RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 OCC1Q8TAD7 63 aa17.29■□□□□ 0.36
PVT1-201ENST00000504719 TRBV6-4A0A1B0GX49 114 aa17.28■□□□□ 0.36
PVT1-201ENST00000504719 P01737 135 aa17.28■□□□□ 0.36
PVT1-201ENST00000504719 OR10AG1Q8NH19 301 aa17.28■□□□□ 0.36
PVT1-201ENST00000504719 C16orf90A8MZG2 172 aa17.27■□□□□ 0.36
PVT1-201ENST00000504719 K7EN84 100 aa17.27■□□□□ 0.36
PVT1-201ENST00000504719 SNAI2O43623 268 aa17.27■□□□□ 0.36
PVT1-201ENST00000504719 GZMBP10144 247 aa17.27■□□□□ 0.36
PVT1-201ENST00000504719 UFSP1Q6NVU6 142 aa17.27■□□□□ 0.36
PVT1-201ENST00000504719 SFRP2Q96HF1 295 aa17.27■□□□□ 0.36
PVT1-201ENST00000504719 PRADC1Q9BSG0 188 aa17.27■□□□□ 0.36
PVT1-201ENST00000504719 SSBP4Q9BWG4 385 aaPredicted RBP17.27■□□□□ 0.36
PVT1-201ENST00000504719 MUC21A0A0G2JKD1 596 aa17.26■□□□□ 0.35
PVT1-201ENST00000504719 MUC21A0A140T8X8 626 aa17.26■□□□□ 0.35
PVT1-201ENST00000504719 NDUFS6O75380 124 aaKnown RBP17.26■□□□□ 0.35
PVT1-201ENST00000504719 OR5AL1P0C617 328 aa17.26■□□□□ 0.35
PVT1-201ENST00000504719 RPS20P60866 119 aaKnown RBP17.26■□□□□ 0.35
PVT1-201ENST00000504719 RHOHQ15669 191 aa17.26■□□□□ 0.35
PVT1-201ENST00000504719 Q6ZRN7 208 aaPredicted RBP17.26■□□□□ 0.35
PVT1-201ENST00000504719 Q6ZSN1 163 aa17.26■□□□□ 0.35
PVT1-201ENST00000504719 SH2D6Q7Z4S9 175 aa17.26■□□□□ 0.35
PVT1-201ENST00000504719 A0A087WWL8 130 aa17.25■□□□□ 0.35
PVT1-201ENST00000504719 SRP19P09132 144 aaKnown RBP17.25■□□□□ 0.35
PVT1-201ENST00000504719 FAM74A4Q5TZK3 123 aa17.25■□□□□ 0.35
PVT1-201ENST00000504719 NUDT10Q8NFP7 164 aa17.25■□□□□ 0.35
PVT1-201ENST00000504719 NUDT11Q96G61 164 aa17.25■□□□□ 0.35
PVT1-201ENST00000504719 RYR1P21817 5038 aa17.24■□□□□ 0.35
PVT1-201ENST00000504719 RHODO00212 210 aa17.24■□□□□ 0.35
PVT1-201ENST00000504719 WFDC10BQ8IUB3 73 aa17.24■□□□□ 0.35
PVT1-201ENST00000504719 LY96Q9Y6Y9 160 aa17.24■□□□□ 0.35
PVT1-201ENST00000504719 XKRY2A2RUG3 117 aa17.23■□□□□ 0.35
PVT1-201ENST00000504719 SSTP61278 116 aa17.23■□□□□ 0.35
PVT1-201ENST00000504719 SPANXN1Q5VSR9 72 aa17.23■□□□□ 0.35
PVT1-201ENST00000504719 SPATA12Q7Z6I5 190 aa17.23■□□□□ 0.35
PVT1-201ENST00000504719 SMIM7Q9BQ49 75 aa17.23■□□□□ 0.35
PVT1-201ENST00000504719 TPPP3Q9BW30 176 aa17.23■□□□□ 0.35
PVT1-201ENST00000504719 RNASE7Q9H1E1 156 aaKnown RBP17.23■□□□□ 0.35
PVT1-201ENST00000504719 TRAV9-2A0A087WT02 112 aa17.22■□□□□ 0.35
PVT1-201ENST00000504719 CRYGDP07320 174 aa17.22■□□□□ 0.35
PVT1-201ENST00000504719 IGLC6P0CF74 106 aa17.22■□□□□ 0.35
PVT1-201ENST00000504719 TIRAPP58753 221 aa17.22■□□□□ 0.35
PVT1-201ENST00000504719 FER1L6-AS1Q8NA97 138 aa17.22■□□□□ 0.35
PVT1-201ENST00000504719 KRTAP17-1Q9BYP8 105 aa17.22■□□□□ 0.35
PVT1-201ENST00000504719 LRP1BQ9NZR2 4599 aa17.22■□□□□ 0.35
PVT1-201ENST00000504719 TNFRSF18Q9Y5U5 241 aa17.21■□□□□ 0.35
PVT1-201ENST00000504719 ZNF727A8MUV8 499 aa17.2■□□□□ 0.34
PVT1-201ENST00000504719 K7EP13 123 aa17.2■□□□□ 0.34
PVT1-201ENST00000504719 DNAH10OSP0CZ25 163 aa17.2■□□□□ 0.34
PVT1-201ENST00000504719 C14orf178Q8N769 122 aaPredicted RBP17.2■□□□□ 0.34
PVT1-201ENST00000504719 RPP21Q9H633 154 aaKnown RBP17.2■□□□□ 0.34
PVT1-201ENST00000504719 SRSF3P84103 164 aaKnown RBP17.19■□□□□ 0.34
PVT1-201ENST00000504719 C9JQL5 133 aa17.18■□□□□ 0.34
PVT1-201ENST00000504719 EVI2AP22794 236 aa17.18■□□□□ 0.34
PVT1-201ENST00000504719 KRTAP10-2P60368 255 aa17.18■□□□□ 0.34
PVT1-201ENST00000504719 NFE4Q86UQ8 179 aa17.18■□□□□ 0.34
PVT1-201ENST00000504719 PEA15Q15121 130 aa17.17■□□□□ 0.34
PVT1-201ENST00000504719 Q9UF83 564 aa17.17■□□□□ 0.34
PVT1-201ENST00000504719 GAGE12JA6NER3 117 aa17.16■□□□□ 0.34
PVT1-201ENST00000504719 GAGE1Q13065 139 aa17.16■□□□□ 0.34
PVT1-201ENST00000504719 GAGE4Q13068 117 aa17.16■□□□□ 0.34
PVT1-201ENST00000504719 GAGE5Q13069 117 aa17.16■□□□□ 0.34
PVT1-201ENST00000504719 GAGE13Q4V321 117 aa17.16■□□□□ 0.34
PVT1-201ENST00000504719 LYZL1Q6UWQ5 148 aa17.16■□□□□ 0.34
PVT1-201ENST00000504719 LINC01551Q86U37 167 aa17.16■□□□□ 0.34
PVT1-201ENST00000504719 F2Z2F3 143 aa17.15■□□□□ 0.34
PVT1-201ENST00000504719 FAM231DQ6ZW35 169 aa17.15■□□□□ 0.34
PVT1-201ENST00000504719 MSRB1Q9NZV6 116 aa17.15■□□□□ 0.34
PVT1-201ENST00000504719 DNAH5Q8TE73 4624 aa17.14■□□□□ 0.34
PVT1-201ENST00000504719 GATCO43716 136 aaKnown RBP17.14■□□□□ 0.33
PVT1-201ENST00000504719 CDK2AP2O75956 126 aa17.14■□□□□ 0.33
PVT1-201ENST00000504719 ERVFC1-1P60608 527 aa17.14■□□□□ 0.33
PVT1-201ENST00000504719 CACNG7P62955 275 aa17.14■□□□□ 0.33
PVT1-201ENST00000504719 ATP6V0E2Q8NHE4 81 aa17.14■□□□□ 0.33
PVT1-201ENST00000504719 AP1S3Q96PC3 154 aa17.14■□□□□ 0.33
PVT1-201ENST00000504719 HSPG2P98160 4391 aa17.13■□□□□ 0.33
PVT1-201ENST00000504719 IGHV3-38A0A0C4DH36 116 aa17.13■□□□□ 0.33
PVT1-201ENST00000504719 RAB14P61106 215 aa17.13■□□□□ 0.33
PVT1-201ENST00000504719 ZNF56Q15929 161 aa17.13■□□□□ 0.33
PVT1-201ENST00000504719 FAM74A3Q4VXF1 159 aa17.13■□□□□ 0.33
PVT1-201ENST00000504719 C10orf126Q8N4M7 172 aa17.13■□□□□ 0.33
PVT1-201ENST00000504719 SMDT1Q9H4I9 107 aa17.13■□□□□ 0.33
PVT1-201ENST00000504719 SMIM17P0DL12 118 aa17.12■□□□□ 0.33
PVT1-201ENST00000504719 LINC00694P0DN24 101 aa17.12■□□□□ 0.33
PVT1-201ENST00000504719 RAB4BP61018 213 aa17.12■□□□□ 0.33
PVT1-201ENST00000504719 PCLOQ9Y6V0 5065 aa17.12■□□□□ 0.33
PVT1-201ENST00000504719 TRAV8-6A0A0B4J262 113 aa17.11■□□□□ 0.33
PVT1-201ENST00000504719 CTRLP40313 264 aa17.11■□□□□ 0.33
PVT1-201ENST00000504719 TMEM241Q24JQ0 296 aa17.11■□□□□ 0.33
PVT1-201ENST00000504719 LINC01556Q5JQF7 62 aa17.11■□□□□ 0.33
PVT1-201ENST00000504719 LELP1Q5T871 98 aa17.11■□□□□ 0.33
PVT1-201ENST00000504719 GTSF1LQ9H1H1 148 aa17.11■□□□□ 0.33
PVT1-201ENST00000504719 KIF25-AS1Q9Y6Z4 181 aa17.11■□□□□ 0.33
PVT1-201ENST00000504719 OR10J3Q5JRS4 329 aa17.1■□□□□ 0.33
PVT1-201ENST00000504719 GTSF1Q8WW33 167 aa17.1■□□□□ 0.33
PVT1-201ENST00000504719 TRBV10-1A0A0K0K1A3 114 aa17.09■□□□□ 0.33
PVT1-201ENST00000504719 F5H697 171 aa17.09■□□□□ 0.33
PVT1-201ENST00000504719 EREGO14944 169 aa17.09■□□□□ 0.33
PVT1-201ENST00000504719 NTF3P20783 257 aa17.09■□□□□ 0.33
PVT1-201ENST00000504719 A8MWL6 223 aa17.08■□□□□ 0.32
PVT1-201ENST00000504719 WDR73Q6P4I2 378 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms