RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 IBTKQ9P2D0 1353 aaPredicted RBP-3.79□□□□□ -3.02
RNU6-542P-201ENST00000516405 CDC42BPAQ5VT25 1732 aa-3.8□□□□□ -3.02
RNU6-542P-201ENST00000516405 TRBV7-4A0A0J9YYF1 115 aa-3.8□□□□□ -3.02
RNU6-542P-201ENST00000516405 LINC00959A0A1B0GUT2 108 aa-3.8□□□□□ -3.02
RNU6-542P-201ENST00000516405 F8VRH5 84 aa-3.8□□□□□ -3.02
RNU6-542P-201ENST00000516405 ADCYAP1P18509 176 aa-3.8□□□□□ -3.02
RNU6-542P-201ENST00000516405 HADHBP55084 474 aaKnown RBP-3.8□□□□□ -3.02
RNU6-542P-201ENST00000516405 VAMP3Q15836 100 aa-3.8□□□□□ -3.02
RNU6-542P-201ENST00000516405 HIST3H3Q16695 136 aa-3.8□□□□□ -3.02
RNU6-542P-201ENST00000516405 Q3ZCU0 254 aa-3.8□□□□□ -3.02
RNU6-542P-201ENST00000516405 ATP6V1C2Q8NEY4 427 aa-3.8□□□□□ -3.02
RNU6-542P-201ENST00000516405 NT5C3AQ9H0P0 336 aa-3.8□□□□□ -3.02
RNU6-542P-201ENST00000516405 hADV38S2A0JD32 116 aa-3.81□□□□□ -3.02
RNU6-542P-201ENST00000516405 CASQ2O14958 399 aaPredicted RBP-3.81□□□□□ -3.02
RNU6-542P-201ENST00000516405 BIRC5O15392 142 aa-3.81□□□□□ -3.02
RNU6-542P-201ENST00000516405 CST8O60676 142 aa-3.81□□□□□ -3.02
RNU6-542P-201ENST00000516405 HIST1H2BKO60814 126 aa-3.81□□□□□ -3.02
RNU6-542P-201ENST00000516405 IFNA21P01568 189 aa-3.81□□□□□ -3.02
RNU6-542P-201ENST00000516405 IFNA5P01569 189 aa-3.81□□□□□ -3.02
RNU6-542P-201ENST00000516405 HIST1H2BJP06899 126 aa-3.81□□□□□ -3.02
RNU6-542P-201ENST00000516405 RPL12P30050 165 aaKnown RBP-3.81□□□□□ -3.02
RNU6-542P-201ENST00000516405 FKBP1CQ5VVH2 108 aa-3.81□□□□□ -3.02
RNU6-542P-201ENST00000516405 RTL9Q8NET4 1388 aa-3.81□□□□□ -3.02
RNU6-542P-201ENST00000516405 FAM236DA0A1B0GTK5 79 aa-3.82□□□□□ -3.02
RNU6-542P-201ENST00000516405 FAM92AA1XBS5 289 aa-3.82□□□□□ -3.02
RNU6-542P-201ENST00000516405 CLPSL1A2RUU4 121 aa-3.82□□□□□ -3.02
RNU6-542P-201ENST00000516405 FAM236CP0DP71 79 aa-3.82□□□□□ -3.02
RNU6-542P-201ENST00000516405 MRPS36P82909 103 aaKnown RBP-3.82□□□□□ -3.02
RNU6-542P-201ENST00000516405 MSMO1Q15800 293 aa-3.82□□□□□ -3.02
RNU6-542P-201ENST00000516405 CD302Q8IX05 232 aa-3.82□□□□□ -3.02
RNU6-542P-201ENST00000516405 RAB8BQ92930 207 aa-3.82□□□□□ -3.02
RNU6-542P-201ENST00000516405 SLC35B4Q969S0 331 aa-3.82□□□□□ -3.02
RNU6-542P-201ENST00000516405 SMIM19Q96E16 107 aa-3.82□□□□□ -3.02
RNU6-542P-201ENST00000516405 PRELID3AQ96N28 172 aa-3.82□□□□□ -3.02
RNU6-542P-201ENST00000516405 GPX7Q96SL4 187 aaPredicted RBP-3.82□□□□□ -3.02
RNU6-542P-201ENST00000516405 CRIPTQ9P021 101 aa-3.82□□□□□ -3.02
RNU6-542P-201ENST00000516405 DOCK2Q92608 1830 aa-3.82□□□□□ -3.02
RNU6-542P-201ENST00000516405 CFAP54Q96N23 3096 aa-3.82□□□□□ -3.02
RNU6-542P-201ENST00000516405 ALKQ9UM73 1620 aa-3.83□□□□□ -3.02
RNU6-542P-201ENST00000516405 NKTRP30414 1462 aaKnown RBP-3.83□□□□□ -3.02
RNU6-542P-201ENST00000516405 CALUO43852 315 aaPredicted RBP-3.83□□□□□ -3.02
RNU6-542P-201ENST00000516405 UBE2G2P60604 165 aa-3.83□□□□□ -3.02
RNU6-542P-201ENST00000516405 WFDC13Q8IUB5 93 aa-3.83□□□□□ -3.02
RNU6-542P-201ENST00000516405 OR6V1Q8N148 313 aa-3.83□□□□□ -3.02
RNU6-542P-201ENST00000516405 PPDPFLQ8WWR9 84 aa-3.83□□□□□ -3.02
RNU6-542P-201ENST00000516405 SMIM7Q9BQ49 75 aa-3.83□□□□□ -3.02
RNU6-542P-201ENST00000516405 VPS25Q9BRG1 176 aa-3.83□□□□□ -3.02
RNU6-542P-201ENST00000516405 DRC3Q9H069 523 aa-3.83□□□□□ -3.02
RNU6-542P-201ENST00000516405 FKBP11Q9NYL4 201 aa-3.83□□□□□ -3.02
RNU6-542P-201ENST00000516405 TRAV4A0A0B4J268 109 aa-3.84□□□□□ -3.02
RNU6-542P-201ENST00000516405 MT-ND6P03923 174 aa-3.84□□□□□ -3.02
RNU6-542P-201ENST00000516405 C8GP07360 202 aa-3.84□□□□□ -3.02
RNU6-542P-201ENST00000516405 SERPINA6P08185 405 aa-3.84□□□□□ -3.02
RNU6-542P-201ENST00000516405 SLAMF1Q13291 335 aa-3.84□□□□□ -3.02
RNU6-542P-201ENST00000516405 C9orf116Q5BN46 136 aaPredicted RBP-3.84□□□□□ -3.02
RNU6-542P-201ENST00000516405 CLVS2Q5SYC1 327 aa-3.84□□□□□ -3.02
RNU6-542P-201ENST00000516405 CLPSL2Q6UWE3 100 aa-3.84□□□□□ -3.02
RNU6-542P-201ENST00000516405 TRAPPC5Q8IUR0 188 aa-3.84□□□□□ -3.02
RNU6-542P-201ENST00000516405 LRRC20Q8TCA0 184 aa-3.84□□□□□ -3.02
RNU6-542P-201ENST00000516405 BRK1Q8WUW1 75 aa-3.84□□□□□ -3.02
RNU6-542P-201ENST00000516405 CMSS1Q9BQ75 279 aaKnown RBP-3.84□□□□□ -3.02
RNU6-542P-201ENST00000516405 KIF21AQ7Z4S6 1674 aa-3.84□□□□□ -3.02
RNU6-542P-201ENST00000516405 SETBP1Q9Y6X0 1596 aa-3.85□□□□□ -3.02
RNU6-542P-201ENST00000516405 MYH6P13533 1939 aa-3.85□□□□□ -3.03
RNU6-542P-201ENST00000516405 BTAF1O14981 1849 aa-3.85□□□□□ -3.03
RNU6-542P-201ENST00000516405 A0A087WUJ7 227 aa-3.85□□□□□ -3.03
RNU6-542P-201ENST00000516405 SMIM6P0DI80 62 aa-3.85□□□□□ -3.03
RNU6-542P-201ENST00000516405 INSL3P51460 131 aa-3.85□□□□□ -3.03
RNU6-542P-201ENST00000516405 PSME3P61289 254 aa-3.85□□□□□ -3.03
RNU6-542P-201ENST00000516405 NDUFA11Q86Y39 141 aa-3.85□□□□□ -3.03
RNU6-542P-201ENST00000516405 TRAPPC8Q9Y2L5 1435 aa-3.86□□□□□ -3.03
RNU6-542P-201ENST00000516405 C5orf58C9J3I9 102 aa-3.86□□□□□ -3.03
RNU6-542P-201ENST00000516405 SLC25A6P12236 298 aa-3.86□□□□□ -3.03
RNU6-542P-201ENST00000516405 PIPP12273 146 aaPredicted RBP-3.86□□□□□ -3.03
RNU6-542P-201ENST00000516405 MYL12AP19105 171 aa-3.86□□□□□ -3.03
RNU6-542P-201ENST00000516405 SYT1P21579 422 aa-3.86□□□□□ -3.03
RNU6-542P-201ENST00000516405 NFYBP25208 207 aa-3.86□□□□□ -3.03
RNU6-542P-201ENST00000516405 ERP29P30040 261 aaKnown RBP-3.86□□□□□ -3.03
RNU6-542P-201ENST00000516405 SPCS2Q15005 226 aa-3.86□□□□□ -3.03
RNU6-542P-201ENST00000516405 SMIM4Q8WVI0 70 aa-3.86□□□□□ -3.03
RNU6-542P-201ENST00000516405 C1orf109Q9NX04 203 aa-3.86□□□□□ -3.03
RNU6-542P-201ENST00000516405 NDUFAF1Q9Y375 327 aa-3.86□□□□□ -3.03
RNU6-542P-201ENST00000516405 LRRC37A3O60309 1634 aa-3.86□□□□□ -3.03
RNU6-542P-201ENST00000516405 TRAV12-3A0A0B4J271 114 aa-3.87□□□□□ -3.03
RNU6-542P-201ENST00000516405 RAB19A4D1S5 217 aa-3.87□□□□□ -3.03
RNU6-542P-201ENST00000516405 GOLGA8KD6RF30 607 aa-3.87□□□□□ -3.03
RNU6-542P-201ENST00000516405 MYL6P60660 151 aa-3.87□□□□□ -3.03
RNU6-542P-201ENST00000516405 VSTM2AQ8TAG5 236 aa-3.87□□□□□ -3.03
RNU6-542P-201ENST00000516405 GLTPQ9NZD2 209 aa-3.87□□□□□ -3.03
RNU6-542P-201ENST00000516405 LAMTOR3Q9UHA4 124 aa-3.87□□□□□ -3.03
RNU6-542P-201ENST00000516405 C8orf88P0DMB2 117 aa-3.88□□□□□ -3.03
RNU6-542P-201ENST00000516405 ANXA8P13928 327 aa-3.88□□□□□ -3.03
RNU6-542P-201ENST00000516405 FGF7P21781 194 aa-3.88□□□□□ -3.03
RNU6-542P-201ENST00000516405 CCL18P55774 89 aa-3.88□□□□□ -3.03
RNU6-542P-201ENST00000516405 RPS28P62857 69 aaKnown RBP-3.88□□□□□ -3.03
RNU6-542P-201ENST00000516405 HBBP68871 147 aa-3.88□□□□□ -3.03
RNU6-542P-201ENST00000516405 STK38Q15208 465 aa-3.88□□□□□ -3.03
RNU6-542P-201ENST00000516405 ANXA8L1Q5VT79 327 aa-3.88□□□□□ -3.03
RNU6-542P-201ENST00000516405 CDC42SE2Q9NRR3 84 aa-3.88□□□□□ -3.03
RNU6-542P-201ENST00000516405 NDUFA12Q9UI09 145 aa-3.88□□□□□ -3.03
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms