RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 LELP1Q5T871 98 aa8.44□□□□□ -1.06
HSPG2-212ENST00000493940 GTSF1LQ9H1H1 148 aa8.44□□□□□ -1.06
HSPG2-212ENST00000493940 hCG_2014768A0A024R1R8 64 aa8.43□□□□□ -1.06
HSPG2-212ENST00000493940 TRAV9-2A0A087WT02 112 aa8.43□□□□□ -1.06
HSPG2-212ENST00000493940 M0R381 172 aa8.43□□□□□ -1.06
HSPG2-212ENST00000493940 KRTAP10-1P60331 282 aa8.43□□□□□ -1.06
HSPG2-212ENST00000493940 OR10J3Q5JRS4 329 aa8.43□□□□□ -1.06
HSPG2-212ENST00000493940 SH2D6Q7Z4S9 175 aa8.43□□□□□ -1.06
HSPG2-212ENST00000493940 BAGE2Q86Y30 109 aa8.43□□□□□ -1.06
HSPG2-212ENST00000493940 DNAJC30Q96LL9 226 aa8.43□□□□□ -1.06
HSPG2-212ENST00000493940 TCEAL7Q9BRU2 100 aa8.43□□□□□ -1.06
HSPG2-212ENST00000493940 PFDN1O60925 122 aa8.42□□□□□ -1.06
HSPG2-212ENST00000493940 TPT1P13693 172 aaKnown RBP8.42□□□□□ -1.06
HSPG2-212ENST00000493940 XGP55808 180 aa8.42□□□□□ -1.06
HSPG2-212ENST00000493940 FAM74A4Q5TZK3 123 aa8.42□□□□□ -1.06
HSPG2-212ENST00000493940 NFE4Q86UQ8 179 aa8.42□□□□□ -1.06
HSPG2-212ENST00000493940 TCTE3Q8IZS6 198 aa8.42□□□□□ -1.06
HSPG2-212ENST00000493940 OR10AG1Q8NH19 301 aa8.42□□□□□ -1.06
HSPG2-212ENST00000493940 GNG13Q9P2W3 67 aa8.42□□□□□ -1.06
HSPG2-212ENST00000493940 TRAV1-1A0A0B4J248 108 aa8.41□□□□□ -1.06
HSPG2-212ENST00000493940 RAB19A4D1S5 217 aa8.41□□□□□ -1.06
HSPG2-212ENST00000493940 RPL35P42766 123 aaKnown RBP8.41□□□□□ -1.06
HSPG2-212ENST00000493940 SULT1A2P50226 295 aa8.41□□□□□ -1.06
HSPG2-212ENST00000493940 ERVFC1-1P60608 527 aa8.41□□□□□ -1.06
HSPG2-212ENST00000493940 WFDC2Q14508 124 aa8.41□□□□□ -1.06
HSPG2-212ENST00000493940 DAZ4Q86SG3 579 aaKnown RBP8.41□□□□□ -1.06
HSPG2-212ENST00000493940 Q9HAA7 133 aa8.41□□□□□ -1.06
HSPG2-212ENST00000493940 DAZ3Q9NR90 486 aaKnown RBP8.41□□□□□ -1.06
HSPG2-212ENST00000493940 PGPEP1Q9NXJ5 209 aa8.41□□□□□ -1.06
HSPG2-212ENST00000493940 PHLDA3Q9Y5J5 127 aa8.41□□□□□ -1.06
HSPG2-212ENST00000493940 VPS13BQ7Z7G8 4022 aa8.4□□□□□ -1.06
HSPG2-212ENST00000493940 TRAV8-6A0A0B4J262 113 aa8.4□□□□□ -1.06
HSPG2-212ENST00000493940 K7EP13 123 aa8.4□□□□□ -1.06
HSPG2-212ENST00000493940 GZMBP10144 247 aa8.4□□□□□ -1.06
HSPG2-212ENST00000493940 SSTP61278 116 aa8.4□□□□□ -1.06
HSPG2-212ENST00000493940 PRR27Q6MZM9 219 aa8.4□□□□□ -1.06
HSPG2-212ENST00000493940 C11orf52Q96A22 123 aa8.4□□□□□ -1.06
HSPG2-212ENST00000493940 SSBP4Q9BWG4 385 aaPredicted RBP8.4□□□□□ -1.06
HSPG2-212ENST00000493940 TRBV20OR9-2A0A075B6H5 130 aa8.39□□□□□ -1.07
HSPG2-212ENST00000493940 A0A1B0GVG6 124 aa8.39□□□□□ -1.07
HSPG2-212ENST00000493940 SNAI2O43623 268 aa8.39□□□□□ -1.07
HSPG2-212ENST00000493940 C1QBP02746 253 aa8.39□□□□□ -1.07
HSPG2-212ENST00000493940 S100A9P06702 114 aaKnown RBP8.39□□□□□ -1.07
HSPG2-212ENST00000493940 EIF5AP63241 154 aaKnown RBP8.39□□□□□ -1.07
HSPG2-212ENST00000493940 C10orf126Q8N4M7 172 aa8.39□□□□□ -1.07
HSPG2-212ENST00000493940 SYT8Q8NBV8 401 aa8.39□□□□□ -1.07
HSPG2-212ENST00000493940 KIF25-AS1Q9Y6Z4 181 aa8.39□□□□□ -1.07
HSPG2-212ENST00000493940 RBFOX3A6NFN3 312 aa8.38□□□□□ -1.07
HSPG2-212ENST00000493940 ZFP82Q8N141 532 aa8.38□□□□□ -1.07
HSPG2-212ENST00000493940 C19orf71A6NCJ1 209 aa8.37□□□□□ -1.07
HSPG2-212ENST00000493940 RHODO00212 210 aa8.37□□□□□ -1.07
HSPG2-212ENST00000493940 CXCL1P09341 107 aa8.37□□□□□ -1.07
HSPG2-212ENST00000493940 UBE2D3P61077 147 aa8.37□□□□□ -1.07
HSPG2-212ENST00000493940 UBE2D2P62837 147 aa8.37□□□□□ -1.07
HSPG2-212ENST00000493940 HAMPP81172 84 aa8.37□□□□□ -1.07
HSPG2-212ENST00000493940 CENPWQ5EE01 88 aa8.37□□□□□ -1.07
HSPG2-212ENST00000493940 C9orf62Q8N4C0 152 aa8.37□□□□□ -1.07
HSPG2-212ENST00000493940 MANBALQ9NQG1 85 aa8.37□□□□□ -1.07
HSPG2-212ENST00000493940 RAB5CP51148 216 aa8.36□□□□□ -1.07
HSPG2-212ENST00000493940 SLC51BQ86UW2 128 aa8.36□□□□□ -1.07
HSPG2-212ENST00000493940 NIT1Q86X76 327 aa8.36□□□□□ -1.07
HSPG2-212ENST00000493940 NEXN-AS1Q8NBZ9 246 aa8.36□□□□□ -1.07
HSPG2-212ENST00000493940 EREGO14944 169 aa8.35□□□□□ -1.07
HSPG2-212ENST00000493940 LECT2O14960 151 aa8.35□□□□□ -1.07
HSPG2-212ENST00000493940 OR5AL1P0C617 328 aa8.35□□□□□ -1.07
HSPG2-212ENST00000493940 IGLC6P0CF74 106 aa8.35□□□□□ -1.07
HSPG2-212ENST00000493940 CDPF1Q6NVV7 123 aa8.35□□□□□ -1.07
HSPG2-212ENST00000493940 AKAP14Q86UN6 197 aa8.35□□□□□ -1.07
HSPG2-212ENST00000493940 FAM30AQ9NZY2 134 aa8.35□□□□□ -1.07
HSPG2-212ENST00000493940 TRBV7-3A0A075B6L6 115 aa8.34□□□□□ -1.07
HSPG2-212ENST00000493940 PSCAO43653 123 aa8.34□□□□□ -1.07
HSPG2-212ENST00000493940 RAB4BP61018 213 aa8.34□□□□□ -1.07
HSPG2-212ENST00000493940 MEF2BQ02080 365 aaPredicted RBP8.34□□□□□ -1.07
HSPG2-212ENST00000493940 NTM-AS1Q6ZSK4 140 aa8.34□□□□□ -1.07
HSPG2-212ENST00000493940 Q8N814 137 aa8.34□□□□□ -1.07
HSPG2-212ENST00000493940 OR10G8Q8NGN5 311 aa8.34□□□□□ -1.07
HSPG2-212ENST00000493940 TRBV10-1A0A0K0K1A3 114 aa8.33□□□□□ -1.08
HSPG2-212ENST00000493940 BCL2P10415 239 aa8.33□□□□□ -1.08
HSPG2-212ENST00000493940 GCSHP23434 173 aa8.33□□□□□ -1.08
HSPG2-212ENST00000493940 LAGE3Q14657 143 aa8.33□□□□□ -1.08
HSPG2-212ENST00000493940 ZNF56Q15929 161 aa8.33□□□□□ -1.08
HSPG2-212ENST00000493940 SPANXN1Q5VSR9 72 aa8.33□□□□□ -1.08
HSPG2-212ENST00000493940 OR2D3Q8NGH3 330 aa8.33□□□□□ -1.08
HSPG2-212ENST00000493940 MED9Q9NWA0 146 aa8.33□□□□□ -1.08
HSPG2-212ENST00000493940 BOLA1Q9Y3E2 137 aa8.33□□□□□ -1.08
HSPG2-212ENST00000493940 SRRM2Q9UQ35 2752 aaKnown RBP8.33□□□□□ -1.08
HSPG2-212ENST00000493940 A0A087WWC5 75 aa8.32□□□□□ -1.08
HSPG2-212ENST00000493940 K7EN84 100 aa8.32□□□□□ -1.08
HSPG2-212ENST00000493940 SMR3BP02814 79 aaPredicted RBP8.32□□□□□ -1.08
HSPG2-212ENST00000493940 RPL36AP83881 106 aaKnown RBP8.32□□□□□ -1.08
HSPG2-212ENST00000493940 EIF5AL1Q6IS14 154 aaKnown RBP8.32□□□□□ -1.08
HSPG2-212ENST00000493940 ALKAL2Q6UX46 152 aa8.32□□□□□ -1.08
HSPG2-212ENST00000493940 NUDT10Q8NFP7 164 aa8.32□□□□□ -1.08
HSPG2-212ENST00000493940 RPL36ALQ969Q0 106 aaKnown RBP8.32□□□□□ -1.08
HSPG2-212ENST00000493940 NUDT11Q96G61 164 aa8.32□□□□□ -1.08
HSPG2-212ENST00000493940 VAX2Q9UIW0 290 aa8.32□□□□□ -1.08
HSPG2-212ENST00000493940 KLK12Q9UKR0 248 aa8.32□□□□□ -1.08
HSPG2-212ENST00000493940 GNG4P50150 75 aa8.31□□□□□ -1.08
HSPG2-212ENST00000493940 NKX2-5P52952 324 aaPredicted RBP8.31□□□□□ -1.08
HSPG2-212ENST00000493940 OCC1Q8TAD7 63 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms