RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 AKAP14Q86UN6 197 aa0.16□□□□□ -2.38
CD46-218ENST00000496723 MMGT1Q8N4V1 131 aa0.16□□□□□ -2.38
CD46-218ENST00000496723 MYH8P13535 1937 aa0.16□□□□□ -2.38
CD46-218ENST00000496723 POLQO75417 2590 aa0.16□□□□□ -2.38
CD46-218ENST00000496723 PIEZO1Q92508 2521 aa0.16□□□□□ -2.38
CD46-218ENST00000496723 PTPRMP28827 1452 aa0.16□□□□□ -2.38
CD46-218ENST00000496723 MUC22E2RYF6 1773 aaPredicted RBP0.15□□□□□ -2.39
CD46-218ENST00000496723 IGSF10Q6WRI0 2623 aa0.15□□□□□ -2.39
CD46-218ENST00000496723 COX4I1P13073 169 aa0.15□□□□□ -2.39
CD46-218ENST00000496723 IFI27L1Q96BM0 104 aa0.15□□□□□ -2.39
CD46-218ENST00000496723 LSM2Q9Y333 95 aaKnown RBP0.15□□□□□ -2.39
CD46-218ENST00000496723 OVOS2A0A0J9YW53 1432 aa0.14□□□□□ -2.39
CD46-218ENST00000496723 OVOS2Q6IE36 1432 aa0.14□□□□□ -2.39
CD46-218ENST00000496723 TRBV20-1A0A075B6N2 111 aa0.14□□□□□ -2.39
CD46-218ENST00000496723 SSBP1Q04837 148 aaKnown RBP0.14□□□□□ -2.39
CD46-218ENST00000496723 FAM74A4Q5TZK3 123 aa0.14□□□□□ -2.39
CD46-218ENST00000496723 SPEF2Q9C093 1822 aa0.14□□□□□ -2.39
CD46-218ENST00000496723 ERCC6Q03468 1493 aa0.14□□□□□ -2.39
CD46-218ENST00000496723 SYNJ1O43426 1573 aa0.14□□□□□ -2.39
CD46-218ENST00000496723 MYH9P35579 1960 aaKnown RBP0.14□□□□□ -2.39
CD46-218ENST00000496723 ANK2Q01484 3957 aa0.13□□□□□ -2.39
CD46-218ENST00000496723 SPINK1P00995 79 aa0.13□□□□□ -2.39
CD46-218ENST00000496723 APODP05090 189 aa0.13□□□□□ -2.39
CD46-218ENST00000496723 CCL3L1P16619 93 aa0.13□□□□□ -2.39
CD46-218ENST00000496723 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.13□□□□□ -2.39
CD46-218ENST00000496723 SMIM11BQ8TCY0 68 aa0.13□□□□□ -2.39
CD46-218ENST00000496723 SAR1AQ9NR31 198 aa0.13□□□□□ -2.39
CD46-218ENST00000496723 SIPA1L3O60292 1781 aaPredicted RBP0.13□□□□□ -2.39
CD46-218ENST00000496723 CACNA1CQ13936 2221 aa0.13□□□□□ -2.39
CD46-218ENST00000496723 COX6A2Q02221 97 aa0.12□□□□□ -2.39
CD46-218ENST00000496723 SPCS2Q15005 226 aa0.12□□□□□ -2.39
CD46-218ENST00000496723 Q5BKY6 102 aa0.12□□□□□ -2.39
CD46-218ENST00000496723 SLC48A1Q6P1K1 146 aa0.12□□□□□ -2.39
CD46-218ENST00000496723 C4orf33Q8N1A6 199 aa0.12□□□□□ -2.39
CD46-218ENST00000496723 VSTM2AQ8TAG5 236 aa0.12□□□□□ -2.39
CD46-218ENST00000496723 TMEM242Q9NWH2 141 aa0.12□□□□□ -2.39
CD46-218ENST00000496723 MACF1Q9UPN3 7388 aaKnown RBP0.12□□□□□ -2.39
CD46-218ENST00000496723 CEP152O94986 1710 aa0.12□□□□□ -2.39
CD46-218ENST00000496723 DISP2A7MBM2 1401 aa0.12□□□□□ -2.39
CD46-218ENST00000496723 GVQW2A0A096LPI5 108 aaPredicted RBP0.11□□□□□ -2.39
CD46-218ENST00000496723 TRAV12-3A0A0B4J271 114 aa0.11□□□□□ -2.39
CD46-218ENST00000496723 J3QR89 54 aa0.11□□□□□ -2.39
CD46-218ENST00000496723 NPC2P61916 151 aa0.11□□□□□ -2.39
CD46-218ENST00000496723 SPANXN1Q5VSR9 72 aa0.11□□□□□ -2.39
CD46-218ENST00000496723 LINC01545Q5VT33 79 aa0.11□□□□□ -2.39
CD46-218ENST00000496723 COX7B2Q8TF08 81 aa0.11□□□□□ -2.39
CD46-218ENST00000496723 LZICQ8WZA0 190 aa0.11□□□□□ -2.39
CD46-218ENST00000496723 GSKIPQ9P0R6 139 aa0.11□□□□□ -2.39
CD46-218ENST00000496723 DMBT1Q9UGM3 2413 aaPredicted RBP0.11□□□□□ -2.39
CD46-218ENST00000496723 CELSR1Q9NYQ6 3014 aa0.1□□□□□ -2.39
CD46-218ENST00000496723 SYNE1Q8NF91 8797 aaKnown RBP0.1□□□□□ -2.39
CD46-218ENST00000496723 A0A087WTM6 91 aa0.1□□□□□ -2.39
CD46-218ENST00000496723 TRBV7-1A0A0A6YYK4 115 aa0.1□□□□□ -2.39
CD46-218ENST00000496723 CTAGE3PQ8IX95 158 aa0.1□□□□□ -2.39
CD46-218ENST00000496723 C20orf197Q8N268 126 aa0.1□□□□□ -2.39
CD46-218ENST00000496723 FAM213BQ8TBF2 198 aa0.1□□□□□ -2.39
CD46-218ENST00000496723 SCP2D1Q9UJQ7 156 aa0.1□□□□□ -2.39
CD46-218ENST00000496723 V9GYV3 84 aa0.1□□□□□ -2.39
CD46-218ENST00000496723 SSC5DA1L4H1 1573 aa0.1□□□□□ -2.39
CD46-218ENST00000496723 NWD2Q9ULI1 1742 aa0.1□□□□□ -2.39
CD46-218ENST00000496723 ARHGEF10O15013 1369 aa0.09□□□□□ -2.39
CD46-218ENST00000496723 UBR5O95071 2799 aaPredicted RBP0.09□□□□□ -2.39
CD46-218ENST00000496723 NCR2O95944 276 aa0.09□□□□□ -2.4
CD46-218ENST00000496723 NMBP08949 121 aa0.09□□□□□ -2.4
CD46-218ENST00000496723 CKS1BP61024 79 aa0.09□□□□□ -2.4
CD46-218ENST00000496723 HIST1H1AQ02539 215 aaPredicted RBP0.09□□□□□ -2.4
CD46-218ENST00000496723 RPL7L1Q6DKI1 246 aaKnown RBP0.09□□□□□ -2.4
CD46-218ENST00000496723 SMIM3Q9BZL3 60 aa0.09□□□□□ -2.4
CD46-218ENST00000496723 BATF3Q9NR55 127 aa0.09□□□□□ -2.4
CD46-218ENST00000496723 NDUFA12Q9UI09 145 aa0.09□□□□□ -2.4
CD46-218ENST00000496723 ADGRB1O14514 1584 aa0.09□□□□□ -2.4
CD46-218ENST00000496723 DAPK1P53355 1430 aa0.08□□□□□ -2.4
CD46-218ENST00000496723 FAM236AA0A1B0GUQ0 79 aa0.08□□□□□ -2.4
CD46-218ENST00000496723 FAM236BA0A1B0GV22 79 aa0.08□□□□□ -2.4
CD46-218ENST00000496723 M0R2Z0 102 aa0.08□□□□□ -2.4
CD46-218ENST00000496723 IGLC6P0CF74 106 aa0.08□□□□□ -2.4
CD46-218ENST00000496723 ACYP2P14621 99 aa0.08□□□□□ -2.4
CD46-218ENST00000496723 MIC13Q5XKP0 118 aa0.08□□□□□ -2.4
CD46-218ENST00000496723 PSMG3Q9BT73 122 aaPredicted RBP0.08□□□□□ -2.4
CD46-218ENST00000496723 PRG4Q92954 1404 aaPredicted RBP0.07□□□□□ -2.4
CD46-218ENST00000496723 HRNRQ86YZ3 2850 aaPredicted RBP0.07□□□□□ -2.4
CD46-218ENST00000496723 A6NIN4 97 aa0.07□□□□□ -2.4
CD46-218ENST00000496723 M0R129 80 aa0.07□□□□□ -2.4
CD46-218ENST00000496723 IFNA17P01571 189 aa0.07□□□□□ -2.4
CD46-218ENST00000496723 TSPAN19P0C672 248 aa0.07□□□□□ -2.4
CD46-218ENST00000496723 PIRTP0C851 137 aa0.07□□□□□ -2.4
CD46-218ENST00000496723 RPRMQ9NS64 109 aa0.07□□□□□ -2.4
CD46-218ENST00000496723 OTOGQ6ZRI0 2925 aa0.07□□□□□ -2.4
CD46-218ENST00000496723 FHAD1B1AJZ9 1412 aa0.06□□□□□ -2.4
CD46-218ENST00000496723 CELSR2Q9HCU4 2923 aa0.06□□□□□ -2.4
CD46-218ENST00000496723 TMEM14DPA8MWL7 114 aa0.06□□□□□ -2.4
CD46-218ENST00000496723 K7ERU9 68 aa0.06□□□□□ -2.4
CD46-218ENST00000496723 ARPC5O15511 151 aa0.06□□□□□ -2.4
CD46-218ENST00000496723 PIPP12273 146 aaPredicted RBP0.06□□□□□ -2.4
CD46-218ENST00000496723 Q96NJ1 140 aa0.06□□□□□ -2.4
CD46-218ENST00000496723 IFT172Q9UG01 1749 aa0.06□□□□□ -2.4
CD46-218ENST00000496723 TMEM2Q9UHN6 1383 aa0.06□□□□□ -2.4
CD46-218ENST00000496723 HIVEP3Q5T1R4 2406 aa0.05□□□□□ -2.4
CD46-218ENST00000496723 COL7A1Q02388 2944 aa0.05□□□□□ -2.4
CD46-218ENST00000496723 DOPEY2Q9Y3R5 2298 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms