RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 K7EMT4 169 aa12.02□□□□□ -0.49
SQSTM1-213ENST00000510187 PPP1R17O96001 155 aa12.02□□□□□ -0.49
SQSTM1-213ENST00000510187 S100A4P26447 101 aaKnown RBP12.02□□□□□ -0.49
SQSTM1-213ENST00000510187 PLNP26678 52 aa12.02□□□□□ -0.49
SQSTM1-213ENST00000510187 RBX1P62877 108 aa12.02□□□□□ -0.49
SQSTM1-213ENST00000510187 GTF2H5Q6ZYL4 71 aa12.02□□□□□ -0.49
SQSTM1-213ENST00000510187 DAZ1Q9NQZ3 744 aaKnown RBP12.02□□□□□ -0.49
SQSTM1-213ENST00000510187 NXPH4O95158 308 aa12.01□□□□□ -0.49
SQSTM1-213ENST00000510187 C18orf65Q6ZTR6 163 aa12.01□□□□□ -0.49
SQSTM1-213ENST00000510187 RHPN1-AS1Q9BWJ2 59 aa12.01□□□□□ -0.49
SQSTM1-213ENST00000510187 IGKV2D-26A0A0A0MRZ7 120 aa12□□□□□ -0.49
SQSTM1-213ENST00000510187 CDKN1BP46527 198 aa12□□□□□ -0.49
SQSTM1-213ENST00000510187 SUMO2P61956 95 aaKnown RBP12□□□□□ -0.49
SQSTM1-213ENST00000510187 ANXA2RQ3ZCQ2 193 aa12□□□□□ -0.49
SQSTM1-213ENST00000510187 ZC2HC1BQ5TFG8 222 aa12□□□□□ -0.49
SQSTM1-213ENST00000510187 C4orf3Q8WVX3 66 aa12□□□□□ -0.49
SQSTM1-213ENST00000510187 CITED2Q99967 270 aaPredicted RBP12□□□□□ -0.49
SQSTM1-213ENST00000510187 PHLDA3Q9Y5J5 127 aa12□□□□□ -0.49
SQSTM1-213ENST00000510187 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12□□□□□ -0.49
SQSTM1-213ENST00000510187 TCTAP57738 103 aa12□□□□□ -0.49
SQSTM1-213ENST00000510187 POM121L12Q8N7R1 296 aa12□□□□□ -0.49
SQSTM1-213ENST00000510187 KLHL30-AS1Q8NEE0 82 aa12□□□□□ -0.49
SQSTM1-213ENST00000510187 RASL10AQ92737 203 aa12□□□□□ -0.49
SQSTM1-213ENST00000510187 TOMM6Q96B49 74 aa12□□□□□ -0.49
SQSTM1-213ENST00000510187 MRPL35Q9NZE8 188 aaKnown RBP12□□□□□ -0.49
SQSTM1-213ENST00000510187 GAGE10A6NGK3 116 aa11.99□□□□□ -0.49
SQSTM1-213ENST00000510187 ID1P41134 155 aa11.99□□□□□ -0.49
SQSTM1-213ENST00000510187 UFSP1Q6NVU6 142 aa11.99□□□□□ -0.49
SQSTM1-213ENST00000510187 WFDC12Q8WWY7 111 aa11.99□□□□□ -0.49
SQSTM1-213ENST00000510187 CHAC1Q9BUX1 264 aa11.99□□□□□ -0.49
SQSTM1-213ENST00000510187 CST9LQ9H4G1 147 aa11.99□□□□□ -0.49
SQSTM1-213ENST00000510187 TSSC4Q9Y5U2 329 aaPredicted RBP11.99□□□□□ -0.49
SQSTM1-213ENST00000510187 IGHV4OR15-8A0A075B7B6 117 aa11.98□□□□□ -0.49
SQSTM1-213ENST00000510187 A0A087WW49 117 aa11.98□□□□□ -0.49
SQSTM1-213ENST00000510187 A0A1W2PRX2 142 aa11.98□□□□□ -0.49
SQSTM1-213ENST00000510187 RNASE4P34096 147 aaKnown RBP11.98□□□□□ -0.49
SQSTM1-213ENST00000510187 RPL11P62913 178 aaKnown RBP11.98□□□□□ -0.49
SQSTM1-213ENST00000510187 DEFB136Q30KP8 78 aa11.98□□□□□ -0.49
SQSTM1-213ENST00000510187 PRIMA1Q86XR5 153 aa11.98□□□□□ -0.49
SQSTM1-213ENST00000510187 KLLNB2CW77 178 aa11.97□□□□□ -0.49
SQSTM1-213ENST00000510187 H7C1H1 209 aa11.97□□□□□ -0.49
SQSTM1-213ENST00000510187 J3KRW8 73 aa11.97□□□□□ -0.49
SQSTM1-213ENST00000510187 K7EP34 96 aa11.97□□□□□ -0.49
SQSTM1-213ENST00000510187 RPL32P62910 135 aaKnown RBP11.97□□□□□ -0.49
SQSTM1-213ENST00000510187 GTSCR1Q86UQ5 136 aa11.97□□□□□ -0.49
SQSTM1-213ENST00000510187 TRBV25-1A0A075B6N4 114 aa11.97□□□□□ -0.49
SQSTM1-213ENST00000510187 F8VRH5 84 aa11.97□□□□□ -0.49
SQSTM1-213ENST00000510187 RNASE3P12724 160 aaKnown RBP11.97□□□□□ -0.49
SQSTM1-213ENST00000510187 KRTAP10-3P60369 221 aa11.97□□□□□ -0.49
SQSTM1-213ENST00000510187 TAL2Q16559 108 aa11.97□□□□□ -0.49
SQSTM1-213ENST00000510187 TM4SF20Q53R12 229 aa11.97□□□□□ -0.49
SQSTM1-213ENST00000510187 OR11H1Q8NG94 326 aa11.97□□□□□ -0.49
SQSTM1-213ENST00000510187 GAGE12BA1L429 117 aa11.96□□□□□ -0.49
SQSTM1-213ENST00000510187 LINC01549A6NIU2 74 aa11.96□□□□□ -0.49
SQSTM1-213ENST00000510187 H3BUT2 72 aa11.96□□□□□ -0.49
SQSTM1-213ENST00000510187 SMIM13P0DJ93 91 aa11.96□□□□□ -0.49
SQSTM1-213ENST00000510187 KRTAP24-1Q3LI83 254 aa11.96□□□□□ -0.49
SQSTM1-213ENST00000510187 ODF3Q96PU9 254 aa11.96□□□□□ -0.49
SQSTM1-213ENST00000510187 TM2D2Q9BX73 214 aa11.96□□□□□ -0.49
SQSTM1-213ENST00000510187 LINC01619G3V211 115 aa11.95□□□□□ -0.5
SQSTM1-213ENST00000510187 HOXD3P31249 432 aaPredicted RBP11.95□□□□□ -0.5
SQSTM1-213ENST00000510187 OCIAD2Q56VL3 154 aa11.95□□□□□ -0.5
SQSTM1-213ENST00000510187 C14orf178Q8N769 122 aaPredicted RBP11.95□□□□□ -0.5
SQSTM1-213ENST00000510187 OR5A1Q8NGJ0 315 aa11.95□□□□□ -0.5
SQSTM1-213ENST00000510187 DUX3Q96PT4 197 aa11.95□□□□□ -0.5
SQSTM1-213ENST00000510187 SCGB3A1Q96QR1 104 aa11.95□□□□□ -0.5
SQSTM1-213ENST00000510187 A0A1W2PPM0 123 aa11.94□□□□□ -0.5
SQSTM1-213ENST00000510187 F6UB75 175 aa11.94□□□□□ -0.5
SQSTM1-213ENST00000510187 MGPP08493 103 aa11.94□□□□□ -0.5
SQSTM1-213ENST00000510187 GCSHP23434 173 aa11.94□□□□□ -0.5
SQSTM1-213ENST00000510187 DEFB1P60022 68 aa11.94□□□□□ -0.5
SQSTM1-213ENST00000510187 NEXN-AS1Q8NBZ9 246 aa11.94□□□□□ -0.5
SQSTM1-213ENST00000510187 DCANP1Q8TF63 244 aa11.94□□□□□ -0.5
SQSTM1-213ENST00000510187 SLURP1P55000 103 aa11.93□□□□□ -0.5
SQSTM1-213ENST00000510187 SYNJ2BPP57105 145 aa11.93□□□□□ -0.5
SQSTM1-213ENST00000510187 NSUN5P1Q3KNT7 163 aa11.93□□□□□ -0.5
SQSTM1-213ENST00000510187 CEND1Q8N111 149 aa11.93□□□□□ -0.5
SQSTM1-213ENST00000510187 RPL39LQ96EH5 51 aaKnown RBP11.93□□□□□ -0.5
SQSTM1-213ENST00000510187 CHTOPQ9Y3Y2 248 aaKnown RBP11.93□□□□□ -0.5
SQSTM1-213ENST00000510187 GNRH2O43555 120 aa11.92□□□□□ -0.5
SQSTM1-213ENST00000510187 FXYD2P54710 66 aa11.92□□□□□ -0.5
SQSTM1-213ENST00000510187 FAM159AQ6UWV7 190 aa11.92□□□□□ -0.5
SQSTM1-213ENST00000510187 NDUFA11Q86Y39 141 aa11.92□□□□□ -0.5
SQSTM1-213ENST00000510187 RAX2Q96IS3 184 aa11.92□□□□□ -0.5
SQSTM1-213ENST00000510187 TTTY13Q9BZ97 58 aa11.92□□□□□ -0.5
SQSTM1-213ENST00000510187 KIF25-AS1Q9Y6Z4 181 aa11.92□□□□□ -0.5
SQSTM1-213ENST00000510187 ATRQ13535 2644 aa11.92□□□□□ -0.5
SQSTM1-213ENST00000510187 ADARB2-AS1A8MUL3 147 aa11.91□□□□□ -0.5
SQSTM1-213ENST00000510187 K7ERU9 68 aa11.91□□□□□ -0.5
SQSTM1-213ENST00000510187 CCL24O00175 119 aa11.91□□□□□ -0.5
SQSTM1-213ENST00000510187 FABP2P12104 132 aa11.91□□□□□ -0.5
SQSTM1-213ENST00000510187 C2orf66Q6UXQ4 117 aa11.91□□□□□ -0.5
SQSTM1-213ENST00000510187 LGALS9O00182 355 aa11.91□□□□□ -0.5
SQSTM1-213ENST00000510187 LINC00315P59091 139 aa11.91□□□□□ -0.5
SQSTM1-213ENST00000510187 IGKV3-7A0A075B6H7 116 aa11.9□□□□□ -0.5
SQSTM1-213ENST00000510187 FHL3Q13643 280 aa11.9□□□□□ -0.5
SQSTM1-213ENST00000510187 SAMD5Q5TGI4 173 aa11.9□□□□□ -0.5
SQSTM1-213ENST00000510187 RAB37Q96AX2 223 aa11.9□□□□□ -0.5
SQSTM1-213ENST00000510187 CSTL1Q9H114 145 aa11.9□□□□□ -0.5
SQSTM1-213ENST00000510187 SPCS1Q9Y6A9 102 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms