RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 MUSTN1Q8IVN3 82 aa8.75□□□□□ -1.01
TCOF1-211ENST00000513346 MED12LQ86YW9 2145 aa8.75□□□□□ -1.01
TCOF1-211ENST00000513346 IGKV2D-26A0A0A0MRZ7 120 aa8.74□□□□□ -1.01
TCOF1-211ENST00000513346 J3KT08 172 aa8.74□□□□□ -1.01
TCOF1-211ENST00000513346 TCL1BO95988 128 aa8.74□□□□□ -1.01
TCOF1-211ENST00000513346 CRYGCP07315 174 aa8.74□□□□□ -1.01
TCOF1-211ENST00000513346 NDUFA11Q86Y39 141 aa8.74□□□□□ -1.01
TCOF1-211ENST00000513346 TRBV10-2A0A0K0K1G8 114 aa8.74□□□□□ -1.01
TCOF1-211ENST00000513346 K7EIM0 57 aa8.74□□□□□ -1.01
TCOF1-211ENST00000513346 GHRHP01286 108 aa8.74□□□□□ -1.01
TCOF1-211ENST00000513346 CHCHD5Q9BSY4 110 aa8.74□□□□□ -1.01
TCOF1-211ENST00000513346 DEFB113Q30KQ7 82 aa8.74□□□□□ -1.01
TCOF1-211ENST00000513346 FOXE3Q13461 319 aa8.74□□□□□ -1.01
TCOF1-211ENST00000513346 UBE2E2Q96LR5 201 aa8.74□□□□□ -1.01
TCOF1-211ENST00000513346 LENEPQ9Y5L5 61 aa8.74□□□□□ -1.01
TCOF1-211ENST00000513346 HECTD1Q9ULT8 2610 aa8.74□□□□□ -1.01
TCOF1-211ENST00000513346 TRGV1A0A0A0MS02 117 aa8.73□□□□□ -1.01
TCOF1-211ENST00000513346 DEFB131AP59861 70 aa8.73□□□□□ -1.01
TCOF1-211ENST00000513346 TOMM6Q96B49 74 aa8.73□□□□□ -1.01
TCOF1-211ENST00000513346 RPL39LQ96EH5 51 aaKnown RBP8.73□□□□□ -1.01
TCOF1-211ENST00000513346 DEFB121Q5J5C9 76 aa8.73□□□□□ -1.01
TCOF1-211ENST00000513346 BAALCQ8WXS3 180 aa8.73□□□□□ -1.01
TCOF1-211ENST00000513346 CTSZQ9UBR2 303 aa8.73□□□□□ -1.01
TCOF1-211ENST00000513346 DAZAP2Q15038 168 aaPredicted RBP8.73□□□□□ -1.01
TCOF1-211ENST00000513346 SEM1Q6ZVN7 128 aa8.73□□□□□ -1.01
TCOF1-211ENST00000513346 ZNF415Q09FC8 603 aa8.73□□□□□ -1.01
TCOF1-211ENST00000513346 MRPL53Q96EL3 112 aaKnown RBP8.73□□□□□ -1.01
TCOF1-211ENST00000513346 H3BT86 120 aa8.72□□□□□ -1.01
TCOF1-211ENST00000513346 ZFP2Q6ZN57 461 aa8.72□□□□□ -1.01
TCOF1-211ENST00000513346 C1orf159Q96HA4 380 aa8.72□□□□□ -1.01
TCOF1-211ENST00000513346 MUC22E2RYF6 1773 aaPredicted RBP8.72□□□□□ -1.01
TCOF1-211ENST00000513346 TRAV13-1A0A0B4J241 112 aa8.72□□□□□ -1.01
TCOF1-211ENST00000513346 RHOHQ15669 191 aa8.72□□□□□ -1.01
TCOF1-211ENST00000513346 NUP210LQ5VU65 1888 aa8.72□□□□□ -1.01
TCOF1-211ENST00000513346 UNC80Q8N2C7 3258 aa8.72□□□□□ -1.01
TCOF1-211ENST00000513346 SVIPQ8NHG7 77 aa8.72□□□□□ -1.01
TCOF1-211ENST00000513346 ICOSQ9Y6W8 199 aa8.72□□□□□ -1.01
TCOF1-211ENST00000513346 INSP01308 110 aa8.71□□□□□ -1.01
TCOF1-211ENST00000513346 RITA1Q96K30 269 aa8.71□□□□□ -1.01
TCOF1-211ENST00000513346 IGLV2-23P01705 113 aa8.71□□□□□ -1.01
TCOF1-211ENST00000513346 URB1-AS1Q96HZ7 61 aa8.71□□□□□ -1.01
TCOF1-211ENST00000513346 BAALC-AS2P0C853 105 aa8.71□□□□□ -1.02
TCOF1-211ENST00000513346 MALP21145 153 aa8.71□□□□□ -1.02
TCOF1-211ENST00000513346 MYCNOSP40205 109 aa8.71□□□□□ -1.02
TCOF1-211ENST00000513346 Q8N1Y9 231 aa8.71□□□□□ -1.02
TCOF1-211ENST00000513346 MAPKAPK5-AS1Q8N8E1 139 aa8.71□□□□□ -1.02
TCOF1-211ENST00000513346 PTPRSQ13332 1948 aa8.71□□□□□ -1.02
TCOF1-211ENST00000513346 RPL36AP83881 106 aaKnown RBP8.71□□□□□ -1.02
TCOF1-211ENST00000513346 NRGNQ92686 78 aa8.71□□□□□ -1.02
TCOF1-211ENST00000513346 RPL36ALQ969Q0 106 aaKnown RBP8.71□□□□□ -1.02
TCOF1-211ENST00000513346 PRRC2AP48634 2157 aaKnown RBP8.71□□□□□ -1.02
TCOF1-211ENST00000513346 C11orf86A6NJI1 115 aa8.7□□□□□ -1.02
TCOF1-211ENST00000513346 C10orf142B7Z368 130 aa8.7□□□□□ -1.02
TCOF1-211ENST00000513346 ATOX1O00244 68 aa8.7□□□□□ -1.02
TCOF1-211ENST00000513346 IGHV3-53P01767 116 aa8.7□□□□□ -1.02
TCOF1-211ENST00000513346 SRSF2Q01130 221 aaKnown RBP8.7□□□□□ -1.02
TCOF1-211ENST00000513346 WI2-2373I1.2A0A1W2PRP0 233 aa8.7□□□□□ -1.02
TCOF1-211ENST00000513346 FBXL19-AS1Q494R0 122 aa8.7□□□□□ -1.02
TCOF1-211ENST00000513346 PHLDA1Q8WV24 401 aaPredicted RBP8.7□□□□□ -1.02
TCOF1-211ENST00000513346 ACANP16112 2415 aa8.7□□□□□ -1.02
TCOF1-211ENST00000513346 LINC01619G3V211 115 aa8.7□□□□□ -1.02
TCOF1-211ENST00000513346 CGB3P0DN86 165 aa8.7□□□□□ -1.02
TCOF1-211ENST00000513346 CGB7P0DN87 165 aa8.7□□□□□ -1.02
TCOF1-211ENST00000513346 U3KQK5 164 aa8.7□□□□□ -1.02
TCOF1-211ENST00000513346 A0A0B4J2C4 111 aa8.69□□□□□ -1.02
TCOF1-211ENST00000513346 ADORA2A-AS1P86434 159 aa8.69□□□□□ -1.02
TCOF1-211ENST00000513346 GNRH2O43555 120 aa8.69□□□□□ -1.02
TCOF1-211ENST00000513346 FN1P02751 2386 aaKnown RBP8.69□□□□□ -1.02
TCOF1-211ENST00000513346 SPRY2O43597 315 aa8.69□□□□□ -1.02
TCOF1-211ENST00000513346 VWC2LB2RUY7 222 aa8.69□□□□□ -1.02
TCOF1-211ENST00000513346 INSL3P51460 131 aa8.69□□□□□ -1.02
TCOF1-211ENST00000513346 MSMPQ1L6U9 139 aa8.69□□□□□ -1.02
TCOF1-211ENST00000513346 DYSFO75923 2080 aa8.68□□□□□ -1.02
TCOF1-211ENST00000513346 IGHV4-61A0A0C4DH41 118 aa8.68□□□□□ -1.02
TCOF1-211ENST00000513346 TEX22C9J3V5 150 aa8.68□□□□□ -1.02
TCOF1-211ENST00000513346 LAMTOR3Q9UHA4 124 aa8.68□□□□□ -1.02
TCOF1-211ENST00000513346 IGLC6P0CF74 106 aa8.68□□□□□ -1.02
TCOF1-211ENST00000513346 XGP55808 180 aa8.68□□□□□ -1.02
TCOF1-211ENST00000513346 CFAP126Q5VTH2 177 aa8.68□□□□□ -1.02
TCOF1-211ENST00000513346 HIST2H2BCQ6DN03 193 aa8.68□□□□□ -1.02
TCOF1-211ENST00000513346 UBL5Q9BZL1 73 aa8.68□□□□□ -1.02
TCOF1-211ENST00000513346 PLXNB1O43157 2135 aa8.68□□□□□ -1.02
TCOF1-211ENST00000513346 DSCAML1Q8TD84 2053 aa8.68□□□□□ -1.02
TCOF1-211ENST00000513346 IGHV1OR15-1A0A075B7D0 117 aa8.68□□□□□ -1.02
TCOF1-211ENST00000513346 A0A0J9YXV3 536 aa8.68□□□□□ -1.02
TCOF1-211ENST00000513346 NDUFA4O00483 81 aa8.68□□□□□ -1.02
TCOF1-211ENST00000513346 MRPL23Q16540 153 aaKnown RBP8.68□□□□□ -1.02
TCOF1-211ENST00000513346 TRAV13-2A0A0B4J235 113 aa8.67□□□□□ -1.02
TCOF1-211ENST00000513346 PRAC2D3DTV9 90 aa8.67□□□□□ -1.02
TCOF1-211ENST00000513346 RS1O15537 224 aa8.67□□□□□ -1.02
TCOF1-211ENST00000513346 C1orf229Q6ZS94 237 aaPredicted RBP8.67□□□□□ -1.02
TCOF1-211ENST00000513346 Q8NA96 180 aa8.67□□□□□ -1.02
TCOF1-211ENST00000513346 TIMM17AQ99595 171 aa8.67□□□□□ -1.02
TCOF1-211ENST00000513346 XCL2Q9UBD3 114 aa8.67□□□□□ -1.02
TCOF1-211ENST00000513346 IGLV11-55A0A075B6I3 123 aa8.67□□□□□ -1.02
TCOF1-211ENST00000513346 RHODO00212 210 aa8.67□□□□□ -1.02
TCOF1-211ENST00000513346 DEFB112Q30KQ8 113 aa8.67□□□□□ -1.02
TCOF1-211ENST00000513346 C16orf54Q6UWD8 224 aa8.67□□□□□ -1.02
TCOF1-211ENST00000513346 DEFB130BP0DP73 79 aa8.66□□□□□ -1.02
TCOF1-211ENST00000513346 DEFB130AP0DP74 79 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms