RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 LINC01551Q86U37 167 aa15.46■□□□□ 0.07
CDKN2A-208ENST00000498124 OR4C5Q8NGB2 326 aa15.46■□□□□ 0.07
CDKN2A-208ENST00000498124 LINC00315P59091 139 aa15.45■□□□□ 0.06
CDKN2A-208ENST00000498124 SLAQ13239 276 aa15.45■□□□□ 0.06
CDKN2A-208ENST00000498124 FAM231DQ6ZW35 169 aa15.45■□□□□ 0.06
CDKN2A-208ENST00000498124 RNASE7Q9H1E1 156 aaKnown RBP15.45■□□□□ 0.06
CDKN2A-208ENST00000498124 ZFP82Q8N141 532 aa15.44■□□□□ 0.06
CDKN2A-208ENST00000498124 MAPKAPK5-AS1Q8N8E1 139 aa15.44■□□□□ 0.06
CDKN2A-208ENST00000498124 RPP21Q9H633 154 aaKnown RBP15.44■□□□□ 0.06
CDKN2A-208ENST00000498124 NAT8Q9UHE5 227 aa15.44■□□□□ 0.06
CDKN2A-208ENST00000498124 RS1O15537 224 aa15.43■□□□□ 0.06
CDKN2A-208ENST00000498124 SNAI2O43623 268 aa15.43■□□□□ 0.06
CDKN2A-208ENST00000498124 CIDEAO60543 219 aa15.43■□□□□ 0.06
CDKN2A-208ENST00000498124 OR5AL1P0C617 328 aa15.43■□□□□ 0.06
CDKN2A-208ENST00000498124 ZNF479Q96JC4 524 aa15.43■□□□□ 0.06
CDKN2A-208ENST00000498124 SSBP4Q9BWG4 385 aaPredicted RBP15.43■□□□□ 0.06
CDKN2A-208ENST00000498124 TRGV4A0A0C4DH28 118 aa15.42■□□□□ 0.06
CDKN2A-208ENST00000498124 A8MWV9 139 aa15.42■□□□□ 0.06
CDKN2A-208ENST00000498124 PAX4O43316 350 aa15.42■□□□□ 0.06
CDKN2A-208ENST00000498124 SFTA3P0C7M3 94 aa15.42■□□□□ 0.06
CDKN2A-208ENST00000498124 ERVFC1-1P60608 527 aa15.42■□□□□ 0.06
CDKN2A-208ENST00000498124 FHL2Q14192 279 aa15.42■□□□□ 0.06
CDKN2A-208ENST00000498124 DMRTA1Q5VZB9 504 aa15.42■□□□□ 0.06
CDKN2A-208ENST00000498124 M0R381 172 aa15.41■□□□□ 0.06
CDKN2A-208ENST00000498124 GATCO43716 136 aaKnown RBP15.41■□□□□ 0.06
CDKN2A-208ENST00000498124 NXPH4O95158 308 aa15.41■□□□□ 0.06
CDKN2A-208ENST00000498124 GZMBP10144 247 aa15.41■□□□□ 0.06
CDKN2A-208ENST00000498124 CRYBA4P53673 196 aa15.41■□□□□ 0.06
CDKN2A-208ENST00000498124 CFAP126Q5VTH2 177 aa15.41■□□□□ 0.06
CDKN2A-208ENST00000498124 FER1L6-AS1Q8NA97 138 aa15.41■□□□□ 0.06
CDKN2A-208ENST00000498124 PRO0255Q9UI72 69 aa15.41■□□□□ 0.06
CDKN2A-208ENST00000498124 ICOSQ9Y6W8 199 aa15.41■□□□□ 0.06
CDKN2A-208ENST00000498124 SIVA1O15304 175 aa15.4■□□□□ 0.06
CDKN2A-208ENST00000498124 IGLC6P0CF74 106 aa15.4■□□□□ 0.06
CDKN2A-208ENST00000498124 RPL23P62829 140 aaKnown RBP15.4■□□□□ 0.06
CDKN2A-208ENST00000498124 UQCC3Q6UW78 93 aa15.4■□□□□ 0.06
CDKN2A-208ENST00000498124 HHLA3Q9XRX5 114 aa15.4■□□□□ 0.06
CDKN2A-208ENST00000498124 ADIRFQ15847 76 aa15.39■□□□□ 0.05
CDKN2A-208ENST00000498124 CT83Q5H943 113 aa15.39■□□□□ 0.05
CDKN2A-208ENST00000498124 SPANXN1Q5VSR9 72 aa15.39■□□□□ 0.05
CDKN2A-208ENST00000498124 OR10AG1Q8NH19 301 aa15.39■□□□□ 0.05
CDKN2A-208ENST00000498124 TPPP3Q9BW30 176 aa15.39■□□□□ 0.05
CDKN2A-208ENST00000498124 OSTCQ9NRP0 149 aa15.39■□□□□ 0.05
CDKN2A-208ENST00000498124 F2Z2F3 143 aa15.38■□□□□ 0.05
CDKN2A-208ENST00000498124 Q8N1X5 172 aa15.38■□□□□ 0.05
CDKN2A-208ENST00000498124 C15orf54Q8N8G6 183 aa15.38■□□□□ 0.05
CDKN2A-208ENST00000498124 ISOC2Q96AB3 205 aa15.38■□□□□ 0.05
CDKN2A-208ENST00000498124 A8MWL6 223 aa15.37■□□□□ 0.05
CDKN2A-208ENST00000498124 LYPD5Q6UWN5 251 aa15.37■□□□□ 0.05
CDKN2A-208ENST00000498124 ZFP2Q6ZN57 461 aa15.37■□□□□ 0.05
CDKN2A-208ENST00000498124 SFRP2Q96HF1 295 aa15.37■□□□□ 0.05
CDKN2A-208ENST00000498124 FAT1Q14517 4588 aa15.36■□□□□ 0.05
CDKN2A-208ENST00000498124 RHODO00212 210 aa15.36■□□□□ 0.05
CDKN2A-208ENST00000498124 CACNG7P62955 275 aa15.36■□□□□ 0.05
CDKN2A-208ENST00000498124 MUC21A0A0G2JKD1 596 aa15.35■□□□□ 0.05
CDKN2A-208ENST00000498124 MUC21A0A140T8X8 626 aa15.35■□□□□ 0.05
CDKN2A-208ENST00000498124 LINC00862A6NCI5 91 aa15.35■□□□□ 0.05
CDKN2A-208ENST00000498124 GATA1P15976 413 aaPredicted RBP15.35■□□□□ 0.05
CDKN2A-208ENST00000498124 COMMD7Q86VX2 200 aa15.35■□□□□ 0.05
CDKN2A-208ENST00000498124 JPT2Q9H910 190 aa15.35■□□□□ 0.05
CDKN2A-208ENST00000498124 TNFRSF18Q9Y5U5 241 aa15.35■□□□□ 0.05
CDKN2A-208ENST00000498124 IGHV3-73A0A0B4J1V6 119 aa15.34■□□□□ 0.05
CDKN2A-208ENST00000498124 CTRLP40313 264 aa15.34■□□□□ 0.05
CDKN2A-208ENST00000498124 MRPL23Q16540 153 aaKnown RBP15.34■□□□□ 0.05
CDKN2A-208ENST00000498124 LYZL1Q6UWQ5 148 aa15.34■□□□□ 0.05
CDKN2A-208ENST00000498124 WDR73Q6P4I2 378 aa15.33■□□□□ 0.04
CDKN2A-208ENST00000498124 OR10G8Q8NGN5 311 aa15.33■□□□□ 0.04
CDKN2A-208ENST00000498124 SAMD10Q9BYL1 202 aa15.33■□□□□ 0.04
CDKN2A-208ENST00000498124 TRBV6-4A0A1B0GX49 114 aa15.32■□□□□ 0.04
CDKN2A-208ENST00000498124 K7EQD1 137 aa15.32■□□□□ 0.04
CDKN2A-208ENST00000498124 SSTP61278 116 aa15.32■□□□□ 0.04
CDKN2A-208ENST00000498124 FAM74A4Q5TZK3 123 aa15.32■□□□□ 0.04
CDKN2A-208ENST00000498124 UFSP1Q6NVU6 142 aa15.32■□□□□ 0.04
CDKN2A-208ENST00000498124 TSKUQ8WUA8 353 aa15.32■□□□□ 0.04
CDKN2A-208ENST00000498124 GTSF1Q8WW33 167 aa15.32■□□□□ 0.04
CDKN2A-208ENST00000498124 A0A087WWL8 130 aa15.31■□□□□ 0.04
CDKN2A-208ENST00000498124 CRYGDP07320 174 aa15.31■□□□□ 0.04
CDKN2A-208ENST00000498124 FUSP35637 526 aaKnown RBP eCLIP15.31■□□□□ 0.04
CDKN2A-208ENST00000498124 PNRC1Q12796 327 aaPredicted RBP15.31■□□□□ 0.04
CDKN2A-208ENST00000498124 RHOHQ15669 191 aa15.31■□□□□ 0.04
CDKN2A-208ENST00000498124 NEGR1Q7Z3B1 354 aa15.31■□□□□ 0.04
CDKN2A-208ENST00000498124 AP1S3Q96PC3 154 aa15.31■□□□□ 0.04
CDKN2A-208ENST00000498124 PRADC1Q9BSG0 188 aa15.31■□□□□ 0.04
CDKN2A-208ENST00000498124 GFRA4Q9GZZ7 299 aa15.31■□□□□ 0.04
CDKN2A-208ENST00000498124 V9GYV3 84 aa15.31■□□□□ 0.04
CDKN2A-208ENST00000498124 TMEM218A2RU14 115 aa15.3■□□□□ 0.04
CDKN2A-208ENST00000498124 FAM231BA6NCW3 169 aa15.3■□□□□ 0.04
CDKN2A-208ENST00000498124 GYPEP15421 78 aa15.3■□□□□ 0.04
CDKN2A-208ENST00000498124 WFDC10BQ8IUB3 73 aa15.3■□□□□ 0.04
CDKN2A-208ENST00000498124 SLC25A29Q8N8R3 303 aa15.3■□□□□ 0.04
CDKN2A-208ENST00000498124 CNFNQ9BYD5 112 aa15.3■□□□□ 0.04
CDKN2A-208ENST00000498124 SMIM17P0DL12 118 aa15.29■□□□□ 0.04
CDKN2A-208ENST00000498124 FOXA3P55318 350 aaPredicted RBP15.29■□□□□ 0.04
CDKN2A-208ENST00000498124 TRGC1P0CF51 173 aa15.28■□□□□ 0.04
CDKN2A-208ENST00000498124 SRIP30626 198 aa15.28■□□□□ 0.04
CDKN2A-208ENST00000498124 C14orf178Q8N769 122 aaPredicted RBP15.28■□□□□ 0.04
CDKN2A-208ENST00000498124 HERC1Q15751 4861 aa15.27■□□□□ 0.04
CDKN2A-208ENST00000498124 F8W036 122 aa15.27■□□□□ 0.04
CDKN2A-208ENST00000498124 DNAH10OSP0CZ25 163 aa15.27■□□□□ 0.04
CDKN2A-208ENST00000498124 NTF3P20783 257 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms