RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 NUMA1Q14980 2115 aa1.65□□□□□ -2.14
TRAPPC13-208ENST00000505553 WDFY4Q6ZS81 3184 aa1.65□□□□□ -2.14
TRAPPC13-208ENST00000505553 CNOT1A5YKK6 2376 aaKnown RBP1.65□□□□□ -2.14
TRAPPC13-208ENST00000505553 A0A1B0GUL6 1792 aa1.65□□□□□ -2.15
TRAPPC13-208ENST00000505553 HECTD1Q9ULT8 2610 aa1.65□□□□□ -2.15
TRAPPC13-208ENST00000505553 PTPN13Q12923 2485 aa1.65□□□□□ -2.15
TRAPPC13-208ENST00000505553 MYO5AQ9Y4I1 1855 aaKnown RBP1.65□□□□□ -2.15
TRAPPC13-208ENST00000505553 OTOGLQ3ZCN5 2332 aa1.65□□□□□ -2.15
TRAPPC13-208ENST00000505553 PTPRFP10586 1907 aa1.65□□□□□ -2.15
TRAPPC13-208ENST00000505553 WDR87Q6ZQQ6 2873 aa1.65□□□□□ -2.15
TRAPPC13-208ENST00000505553 REV3LO60673 3130 aa1.65□□□□□ -2.15
TRAPPC13-208ENST00000505553 J3QKU1 62 aa1.65□□□□□ -2.15
TRAPPC13-208ENST00000505553 CCL16O15467 120 aa1.65□□□□□ -2.15
TRAPPC13-208ENST00000505553 SMIM24O75264 130 aa1.65□□□□□ -2.15
TRAPPC13-208ENST00000505553 TEN1Q86WV5 123 aa1.65□□□□□ -2.15
TRAPPC13-208ENST00000505553 GKN2Q86XP6 184 aa1.65□□□□□ -2.15
TRAPPC13-208ENST00000505553 PATE1Q8WXA2 126 aa1.65□□□□□ -2.15
TRAPPC13-208ENST00000505553 TSC22D3Q99576 134 aa1.65□□□□□ -2.15
TRAPPC13-208ENST00000505553 CYSTM1Q9H1C7 97 aa1.65□□□□□ -2.15
TRAPPC13-208ENST00000505553 MYO9AB2RTY4 2548 aa1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 ZNF236Q9UL36 1845 aa1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 ANKRD17O75179 2603 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 SPTA1P02549 2419 aa1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 ICE1Q9Y2F5 2266 aa1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 DNAH14Q0VDD8 3507 aa1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 C9orf170A2RU37 121 aa1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 C5orf67F2Z3F1 127 aa1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 TCRAP04437 139 aa1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 SLC25A5P05141 298 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 HIST1H1BP16401 226 aaKnown RBP1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 ETV6P41212 452 aa1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 KRTAP12-1P59990 96 aa1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 QRFPP83859 136 aa1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 DIAPH2-AS1Q14236 149 aa1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 KRTAP26-1Q6PEX3 210 aa1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 MMGT1Q8N4V1 131 aa1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 OR10AG1Q8NH19 301 aa1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 Q8TAT8 98 aa1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 PSMF1Q92530 271 aa1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 LINC00052Q96N35 136 aa1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 DCHS1Q96JQ0 3298 aa1.64□□□□□ -2.15
TRAPPC13-208ENST00000505553 ABCA12Q86UK0 2595 aa1.63□□□□□ -2.15
TRAPPC13-208ENST00000505553 MYO15AQ9UKN7 3530 aa1.63□□□□□ -2.15
TRAPPC13-208ENST00000505553 TEP1Q99973 2627 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-208ENST00000505553 SIP14410 1827 aa1.63□□□□□ -2.15
TRAPPC13-208ENST00000505553 CHD7Q9P2D1 2997 aa1.63□□□□□ -2.15
TRAPPC13-208ENST00000505553 MYH10P35580 1976 aa1.63□□□□□ -2.15
TRAPPC13-208ENST00000505553 A0A096LPI6 279 aa1.63□□□□□ -2.15
TRAPPC13-208ENST00000505553 F8W1H4 67 aa1.63□□□□□ -2.15
TRAPPC13-208ENST00000505553 M0R2Z0 102 aa1.63□□□□□ -2.15
TRAPPC13-208ENST00000505553 PRB1P04280 392 aa1.63□□□□□ -2.15
TRAPPC13-208ENST00000505553 CCL4P13236 92 aa1.63□□□□□ -2.15
TRAPPC13-208ENST00000505553 COX7CP15954 63 aa1.63□□□□□ -2.15
TRAPPC13-208ENST00000505553 HIST1H1AQ02539 215 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-208ENST00000505553 OR8J3Q8NGG0 315 aa1.63□□□□□ -2.15
TRAPPC13-208ENST00000505553 SMIM3Q9BZL3 60 aa1.63□□□□□ -2.15
TRAPPC13-208ENST00000505553 BANF2Q9H503 90 aa1.63□□□□□ -2.15
TRAPPC13-208ENST00000505553 FKBP11Q9NYL4 201 aa1.63□□□□□ -2.15
TRAPPC13-208ENST00000505553 SPTAN1Q13813 2472 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-208ENST00000505553 COL11A1P12107 1806 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-208ENST00000505553 CDK5RAP2Q96SN8 1893 aa1.62□□□□□ -2.15
TRAPPC13-208ENST00000505553 MYLKQ15746 1914 aa1.62□□□□□ -2.15
TRAPPC13-208ENST00000505553 DOPEY1Q5JWR5 2465 aa1.62□□□□□ -2.15
TRAPPC13-208ENST00000505553 IGKV3D-7A0A0C4DH55 119 aa1.62□□□□□ -2.15
TRAPPC13-208ENST00000505553 IGKV3OR2-268A0A0C4DH90 116 aa1.62□□□□□ -2.15
TRAPPC13-208ENST00000505553 PNMA8CA0A1B0GUJ8 204 aa1.62□□□□□ -2.15
TRAPPC13-208ENST00000505553 J3QR89 54 aa1.62□□□□□ -2.15
TRAPPC13-208ENST00000505553 SLC25A4P12235 298 aa1.62□□□□□ -2.15
TRAPPC13-208ENST00000505553 BLCAPP62952 87 aa1.62□□□□□ -2.15
TRAPPC13-208ENST00000505553 ASB16-AS1Q495Z4 193 aa1.62□□□□□ -2.15
TRAPPC13-208ENST00000505553 UNQ6190/PRO20217Q6UXQ8 127 aa1.62□□□□□ -2.15
TRAPPC13-208ENST00000505553 CASC2Q6XLA1 102 aa1.62□□□□□ -2.15
TRAPPC13-208ENST00000505553 KRTAP13-1Q8IUC0 172 aa1.62□□□□□ -2.15
TRAPPC13-208ENST00000505553 LINC00269Q8N2A0 174 aa1.62□□□□□ -2.15
TRAPPC13-208ENST00000505553 C15orf53Q8NAA6 179 aa1.62□□□□□ -2.15
TRAPPC13-208ENST00000505553 NABP2Q9BQ15 211 aa1.62□□□□□ -2.15
TRAPPC13-208ENST00000505553 TPT1P8Q9HAU6 139 aa1.62□□□□□ -2.15
TRAPPC13-208ENST00000505553 CDC42SE1Q9NRR8 79 aa1.62□□□□□ -2.15
TRAPPC13-208ENST00000505553 Q9Y3F1 56 aa1.62□□□□□ -2.15
TRAPPC13-208ENST00000505553 DMDP11532 3685 aa1.62□□□□□ -2.15
TRAPPC13-208ENST00000505553 DNAH12Q6ZR08 3092 aa1.61□□□□□ -2.15
TRAPPC13-208ENST00000505553 TANC1Q9C0D5 1861 aa1.61□□□□□ -2.15
TRAPPC13-208ENST00000505553 C3orf85A0A1B0GTC6 90 aa1.61□□□□□ -2.15
TRAPPC13-208ENST00000505553 TRBV6-4A0A1B0GX49 114 aa1.61□□□□□ -2.15
TRAPPC13-208ENST00000505553 HCRTO43612 131 aa1.61□□□□□ -2.15
TRAPPC13-208ENST00000505553 MPV17LQ2QL34 196 aa1.61□□□□□ -2.15
TRAPPC13-208ENST00000505553 FOXI2Q6ZQN5 318 aa1.61□□□□□ -2.15
TRAPPC13-208ENST00000505553 IGSF10Q6WRI0 2623 aa1.61□□□□□ -2.15
TRAPPC13-208ENST00000505553 DMXL1Q9Y485 3027 aa1.61□□□□□ -2.15
TRAPPC13-208ENST00000505553 BPTFQ12830 3046 aa1.6□□□□□ -2.15
TRAPPC13-208ENST00000505553 ZNF727A8MUV8 499 aa1.6□□□□□ -2.15
TRAPPC13-208ENST00000505553 H3BRM9 83 aa1.6□□□□□ -2.15
TRAPPC13-208ENST00000505553 HLA-DRB4P13762 266 aa1.6□□□□□ -2.15
TRAPPC13-208ENST00000505553 CKS2P33552 79 aa1.6□□□□□ -2.15
TRAPPC13-208ENST00000505553 AKR1D1P51857 326 aa1.6□□□□□ -2.15
TRAPPC13-208ENST00000505553 PCBD1P61457 104 aa1.6□□□□□ -2.15
TRAPPC13-208ENST00000505553 MIR22HGQ0VDD5 57 aa1.6□□□□□ -2.15
TRAPPC13-208ENST00000505553 TMEM91Q6ZNR0 172 aa1.6□□□□□ -2.15
TRAPPC13-208ENST00000505553 TSTD1Q8NFU3 115 aa1.6□□□□□ -2.15
TRAPPC13-208ENST00000505553 CIB3Q96Q77 187 aaPredicted RBP1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms