RNA–Protein interactions for RNA: ENST00000515697.5

FAM200B-222, Transcript of family with sequence similarity 200 member B, human

TSL 3

Gene FAM200B, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM200B-222	ENST00000515697		A0A1B0GV50	99 aa		13.52	□□□□□ -0.25
FAM200B-222	ENST00000515697	S100A9	P06702	114 aa	Known RBP	13.52	□□□□□ -0.25
FAM200B-222	ENST00000515697		Q8N3U1	123 aa		13.52	□□□□□ -0.25
FAM200B-222	ENST00000515697	TMSB15B	A0A087X1C1	80 aa		13.51	□□□□□ -0.25
FAM200B-222	ENST00000515697	IGHV3-30	P01768	117 aa		13.51	□□□□□ -0.25
FAM200B-222	ENST00000515697	IGHV3-33	P01772	117 aa		13.51	□□□□□ -0.25
FAM200B-222	ENST00000515697	IGHV3-30-3	P0DP02	117 aa		13.51	□□□□□ -0.25
FAM200B-222	ENST00000515697	IGHV3-30-5	P0DP03	117 aa		13.51	□□□□□ -0.25
FAM200B-222	ENST00000515697	KRTAP10-1	P60331	282 aa		13.51	□□□□□ -0.25
FAM200B-222	ENST00000515697	PHLDA3	Q9Y5J5	127 aa		13.51	□□□□□ -0.25
FAM200B-222	ENST00000515697	VPS13B	Q7Z7G8	4022 aa		13.51	□□□□□ -0.25
FAM200B-222	ENST00000515697	H2AFB1	P0C5Y9	115 aa		13.5	□□□□□ -0.25
FAM200B-222	ENST00000515697	TPT1	P13693	172 aa	Known RBP	13.5	□□□□□ -0.25
FAM200B-222	ENST00000515697	EIF5A	P63241	154 aa	Known RBP	13.5	□□□□□ -0.25
FAM200B-222	ENST00000515697	LAGE3	Q14657	143 aa		13.5	□□□□□ -0.25
FAM200B-222	ENST00000515697	CXCL1	P09341	107 aa		13.49	□□□□□ -0.25
FAM200B-222	ENST00000515697	XG	P55808	180 aa		13.49	□□□□□ -0.25
FAM200B-222	ENST00000515697	ZFP82	Q8N141	532 aa		13.49	□□□□□ -0.25
FAM200B-222	ENST00000515697		A0A087WWL8	130 aa		13.48	□□□□□ -0.25
FAM200B-222	ENST00000515697	TRAV1-1	A0A0B4J248	108 aa		13.48	□□□□□ -0.25
FAM200B-222	ENST00000515697		M0R381	172 aa		13.48	□□□□□ -0.25
FAM200B-222	ENST00000515697	CCL20	P78556	96 aa		13.48	□□□□□ -0.25
FAM200B-222	ENST00000515697	RPL19	P84098	196 aa	Known RBP	13.48	□□□□□ -0.25
FAM200B-222	ENST00000515697	FAM74A4	Q5TZK3	123 aa		13.48	□□□□□ -0.25
FAM200B-222	ENST00000515697	PFDN1	O60925	122 aa		13.47	□□□□□ -0.25
FAM200B-222	ENST00000515697	BAGE2	Q86Y30	109 aa		13.47	□□□□□ -0.25
FAM200B-222	ENST00000515697		Q9HAA7	133 aa		13.47	□□□□□ -0.25
FAM200B-222	ENST00000515697		A0A087WWC5	75 aa		13.46	□□□□□ -0.25
FAM200B-222	ENST00000515697	C11orf52	Q96A22	123 aa		13.46	□□□□□ -0.25
FAM200B-222	ENST00000515697	SSBP4	Q9BWG4	385 aa	Predicted RBP	13.46	□□□□□ -0.25
FAM200B-222	ENST00000515697	TRBV10-1	A0A0K0K1A3	114 aa		13.45	□□□□□ -0.26
FAM200B-222	ENST00000515697	SNAI2	O43623	268 aa		13.45	□□□□□ -0.26
FAM200B-222	ENST00000515697	PSCA	O43653	123 aa		13.45	□□□□□ -0.26
FAM200B-222	ENST00000515697	OR10AG1	Q8NH19	301 aa		13.45	□□□□□ -0.26
FAM200B-222	ENST00000515697	RPL35	P42766	123 aa	Known RBP	13.44	□□□□□ -0.26
FAM200B-222	ENST00000515697	TCTE3	Q8IZS6	198 aa		13.44	□□□□□ -0.26
FAM200B-222	ENST00000515697	NTN5	Q8WTR8	489 aa	Predicted RBP	13.44	□□□□□ -0.26
FAM200B-222	ENST00000515697	DERL1	Q9BUN8	251 aa		13.44	□□□□□ -0.26
FAM200B-222	ENST00000515697	MANBAL	Q9NQG1	85 aa		13.44	□□□□□ -0.26
FAM200B-222	ENST00000515697	OR5AL1	P0C617	328 aa		13.43	□□□□□ -0.26
FAM200B-222	ENST00000515697	GCSH	P23434	173 aa		13.43	□□□□□ -0.26
FAM200B-222	ENST00000515697	RAB5C	P51148	216 aa		13.43	□□□□□ -0.26
FAM200B-222	ENST00000515697	UBE2D3	P61077	147 aa		13.43	□□□□□ -0.26
FAM200B-222	ENST00000515697	UBE2D2	P62837	147 aa		13.43	□□□□□ -0.26
FAM200B-222	ENST00000515697	DAZ4	Q86SG3	579 aa	Known RBP	13.43	□□□□□ -0.26
FAM200B-222	ENST00000515697		Q8N814	137 aa		13.43	□□□□□ -0.26
FAM200B-222	ENST00000515697	OR10G8	Q8NGN5	311 aa		13.43	□□□□□ -0.26
FAM200B-222	ENST00000515697	DAZ3	Q9NR90	486 aa	Known RBP	13.43	□□□□□ -0.26
FAM200B-222	ENST00000515697	PRR27	Q6MZM9	219 aa		13.42	□□□□□ -0.26
FAM200B-222	ENST00000515697	NIT1	Q86X76	327 aa		13.42	□□□□□ -0.26
FAM200B-222	ENST00000515697	GNG13	Q9P2W3	67 aa		13.42	□□□□□ -0.26
FAM200B-222	ENST00000515697	IGLV2-8	P01709	118 aa		13.41	□□□□□ -0.26
FAM200B-222	ENST00000515697	SULT1A2	P50226	295 aa		13.41	□□□□□ -0.26
FAM200B-222	ENST00000515697	WFDC2	Q14508	124 aa		13.41	□□□□□ -0.26
FAM200B-222	ENST00000515697	TM2D2	Q9BX73	214 aa		13.41	□□□□□ -0.26
FAM200B-222	ENST00000515697	TRBV7-3	A0A075B6L6	115 aa		13.4	□□□□□ -0.26
FAM200B-222	ENST00000515697	IGLV5-52	A0A0A0MRZ9	124 aa		13.4	□□□□□ -0.26
FAM200B-222	ENST00000515697	TRAV8-3	A0A0A6YYJ7	113 aa		13.4	□□□□□ -0.26
FAM200B-222	ENST00000515697	RAB4B	P61018	213 aa		13.4	□□□□□ -0.26
FAM200B-222	ENST00000515697	RPL36A	P83881	106 aa	Known RBP	13.39	□□□□□ -0.27
FAM200B-222	ENST00000515697	EIF5AL1	Q6IS14	154 aa	Known RBP	13.39	□□□□□ -0.27
FAM200B-222	ENST00000515697	NEXN-AS1	Q8NBZ9	246 aa		13.39	□□□□□ -0.27
FAM200B-222	ENST00000515697	RPL36AL	Q969Q0	106 aa	Known RBP	13.39	□□□□□ -0.27
FAM200B-222	ENST00000515697	SRRM2	Q9UQ35	2752 aa	Known RBP	13.38	□□□□□ -0.27
FAM200B-222	ENST00000515697	CENPW	Q5EE01	88 aa		13.38	□□□□□ -0.27
FAM200B-222	ENST00000515697	TOR2A	Q5JU69	321 aa		13.38	□□□□□ -0.27
FAM200B-222	ENST00000515697	KIF25-AS1	Q9Y6Z4	181 aa		13.38	□□□□□ -0.27
FAM200B-222	ENST00000515697	MUC21	A0A0G2JKD1	596 aa		13.37	□□□□□ -0.27
FAM200B-222	ENST00000515697	MUC21	A0A140T8X8	626 aa		13.37	□□□□□ -0.27
FAM200B-222	ENST00000515697	DNAJC30	Q96LL9	226 aa		13.37	□□□□□ -0.27
FAM200B-222	ENST00000515697	CHCHD7	Q9BUK0	85 aa		13.37	□□□□□ -0.27
FAM200B-222	ENST00000515697	C19orf71	A6NCJ1	209 aa		13.36	□□□□□ -0.27
FAM200B-222	ENST00000515697	EPM2A	B3EWF7	344 aa		13.36	□□□□□ -0.27
FAM200B-222	ENST00000515697	C1QB	P02746	253 aa		13.36	□□□□□ -0.27
FAM200B-222	ENST00000515697	MEF2B	Q02080	365 aa	Predicted RBP	13.36	□□□□□ -0.27
FAM200B-222	ENST00000515697		Q6ZNX1	250 aa		13.36	□□□□□ -0.27
FAM200B-222	ENST00000515697	TMEM70	Q9BUB7	260 aa		13.36	□□□□□ -0.27
FAM200B-222	ENST00000515697	TRBV20OR9-2	A0A075B6H5	130 aa		13.35	□□□□□ -0.27
FAM200B-222	ENST00000515697	IGLC6	P0CF74	106 aa		13.35	□□□□□ -0.27
FAM200B-222	ENST00000515697	ZNF56	Q15929	161 aa		13.35	□□□□□ -0.27
FAM200B-222	ENST00000515697	SPANXN1	Q5VSR9	72 aa		13.35	□□□□□ -0.27
FAM200B-222	ENST00000515697	SLC51B	Q86UW2	128 aa		13.35	□□□□□ -0.27
FAM200B-222	ENST00000515697	SMIM12	Q96EX1	92 aa		13.35	□□□□□ -0.27
FAM200B-222	ENST00000515697	RAB19	A4D1S5	217 aa		13.34	□□□□□ -0.27
FAM200B-222	ENST00000515697	TRBV6-8	A0A0A6YYG3	113 aa		13.33	□□□□□ -0.28
FAM200B-222	ENST00000515697	TEX46	H3BTG2	121 aa		13.33	□□□□□ -0.28
FAM200B-222	ENST00000515697	PDE6D	O43924	150 aa		13.33	□□□□□ -0.28
FAM200B-222	ENST00000515697	GZMB	P10144	247 aa		13.33	□□□□□ -0.28
FAM200B-222	ENST00000515697	BCL2	P10415	239 aa		13.33	□□□□□ -0.28
FAM200B-222	ENST00000515697	ATRAID	Q6UW56	229 aa		13.33	□□□□□ -0.28
FAM200B-222	ENST00000515697	KLK12	Q9UKR0	248 aa		13.33	□□□□□ -0.28
FAM200B-222	ENST00000515697	COX11	Q9Y6N1	276 aa		13.33	□□□□□ -0.28
FAM200B-222	ENST00000515697	URGCP-MRPS24	S4R325	110 aa		13.33	□□□□□ -0.28
FAM200B-222	ENST00000515697	MYCBP2	O75592	4640 aa		13.33	□□□□□ -0.28
FAM200B-222	ENST00000515697	RBFOX3	A6NFN3	312 aa		13.32	□□□□□ -0.28
FAM200B-222	ENST00000515697		Q5VSD8	79 aa		13.32	□□□□□ -0.28
FAM200B-222	ENST00000515697	FAM30A	Q9NZY2	134 aa		13.32	□□□□□ -0.28
FAM200B-222	ENST00000515697	VAX2	Q9UIW0	290 aa		13.32	□□□□□ -0.28
FAM200B-222	ENST00000515697	FLG2	Q5D862	2391 aa	Predicted RBP	13.31	□□□□□ -0.28
FAM200B-222	ENST00000515697	LECT2	O14960	151 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 170 ms