RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 KNCNA6PVL3 124 aa13.31□□□□□ -0.28
HMGXB3-201ENST00000502717 IGHV1-69P01742 117 aa13.31□□□□□ -0.28
HMGXB3-201ENST00000502717 UFSP1Q6NVU6 142 aa13.31□□□□□ -0.28
HMGXB3-201ENST00000502717 ICOSQ9Y6W8 199 aa13.31□□□□□ -0.28
HMGXB3-201ENST00000502717 MALP21145 153 aa13.3□□□□□ -0.28
HMGXB3-201ENST00000502717 INSP01308 110 aa13.3□□□□□ -0.28
HMGXB3-201ENST00000502717 SPRY2O43597 315 aa13.3□□□□□ -0.28
HMGXB3-201ENST00000502717 SPATA25Q9BR10 227 aa13.3□□□□□ -0.28
HMGXB3-201ENST00000502717 IGHV7-4-1A0A0J9YVY3 117 aa13.3□□□□□ -0.28
HMGXB3-201ENST00000502717 SUMO4Q6EEV6 95 aa13.3□□□□□ -0.28
HMGXB3-201ENST00000502717 TRAV13-2A0A0B4J235 113 aa13.29□□□□□ -0.28
HMGXB3-201ENST00000502717 H3BT86 120 aa13.29□□□□□ -0.28
HMGXB3-201ENST00000502717 TCL1BO95988 128 aa13.29□□□□□ -0.28
HMGXB3-201ENST00000502717 ZNF80P51504 273 aaPredicted RBP13.29□□□□□ -0.28
HMGXB3-201ENST00000502717 C6orf226Q5I0X4 101 aa13.29□□□□□ -0.28
HMGXB3-201ENST00000502717 PLCE1Q9P212 2302 aa13.29□□□□□ -0.28
HMGXB3-201ENST00000502717 MED14OSP0DP75 135 aa13.29□□□□□ -0.28
HMGXB3-201ENST00000502717 IGHV7-81A0A0B4J1V7 117 aa13.29□□□□□ -0.28
HMGXB3-201ENST00000502717 HERVK_113P63121 156 aa13.29□□□□□ -0.28
HMGXB3-201ENST00000502717 URB1-AS1Q96HZ7 61 aa13.29□□□□□ -0.28
HMGXB3-201ENST00000502717 TRAV12-2A0A075B6T6 113 aa13.28□□□□□ -0.28
HMGXB3-201ENST00000502717 EML5Q05BV3 1969 aa13.28□□□□□ -0.28
HMGXB3-201ENST00000502717 A0A0J9YXV3 536 aa13.28□□□□□ -0.28
HMGXB3-201ENST00000502717 F6UB75 175 aa13.28□□□□□ -0.28
HMGXB3-201ENST00000502717 ZMAT4Q9H898 229 aa13.28□□□□□ -0.28
HMGXB3-201ENST00000502717 BAALC-AS2P0C853 105 aa13.27□□□□□ -0.28
HMGXB3-201ENST00000502717 CRIP1P50238 77 aa13.27□□□□□ -0.29
HMGXB3-201ENST00000502717 LAMTOR3Q9UHA4 124 aa13.27□□□□□ -0.29
HMGXB3-201ENST00000502717 VWC2LB2RUY7 222 aa13.27□□□□□ -0.29
HMGXB3-201ENST00000502717 PSCAO43653 123 aa13.27□□□□□ -0.29
HMGXB3-201ENST00000502717 JPT2Q9H910 190 aa13.27□□□□□ -0.29
HMGXB3-201ENST00000502717 IGLV2-11P01706 119 aa13.26□□□□□ -0.29
HMGXB3-201ENST00000502717 HCFC1P51610 2035 aa13.26□□□□□ -0.29
HMGXB3-201ENST00000502717 CHD8Q9HCK8 2581 aa13.26□□□□□ -0.29
HMGXB3-201ENST00000502717 DEFB131AP59861 70 aa13.26□□□□□ -0.29
HMGXB3-201ENST00000502717 MAPKAPK5-AS1Q8N8E1 139 aa13.26□□□□□ -0.29
HMGXB3-201ENST00000502717 SYNJ2BPP57105 145 aa13.25□□□□□ -0.29
HMGXB3-201ENST00000502717 RPL39P62891 51 aaKnown RBP13.25□□□□□ -0.29
HMGXB3-201ENST00000502717 CCDC168Q8NDH2 2452 aa13.25□□□□□ -0.29
HMGXB3-201ENST00000502717 NDUFV3P56181 108 aaKnown RBP13.25□□□□□ -0.29
HMGXB3-201ENST00000502717 C16orf54Q6UWD8 224 aa13.25□□□□□ -0.29
HMGXB3-201ENST00000502717 FAM236AA0A1B0GUQ0 79 aa13.25□□□□□ -0.29
HMGXB3-201ENST00000502717 FAM236BA0A1B0GV22 79 aa13.25□□□□□ -0.29
HMGXB3-201ENST00000502717 FANCD2OSQ96PS1 177 aa13.25□□□□□ -0.29
HMGXB3-201ENST00000502717 H3BUA1 57 aa13.24□□□□□ -0.29
HMGXB3-201ENST00000502717 IGHV3-53P01767 116 aa13.24□□□□□ -0.29
HMGXB3-201ENST00000502717 RPL35AP18077 110 aaKnown RBP13.24□□□□□ -0.29
HMGXB3-201ENST00000502717 RUSC1-AS1Q66K80 236 aa13.24□□□□□ -0.29
HMGXB3-201ENST00000502717 RNASE13Q5GAN3 156 aaKnown RBP13.23□□□□□ -0.29
HMGXB3-201ENST00000502717 UBL5Q9BZL1 73 aa13.23□□□□□ -0.29
HMGXB3-201ENST00000502717 NEXN-AS1Q8NBZ9 246 aa13.23□□□□□ -0.29
HMGXB3-201ENST00000502717 A0A0B4J2C4 111 aa13.23□□□□□ -0.29
HMGXB3-201ENST00000502717 ANKHD1Q8IWZ3 2542 aaKnown RBP13.23□□□□□ -0.29
HMGXB3-201ENST00000502717 Q8N1Y9 231 aa13.22□□□□□ -0.29
HMGXB3-201ENST00000502717 IGHV3-38A0A0C4DH36 116 aa13.22□□□□□ -0.29
HMGXB3-201ENST00000502717 HOXB4P17483 251 aaPredicted RBP13.22□□□□□ -0.29
HMGXB3-201ENST00000502717 SEM1Q6ZVN7 128 aa13.22□□□□□ -0.29
HMGXB3-201ENST00000502717 RNF185Q96GF1 192 aa13.21□□□□□ -0.29
HMGXB3-201ENST00000502717 Q9H8V8 135 aa13.21□□□□□ -0.29
HMGXB3-201ENST00000502717 ATOX1O00244 68 aa13.21□□□□□ -0.29
HMGXB3-201ENST00000502717 ZNRF2Q8NHG8 242 aa13.21□□□□□ -0.29
HMGXB3-201ENST00000502717 IGHV3-16A0A0C4DH30 117 aa13.21□□□□□ -0.3
HMGXB3-201ENST00000502717 KIAA1549Q9HCM3 1950 aa13.2□□□□□ -0.3
HMGXB3-201ENST00000502717 SLC25A29Q8N8R3 303 aa13.2□□□□□ -0.3
HMGXB3-201ENST00000502717 Q8N9W7 124 aa13.2□□□□□ -0.3
HMGXB3-201ENST00000502717 CPAMD8Q8IZJ3 1885 aa13.2□□□□□ -0.3
HMGXB3-201ENST00000502717 LINC01619G3V211 115 aa13.19□□□□□ -0.3
HMGXB3-201ENST00000502717 MRPL23Q16540 153 aaKnown RBP13.19□□□□□ -0.3
HMGXB3-201ENST00000502717 CENPVL3A0A0U1RRI6 287 aa13.19□□□□□ -0.3
HMGXB3-201ENST00000502717 J3KT08 172 aa13.19□□□□□ -0.3
HMGXB3-201ENST00000502717 CFAP126Q5VTH2 177 aa13.19□□□□□ -0.3
HMGXB3-201ENST00000502717 CRYGBP07316 175 aa13.19□□□□□ -0.3
HMGXB3-201ENST00000502717 HERV-K104P63124 156 aa13.19□□□□□ -0.3
HMGXB3-201ENST00000502717 APOC4P55056 127 aa13.18□□□□□ -0.3
HMGXB3-201ENST00000502717 UBE2E2Q96LR5 201 aa13.18□□□□□ -0.3
HMGXB3-201ENST00000502717 LGALS9O00182 355 aa13.18□□□□□ -0.3
HMGXB3-201ENST00000502717 PFN2P35080 140 aa13.17□□□□□ -0.3
HMGXB3-201ENST00000502717 SS18Q15532 418 aa13.17□□□□□ -0.3
HMGXB3-201ENST00000502717 A0A0J9YY99 117 aa13.17□□□□□ -0.3
HMGXB3-201ENST00000502717 TMEM243Q9BU79 118 aa13.17□□□□□ -0.3
HMGXB3-201ENST00000502717 NAV2Q8IVL1 2488 aa13.17□□□□□ -0.3
HMGXB3-201ENST00000502717 DYSFO75923 2080 aa13.16□□□□□ -0.3
HMGXB3-201ENST00000502717 PLXNB1O43157 2135 aa13.16□□□□□ -0.3
HMGXB3-201ENST00000502717 ATP5G1P05496 136 aa13.16□□□□□ -0.3
HMGXB3-201ENST00000502717 RPL32P62910 135 aaKnown RBP13.16□□□□□ -0.3
HMGXB3-201ENST00000502717 CEP192Q8TEP8 1941 aa13.16□□□□□ -0.3
HMGXB3-201ENST00000502717 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.15□□□□□ -0.3
HMGXB3-201ENST00000502717 IGKV2-29A2NJV5 120 aaPredicted RBP13.15□□□□□ -0.3
HMGXB3-201ENST00000502717 PRR14LQ5THK1 2151 aa13.15□□□□□ -0.3
HMGXB3-201ENST00000502717 CLEC2BQ92478 149 aa13.15□□□□□ -0.3
HMGXB3-201ENST00000502717 NAV3Q8IVL0 2385 aa13.15□□□□□ -0.3
HMGXB3-201ENST00000502717 C20orf203Q8NBC4 194 aa13.15□□□□□ -0.3
HMGXB3-201ENST00000502717 WISP2O76076 250 aa13.14□□□□□ -0.31
HMGXB3-201ENST00000502717 ELANEP08246 267 aa13.14□□□□□ -0.31
HMGXB3-201ENST00000502717 LINC00643Q86TS7 51 aa13.14□□□□□ -0.31
HMGXB3-201ENST00000502717 CLUHP3Q96NS8 147 aa13.14□□□□□ -0.31
HMGXB3-201ENST00000502717 IGHV1-58A0A0C4DH39 117 aa13.13□□□□□ -0.31
HMGXB3-201ENST00000502717 RBMY1FQ15415 496 aaKnown RBP13.13□□□□□ -0.31
HMGXB3-201ENST00000502717 XCL2Q9UBD3 114 aa13.13□□□□□ -0.31
HMGXB3-201ENST00000502717 H0YGX0 51 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms