RNA–Protein interactions for RNA: ENST00000516881.1

SCARNA15-202, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-202ENST00000516881 ATP6V1G3Q96LB4 118 aa-1.84□□□□□ -2.7
SCARNA15-202ENST00000516881 SDF2Q99470 211 aa-1.84□□□□□ -2.7
SCARNA15-202ENST00000516881 LXNQ9BS40 222 aa-1.84□□□□□ -2.7
SCARNA15-202ENST00000516881 C9orf16Q9BUW7 83 aa-1.84□□□□□ -2.7
SCARNA15-202ENST00000516881 SSR3Q9UNL2 185 aa-1.84□□□□□ -2.7
SCARNA15-202ENST00000516881 ZMYM4Q5VZL5 1548 aa-1.85□□□□□ -2.71
SCARNA15-202ENST00000516881 ZNF142P52746 1687 aaPredicted RBP-1.85□□□□□ -2.71
SCARNA15-202ENST00000516881 TCOF1Q13428 1488 aaKnown RBP-1.85□□□□□ -2.71
SCARNA15-202ENST00000516881 SMIM23A6NLE4 172 aa-1.85□□□□□ -2.71
SCARNA15-202ENST00000516881 AKR1D1P51857 326 aa-1.85□□□□□ -2.71
SCARNA15-202ENST00000516881 ARF6P62330 175 aa-1.85□□□□□ -2.71
SCARNA15-202ENST00000516881 SPA17Q15506 151 aa-1.85□□□□□ -2.71
SCARNA15-202ENST00000516881 CFAP126Q5VTH2 177 aa-1.85□□□□□ -2.71
SCARNA15-202ENST00000516881 DEFB105AQ8NG35 78 aa-1.85□□□□□ -2.71
SCARNA15-202ENST00000516881 ATP6V1DQ9Y5K8 247 aa-1.85□□□□□ -2.71
SCARNA15-202ENST00000516881 WNK3Q9BYP7 1800 aa-1.85□□□□□ -2.71
SCARNA15-202ENST00000516881 LRP6O75581 1613 aa-1.85□□□□□ -2.71
SCARNA15-202ENST00000516881 TRAPPC8Q9Y2L5 1435 aa-1.85□□□□□ -2.71
SCARNA15-202ENST00000516881 DNAH2Q9P225 4427 aa-1.85□□□□□ -2.71
SCARNA15-202ENST00000516881 RNF213Q63HN8 5207 aa-1.85□□□□□ -2.71
SCARNA15-202ENST00000516881 SPG11Q96JI7 2443 aa-1.86□□□□□ -2.71
SCARNA15-202ENST00000516881 NIPBLQ6KC79 2804 aaeCLIP-1.86□□□□□ -2.71
SCARNA15-202ENST00000516881 TPM3P06753 285 aa-1.86□□□□□ -2.71
SCARNA15-202ENST00000516881 SDC2P34741 201 aa-1.86□□□□□ -2.71
SCARNA15-202ENST00000516881 LSM3P62310 102 aaKnown RBP-1.86□□□□□ -2.71
SCARNA15-202ENST00000516881 PRNDQ9UKY0 176 aa-1.86□□□□□ -2.71
SCARNA15-202ENST00000516881 NUBP2Q9Y5Y2 271 aa-1.86□□□□□ -2.71
SCARNA15-202ENST00000516881 DNAJC13O75165 2243 aa-1.86□□□□□ -2.71
SCARNA15-202ENST00000516881 PHIPQ8WWQ0 1821 aa-1.87□□□□□ -2.71
SCARNA15-202ENST00000516881 FAM92AA1XBS5 289 aa-1.87□□□□□ -2.71
SCARNA15-202ENST00000516881 SMIM6P0DI80 62 aa-1.87□□□□□ -2.71
SCARNA15-202ENST00000516881 SLC25A6P12236 298 aa-1.87□□□□□ -2.71
SCARNA15-202ENST00000516881 EDDM3BP56851 147 aa-1.87□□□□□ -2.71
SCARNA15-202ENST00000516881 RPL19P84098 196 aaKnown RBP-1.87□□□□□ -2.71
SCARNA15-202ENST00000516881 AKR1C8PQ5T2L2 129 aa-1.87□□□□□ -2.71
SCARNA15-202ENST00000516881 ANKRD31Q8N7Z5 1873 aa-1.87□□□□□ -2.71
SCARNA15-202ENST00000516881 WFDC6Q9BQY6 131 aa-1.87□□□□□ -2.71
SCARNA15-202ENST00000516881 LRTM1Q9HBL6 345 aa-1.87□□□□□ -2.71
SCARNA15-202ENST00000516881 LAMTOR3Q9UHA4 124 aa-1.87□□□□□ -2.71
SCARNA15-202ENST00000516881 PAPPAQ13219 1627 aa-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 IFT172Q9UG01 1749 aa-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 ZFYVE9O95405 1425 aa-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 FAM135BQ49AJ0 1406 aa-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 KIF13AQ9H1H9 1805 aa-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 TRBV27A0A0K0K1C4 114 aa-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 PPP5D1E7EU14 171 aa-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 J3KT08 172 aa-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 CYBAP13498 195 aa-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 PCBD1P61457 104 aa-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 LSM6P62312 80 aaKnown RBP-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 BASP1P80723 227 aaKnown RBP-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 SLC25A26Q70HW3 274 aa-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 LINC00305Q7Z4B0 112 aa-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 NDUFA11Q86Y39 141 aa-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 CARD19Q96LW7 228 aa-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 TAS2R8Q9NYW2 309 aa-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 MED11Q9P086 117 aa-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 AKAP9Q99996 3911 aa-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 KDM3BQ7LBC6 1761 aa-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 NRXN2Q9P2S2 1712 aa-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 PRRC2CQ9Y520 2896 aaKnown RBP-1.88□□□□□ -2.71
SCARNA15-202ENST00000516881 TRAV13-1A0A0B4J241 112 aa-1.89□□□□□ -2.71
SCARNA15-202ENST00000516881 GABARAPH6UMI1 98 aa-1.89□□□□□ -2.71
SCARNA15-202ENST00000516881 S100A6P06703 90 aa-1.89□□□□□ -2.71
SCARNA15-202ENST00000516881 CRYGSP22914 178 aa-1.89□□□□□ -2.71
SCARNA15-202ENST00000516881 CRYBA4P53673 196 aa-1.89□□□□□ -2.71
SCARNA15-202ENST00000516881 ERVS71-1P61550 626 aa-1.89□□□□□ -2.71
SCARNA15-202ENST00000516881 TPM4P67936 248 aa-1.89□□□□□ -2.71
SCARNA15-202ENST00000516881 SPCS2Q15005 226 aa-1.89□□□□□ -2.71
SCARNA15-202ENST00000516881 NUP35Q8NFH5 326 aa-1.89□□□□□ -2.71
SCARNA15-202ENST00000516881 LINC00472Q9H8W2 130 aa-1.89□□□□□ -2.71
SCARNA15-202ENST00000516881 LYRM2Q9NU23 88 aaPredicted RBP-1.89□□□□□ -2.71
SCARNA15-202ENST00000516881 NDUFAF1Q9Y375 327 aa-1.89□□□□□ -2.71
SCARNA15-202ENST00000516881 MYH1P12882 1939 aa-1.89□□□□□ -2.71
SCARNA15-202ENST00000516881 TEP1Q99973 2627 aaKnown RBP-1.89□□□□□ -2.71
SCARNA15-202ENST00000516881 TRAV12-3A0A0B4J271 114 aa-1.9□□□□□ -2.71
SCARNA15-202ENST00000516881 PNMA8CA0A1B0GUJ8 204 aa-1.9□□□□□ -2.71
SCARNA15-202ENST00000516881 CSN2P05814 226 aa-1.9□□□□□ -2.71
SCARNA15-202ENST00000516881 CEBPGP53567 150 aa-1.9□□□□□ -2.71
SCARNA15-202ENST00000516881 TMED2Q15363 201 aa-1.9□□□□□ -2.71
SCARNA15-202ENST00000516881 Q5VV11 94 aa-1.9□□□□□ -2.71
SCARNA15-202ENST00000516881 ERG28Q9UKR5 140 aa-1.9□□□□□ -2.71
SCARNA15-202ENST00000516881 ADGBQ8N7X0 1667 aa-1.9□□□□□ -2.71
SCARNA15-202ENST00000516881 CCDC171Q6TFL3 1326 aa-1.91□□□□□ -2.71
SCARNA15-202ENST00000516881 ARFGEF1Q9Y6D6 1849 aa-1.91□□□□□ -2.71
SCARNA15-202ENST00000516881 H3BMG7 143 aa-1.91□□□□□ -2.72
SCARNA15-202ENST00000516881 HBDP02042 147 aa-1.91□□□□□ -2.72
SCARNA15-202ENST00000516881 SRP9P49458 86 aaKnown RBP-1.91□□□□□ -2.72
SCARNA15-202ENST00000516881 LTC4SQ16873 150 aa-1.91□□□□□ -2.72
SCARNA15-202ENST00000516881 BAGE3Q86Y29 109 aa-1.91□□□□□ -2.72
SCARNA15-202ENST00000516881 SS18L2Q9UHA2 77 aa-1.91□□□□□ -2.72
SCARNA15-202ENST00000516881 TRDV1A0A1B0GX56 115 aa-1.92□□□□□ -2.72
SCARNA15-202ENST00000516881 PGRMC1O00264 195 aaKnown RBP-1.92□□□□□ -2.72
SCARNA15-202ENST00000516881 CNPY4Q8N129 248 aa-1.92□□□□□ -2.72
SCARNA15-202ENST00000516881 PHB2Q99623 299 aa-1.92□□□□□ -2.72
SCARNA15-202ENST00000516881 LLPHQ9BRT6 129 aaKnown RBP-1.92□□□□□ -2.72
SCARNA15-202ENST00000516881 SH3BGRL3Q9H299 93 aa-1.92□□□□□ -2.72
SCARNA15-202ENST00000516881 ARMC1Q9NVT9 282 aa-1.92□□□□□ -2.72
SCARNA15-202ENST00000516881 WDR97A6NE52 1622 aa-1.92□□□□□ -2.72
SCARNA15-202ENST00000516881 TECPR2O15040 1411 aa-1.92□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms