ENST00000518794 C3orf56Q8N813 242 aa13.55□□□□□ -0.24
ARFGAP1-209ENST00000518794 PIMREGQ9BSJ6 248 aa13.55□□□□□ -0.24
ARFGAP1-209ENST00000518794 SNCGO76070 127 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms