RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 IGHV3-30-5P0DP03 117 aa8.98□□□□□ -0.97
RNF4-215ENST00000511843 TIRAPP58753 221 aa8.98□□□□□ -0.97
RNF4-215ENST00000511843 SSTP61278 116 aa8.98□□□□□ -0.97
RNF4-215ENST00000511843 OR10J3Q5JRS4 329 aa8.98□□□□□ -0.97
RNF4-215ENST00000511843 PIK3CD-AS1Q5SR53 167 aa8.98□□□□□ -0.97
RNF4-215ENST00000511843 Q8N3U1 123 aa8.98□□□□□ -0.97
RNF4-215ENST00000511843 OR10AG1Q8NH19 301 aa8.98□□□□□ -0.97
RNF4-215ENST00000511843 C11orf52Q96A22 123 aa8.98□□□□□ -0.97
RNF4-215ENST00000511843 MSRB1Q9NZV6 116 aa8.98□□□□□ -0.97
RNF4-215ENST00000511843 TRAV9-2A0A087WT02 112 aa8.97□□□□□ -0.97
RNF4-215ENST00000511843 LINC00694P0DN24 101 aa8.97□□□□□ -0.97
RNF4-215ENST00000511843 BTF3P20290 206 aaKnown RBP8.97□□□□□ -0.97
RNF4-215ENST00000511843 CENPWQ5EE01 88 aa8.97□□□□□ -0.97
RNF4-215ENST00000511843 ZFP82Q8N141 532 aa8.97□□□□□ -0.97
RNF4-215ENST00000511843 SFRP2Q96HF1 295 aa8.97□□□□□ -0.97
RNF4-215ENST00000511843 TRAV8-6A0A0B4J262 113 aa8.96□□□□□ -0.98
RNF4-215ENST00000511843 A0A1B0GVG6 124 aa8.96□□□□□ -0.98
RNF4-215ENST00000511843 RHODO00212 210 aa8.96□□□□□ -0.98
RNF4-215ENST00000511843 IGLV2-8P01709 118 aa8.96□□□□□ -0.98
RNF4-215ENST00000511843 MEF2BQ02080 365 aaPredicted RBP8.96□□□□□ -0.98
RNF4-215ENST00000511843 LELP1Q5T871 98 aa8.96□□□□□ -0.98
RNF4-215ENST00000511843 GTSF1LQ9H1H1 148 aa8.96□□□□□ -0.98
RNF4-215ENST00000511843 TEX46H3BTG2 121 aa8.95□□□□□ -0.98
RNF4-215ENST00000511843 GZMBP10144 247 aa8.95□□□□□ -0.98
RNF4-215ENST00000511843 BCL2P10415 239 aa8.95□□□□□ -0.98
RNF4-215ENST00000511843 NKX2-5P52952 324 aaPredicted RBP8.95□□□□□ -0.98
RNF4-215ENST00000511843 LINC01556Q5JQF7 62 aa8.95□□□□□ -0.98
RNF4-215ENST00000511843 ALKAL2Q6UX46 152 aa8.95□□□□□ -0.98
RNF4-215ENST00000511843 KRTAP17-1Q9BYP8 105 aa8.95□□□□□ -0.98
RNF4-215ENST00000511843 Q9HAA7 133 aa8.95□□□□□ -0.98
RNF4-215ENST00000511843 TRBV20OR9-2A0A075B6H5 130 aa8.94□□□□□ -0.98
RNF4-215ENST00000511843 IFNA1P01562 189 aa8.94□□□□□ -0.98
RNF4-215ENST00000511843 ERVFC1-1P60608 527 aa8.94□□□□□ -0.98
RNF4-215ENST00000511843 NFE4Q86UQ8 179 aa8.94□□□□□ -0.98
RNF4-215ENST00000511843 MED9Q9NWA0 146 aa8.94□□□□□ -0.98
RNF4-215ENST00000511843 SNAI2O43623 268 aa8.93□□□□□ -0.98
RNF4-215ENST00000511843 GNG4P50150 75 aa8.93□□□□□ -0.98
RNF4-215ENST00000511843 C10orf126Q8N4M7 172 aa8.93□□□□□ -0.98
RNF4-215ENST00000511843 LRP1BQ9NZR2 4599 aa8.93□□□□□ -0.98
RNF4-215ENST00000511843 A0A087WTM6 91 aa8.92□□□□□ -0.98
RNF4-215ENST00000511843 RBFOX3A6NFN3 312 aa8.92□□□□□ -0.98
RNF4-215ENST00000511843 PDE6DO43924 150 aa8.92□□□□□ -0.98
RNF4-215ENST00000511843 CXCL1P09341 107 aa8.92□□□□□ -0.98
RNF4-215ENST00000511843 ZNF56Q15929 161 aa8.92□□□□□ -0.98
RNF4-215ENST00000511843 SPANXN1Q5VSR9 72 aa8.92□□□□□ -0.98
RNF4-215ENST00000511843 TPPP3Q9BW30 176 aa8.92□□□□□ -0.98
RNF4-215ENST00000511843 SSBP4Q9BWG4 385 aaPredicted RBP8.92□□□□□ -0.98
RNF4-215ENST00000511843 VAX2Q9UIW0 290 aa8.92□□□□□ -0.98
RNF4-215ENST00000511843 BOLA1Q9Y3E2 137 aa8.92□□□□□ -0.98
RNF4-215ENST00000511843 DNAH5Q8TE73 4624 aa8.91□□□□□ -0.98
RNF4-215ENST00000511843 HSPG2P98160 4391 aa8.91□□□□□ -0.98
RNF4-215ENST00000511843 C19orf71A6NCJ1 209 aa8.91□□□□□ -0.98
RNF4-215ENST00000511843 IBA57-AS1B1ANH7 110 aa8.91□□□□□ -0.98
RNF4-215ENST00000511843 K7EP13 123 aa8.91□□□□□ -0.98
RNF4-215ENST00000511843 OR5AL1P0C617 328 aa8.91□□□□□ -0.98
RNF4-215ENST00000511843 DAZ4Q86SG3 579 aaKnown RBP8.91□□□□□ -0.98
RNF4-215ENST00000511843 OR2D3Q8NGH3 330 aa8.91□□□□□ -0.98
RNF4-215ENST00000511843 DAZAP1Q96EP5 407 aaKnown RBP8.91□□□□□ -0.98
RNF4-215ENST00000511843 KRTAP4-5Q9BYR2 181 aa8.91□□□□□ -0.98
RNF4-215ENST00000511843 DAZ3Q9NR90 486 aaKnown RBP8.91□□□□□ -0.98
RNF4-215ENST00000511843 ABCA13Q86UQ4 5058 aa8.9□□□□□ -0.98
RNF4-215ENST00000511843 APOBP04114 4563 aaKnown RBP8.89□□□□□ -0.99
RNF4-215ENST00000511843 F5H697 171 aa8.89□□□□□ -0.99
RNF4-215ENST00000511843 EREGO14944 169 aa8.89□□□□□ -0.99
RNF4-215ENST00000511843 PSCAO43653 123 aa8.89□□□□□ -0.99
RNF4-215ENST00000511843 CDK2AP2O75956 126 aa8.89□□□□□ -0.99
RNF4-215ENST00000511843 IGLC6P0CF74 106 aa8.89□□□□□ -0.99
RNF4-215ENST00000511843 RAB4BP61018 213 aa8.89□□□□□ -0.99
RNF4-215ENST00000511843 RPL36AP83881 106 aaKnown RBP8.89□□□□□ -0.99
RNF4-215ENST00000511843 FER1L6-AS1Q8NA97 138 aa8.89□□□□□ -0.99
RNF4-215ENST00000511843 NEXN-AS1Q8NBZ9 246 aa8.89□□□□□ -0.99
RNF4-215ENST00000511843 RPL36ALQ969Q0 106 aaKnown RBP8.89□□□□□ -0.99
RNF4-215ENST00000511843 TRBV7-3A0A075B6L6 115 aa8.88□□□□□ -0.99
RNF4-215ENST00000511843 A0A087WWC5 75 aa8.88□□□□□ -0.99
RNF4-215ENST00000511843 TRBV10-1A0A0K0K1A3 114 aa8.88□□□□□ -0.99
RNF4-215ENST00000511843 P01737 135 aa8.88□□□□□ -0.99
RNF4-215ENST00000511843 UBE2D3P61077 147 aa8.88□□□□□ -0.99
RNF4-215ENST00000511843 UBE2D2P62837 147 aa8.88□□□□□ -0.99
RNF4-215ENST00000511843 DNAJC30Q96LL9 226 aa8.88□□□□□ -0.99
RNF4-215ENST00000511843 KIF25-AS1Q9Y6Z4 181 aa8.88□□□□□ -0.99
RNF4-215ENST00000511843 LRCOL1A6NCL2 159 aa8.87□□□□□ -0.99
RNF4-215ENST00000511843 K7EN84 100 aa8.87□□□□□ -0.99
RNF4-215ENST00000511843 RPS20P60866 119 aaKnown RBP8.87□□□□□ -0.99
RNF4-215ENST00000511843 BLOC1S1P78537 153 aa8.87□□□□□ -0.99
RNF4-215ENST00000511843 NUDT10Q8NFP7 164 aa8.87□□□□□ -0.99
RNF4-215ENST00000511843 SMIM12Q96EX1 92 aa8.87□□□□□ -0.99
RNF4-215ENST00000511843 NUDT11Q96G61 164 aa8.87□□□□□ -0.99
RNF4-215ENST00000511843 AP1S3Q96PC3 154 aa8.87□□□□□ -0.99
RNF4-215ENST00000511843 MGPP08493 103 aa8.86□□□□□ -0.99
RNF4-215ENST00000511843 SMIM17P0DL12 118 aa8.86□□□□□ -0.99
RNF4-215ENST00000511843 CEBPGP53567 150 aa8.86□□□□□ -0.99
RNF4-215ENST00000511843 WFDC2Q14508 124 aa8.86□□□□□ -0.99
RNF4-215ENST00000511843 LYZL1Q6UWQ5 148 aa8.86□□□□□ -0.99
RNF4-215ENST00000511843 NIT1Q86X76 327 aa8.86□□□□□ -0.99
RNF4-215ENST00000511843 MAPKAPK5-AS1Q8N8E1 139 aa8.86□□□□□ -0.99
RNF4-215ENST00000511843 OR10G8Q8NGN5 311 aa8.86□□□□□ -0.99
RNF4-215ENST00000511843 OCC1Q8TAD7 63 aa8.86□□□□□ -0.99
RNF4-215ENST00000511843 RNASE7Q9H1E1 156 aaKnown RBP8.86□□□□□ -0.99
RNF4-215ENST00000511843 PGPEP1Q9NXJ5 209 aa8.86□□□□□ -0.99
RNF4-215ENST00000511843 TAGLN2P37802 199 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms