RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 IGHV3-30-3P0DP02 117 aa7□□□□□ -1.29
HMGXB3-205ENST00000514469 IGHV3-30-5P0DP03 117 aa7□□□□□ -1.29
HMGXB3-205ENST00000514469 TPT1P13693 172 aaKnown RBP7□□□□□ -1.29
HMGXB3-205ENST00000514469 SFRP2Q96HF1 295 aa7□□□□□ -1.29
HMGXB3-205ENST00000514469 Q9UF83 564 aa7□□□□□ -1.29
HMGXB3-205ENST00000514469 PHLDA3Q9Y5J5 127 aa7□□□□□ -1.29
HMGXB3-205ENST00000514469 PSCAO43653 123 aa6.99□□□□□ -1.29
HMGXB3-205ENST00000514469 PFDN1O60925 122 aa6.99□□□□□ -1.29
HMGXB3-205ENST00000514469 S100A9P06702 114 aaKnown RBP6.99□□□□□ -1.29
HMGXB3-205ENST00000514469 CXCL1P09341 107 aa6.99□□□□□ -1.29
HMGXB3-205ENST00000514469 KRTAP10-1P60331 282 aa6.99□□□□□ -1.29
HMGXB3-205ENST00000514469 FAM74A4Q5TZK3 123 aa6.99□□□□□ -1.29
HMGXB3-205ENST00000514469 ZFP82Q8N141 532 aa6.99□□□□□ -1.29
HMGXB3-205ENST00000514469 Q8N3U1 123 aa6.99□□□□□ -1.29
HMGXB3-205ENST00000514469 MLST8Q9BVC4 326 aa6.99□□□□□ -1.29
HMGXB3-205ENST00000514469 Q9HAA7 133 aa6.99□□□□□ -1.29
HMGXB3-205ENST00000514469 DNAH8Q96JB1 4490 aa6.98□□□□□ -1.29
HMGXB3-205ENST00000514469 A0A087WWC5 75 aa6.98□□□□□ -1.29
HMGXB3-205ENST00000514469 A0A087WWL8 130 aa6.98□□□□□ -1.29
HMGXB3-205ENST00000514469 M0R381 172 aa6.98□□□□□ -1.29
HMGXB3-205ENST00000514469 H2AFB1P0C5Y9 115 aa6.98□□□□□ -1.29
HMGXB3-205ENST00000514469 XGP55808 180 aa6.98□□□□□ -1.29
HMGXB3-205ENST00000514469 EIF5AP63241 154 aaKnown RBP6.98□□□□□ -1.29
HMGXB3-205ENST00000514469 TMUB2Q71RG4 321 aa6.98□□□□□ -1.29
HMGXB3-205ENST00000514469 NTN5Q8WTR8 489 aaPredicted RBP6.98□□□□□ -1.29
HMGXB3-205ENST00000514469 FAT1Q14517 4588 aa6.98□□□□□ -1.29
HMGXB3-205ENST00000514469 GCSHP23434 173 aa6.97□□□□□ -1.29
HMGXB3-205ENST00000514469 RPL19P84098 196 aaKnown RBP6.97□□□□□ -1.29
HMGXB3-205ENST00000514469 Q8N814 137 aa6.97□□□□□ -1.29
HMGXB3-205ENST00000514469 MANBALQ9NQG1 85 aa6.97□□□□□ -1.29
HMGXB3-205ENST00000514469 IGLV5-52A0A0A0MRZ9 124 aa6.96□□□□□ -1.3
HMGXB3-205ENST00000514469 TRBV10-1A0A0K0K1A3 114 aa6.96□□□□□ -1.3
HMGXB3-205ENST00000514469 SNAI2O43623 268 aa6.96□□□□□ -1.3
HMGXB3-205ENST00000514469 DAZ4Q86SG3 579 aaKnown RBP6.96□□□□□ -1.3
HMGXB3-205ENST00000514469 BAGE2Q86Y30 109 aa6.96□□□□□ -1.3
HMGXB3-205ENST00000514469 C11orf52Q96A22 123 aa6.96□□□□□ -1.3
HMGXB3-205ENST00000514469 DAZ3Q9NR90 486 aaKnown RBP6.96□□□□□ -1.3
HMGXB3-205ENST00000514469 TRAV8-3A0A0A6YYJ7 113 aa6.95□□□□□ -1.3
HMGXB3-205ENST00000514469 TRAV1-1A0A0B4J248 108 aa6.95□□□□□ -1.3
HMGXB3-205ENST00000514469 OR5AL1P0C617 328 aa6.95□□□□□ -1.3
HMGXB3-205ENST00000514469 RPL35P42766 123 aaKnown RBP6.95□□□□□ -1.3
HMGXB3-205ENST00000514469 UBE2D3P61077 147 aa6.95□□□□□ -1.3
HMGXB3-205ENST00000514469 UBE2D2P62837 147 aa6.95□□□□□ -1.3
HMGXB3-205ENST00000514469 CCL20P78556 96 aa6.95□□□□□ -1.3
HMGXB3-205ENST00000514469 TOR2AQ5JU69 321 aa6.95□□□□□ -1.3
HMGXB3-205ENST00000514469 NIT1Q86X76 327 aa6.95□□□□□ -1.3
HMGXB3-205ENST00000514469 OR10G8Q8NGN5 311 aa6.95□□□□□ -1.3
HMGXB3-205ENST00000514469 OR10AG1Q8NH19 301 aa6.95□□□□□ -1.3
HMGXB3-205ENST00000514469 DERL1Q9BUN8 251 aa6.95□□□□□ -1.3
HMGXB3-205ENST00000514469 SSBP4Q9BWG4 385 aaPredicted RBP6.95□□□□□ -1.3
HMGXB3-205ENST00000514469 TM2D2Q9BX73 214 aa6.95□□□□□ -1.3
HMGXB3-205ENST00000514469 TRBV7-3A0A075B6L6 115 aa6.94□□□□□ -1.3
HMGXB3-205ENST00000514469 EPM2AB3EWF7 344 aa6.94□□□□□ -1.3
HMGXB3-205ENST00000514469 RAB5CP51148 216 aa6.94□□□□□ -1.3
HMGXB3-205ENST00000514469 RAB4BP61018 213 aa6.94□□□□□ -1.3
HMGXB3-205ENST00000514469 RPL36AP83881 106 aaKnown RBP6.94□□□□□ -1.3
HMGXB3-205ENST00000514469 WFDC2Q14508 124 aa6.94□□□□□ -1.3
HMGXB3-205ENST00000514469 PRR27Q6MZM9 219 aa6.94□□□□□ -1.3
HMGXB3-205ENST00000514469 RPL36ALQ969Q0 106 aaKnown RBP6.94□□□□□ -1.3
HMGXB3-205ENST00000514469 CHCHD7Q9BUK0 85 aa6.94□□□□□ -1.3
HMGXB3-205ENST00000514469 GNG13Q9P2W3 67 aa6.94□□□□□ -1.3
HMGXB3-205ENST00000514469 SULT1A2P50226 295 aa6.93□□□□□ -1.3
HMGXB3-205ENST00000514469 ZNF56Q15929 161 aa6.93□□□□□ -1.3
HMGXB3-205ENST00000514469 TCTE3Q8IZS6 198 aa6.93□□□□□ -1.3
HMGXB3-205ENST00000514469 NEXN-AS1Q8NBZ9 246 aa6.93□□□□□ -1.3
HMGXB3-205ENST00000514469 TMEM70Q9BUB7 260 aa6.93□□□□□ -1.3
HMGXB3-205ENST00000514469 IGLV2-8P01709 118 aa6.92□□□□□ -1.3
HMGXB3-205ENST00000514469 CENPWQ5EE01 88 aa6.92□□□□□ -1.3
HMGXB3-205ENST00000514469 Q5VSD8 79 aa6.92□□□□□ -1.3
HMGXB3-205ENST00000514469 SPANXN1Q5VSR9 72 aa6.92□□□□□ -1.3
HMGXB3-205ENST00000514469 EIF5AL1Q6IS14 154 aaKnown RBP6.92□□□□□ -1.3
HMGXB3-205ENST00000514469 COX11Q9Y6N1 276 aa6.92□□□□□ -1.3
HMGXB3-205ENST00000514469 URGCP-MRPS24S4R325 110 aa6.92□□□□□ -1.3
HMGXB3-205ENST00000514469 MUC21A0A0G2JKD1 596 aa6.91□□□□□ -1.3
HMGXB3-205ENST00000514469 MUC21A0A140T8X8 626 aa6.91□□□□□ -1.3
HMGXB3-205ENST00000514469 C19orf71A6NCJ1 209 aa6.91□□□□□ -1.3
HMGXB3-205ENST00000514469 TEX46H3BTG2 121 aa6.91□□□□□ -1.3
HMGXB3-205ENST00000514469 MEF2BQ02080 365 aaPredicted RBP6.91□□□□□ -1.3
HMGXB3-205ENST00000514469 RMI2Q96E14 147 aa6.91□□□□□ -1.3
HMGXB3-205ENST00000514469 SMIM12Q96EX1 92 aa6.91□□□□□ -1.3
HMGXB3-205ENST00000514469 DNAJC30Q96LL9 226 aa6.91□□□□□ -1.3
HMGXB3-205ENST00000514469 AP1S3Q96PC3 154 aa6.91□□□□□ -1.3
HMGXB3-205ENST00000514469 KIF25-AS1Q9Y6Z4 181 aa6.91□□□□□ -1.3
HMGXB3-205ENST00000514469 MYCBP2O75592 4640 aa6.9□□□□□ -1.3
HMGXB3-205ENST00000514469 SRRM2Q9UQ35 2752 aaKnown RBP6.9□□□□□ -1.3
HMGXB3-205ENST00000514469 A0A087WX48 190 aa6.9□□□□□ -1.3
HMGXB3-205ENST00000514469 TRBV6-8A0A0A6YYG3 113 aa6.9□□□□□ -1.3
HMGXB3-205ENST00000514469 LECT2O14960 151 aa6.9□□□□□ -1.3
HMGXB3-205ENST00000514469 PDE6DO43924 150 aa6.9□□□□□ -1.3
HMGXB3-205ENST00000514469 C1QBP02746 253 aa6.9□□□□□ -1.3
HMGXB3-205ENST00000514469 IGLC6P0CF74 106 aa6.9□□□□□ -1.3
HMGXB3-205ENST00000514469 GNG4P50150 75 aa6.9□□□□□ -1.3
HMGXB3-205ENST00000514469 HAMPP81172 84 aa6.9□□□□□ -1.3
HMGXB3-205ENST00000514469 ELOBQ15370 118 aa6.9□□□□□ -1.3
HMGXB3-205ENST00000514469 ATRAIDQ6UW56 229 aa6.9□□□□□ -1.3
HMGXB3-205ENST00000514469 SLC51BQ86UW2 128 aa6.9□□□□□ -1.3
HMGXB3-205ENST00000514469 FRZBQ92765 325 aa6.9□□□□□ -1.3
HMGXB3-205ENST00000514469 KLK12Q9UKR0 248 aa6.9□□□□□ -1.3
HMGXB3-205ENST00000514469 HERC1Q15751 4861 aa6.89□□□□□ -1.31
HMGXB3-205ENST00000514469 TRBV20OR9-2A0A075B6H5 130 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms