RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 EDA2RQ9HAV5 297 aa8.85□□□□□ -0.99
SNX17-208ENST00000493711 RS1O15537 224 aa8.84□□□□□ -0.99
SNX17-208ENST00000493711 NTF3P20783 257 aa8.84□□□□□ -0.99
SNX17-208ENST00000493711 TWIST1Q15672 202 aa8.84□□□□□ -0.99
SNX17-208ENST00000493711 ZFP2Q6ZN57 461 aa8.84□□□□□ -0.99
SNX17-208ENST00000493711 OR4C5Q8NGB2 326 aa8.84□□□□□ -0.99
SNX17-208ENST00000493711 KRTAP4-8Q9BYQ9 185 aa8.84□□□□□ -0.99
SNX17-208ENST00000493711 CELA1Q9UNI1 258 aa8.84□□□□□ -0.99
SNX17-208ENST00000493711 SMIM17P0DL12 118 aa8.83□□□□□ -1
SNX17-208ENST00000493711 SLAQ13239 276 aa8.83□□□□□ -1
SNX17-208ENST00000493711 C12orf74Q32Q52 190 aa8.83□□□□□ -1
SNX17-208ENST00000493711 FAM3BP58499 235 aaPredicted RBP8.82□□□□□ -1
SNX17-208ENST00000493711 CFAP126Q5VTH2 177 aa8.82□□□□□ -1
SNX17-208ENST00000493711 RASL11AQ6T310 242 aa8.82□□□□□ -1
SNX17-208ENST00000493711 SMCO4Q9NRQ5 59 aa8.82□□□□□ -1
SNX17-208ENST00000493711 TRAV10A0A0B4J240 114 aa8.81□□□□□ -1
SNX17-208ENST00000493711 MUC21A0A0G2JKD1 596 aa8.81□□□□□ -1
SNX17-208ENST00000493711 MUC21A0A140T8X8 626 aa8.81□□□□□ -1
SNX17-208ENST00000493711 ATP6V1G1O75348 118 aa8.81□□□□□ -1
SNX17-208ENST00000493711 NANOS2P60321 138 aaKnown RBP8.81□□□□□ -1
SNX17-208ENST00000493711 HBBP68871 147 aa8.81□□□□□ -1
SNX17-208ENST00000493711 COX19Q49B96 90 aa8.81□□□□□ -1
SNX17-208ENST00000493711 DPH3P1Q9H4G8 78 aa8.81□□□□□ -1
SNX17-208ENST00000493711 TENM3Q9P273 2699 aa8.81□□□□□ -1
SNX17-208ENST00000493711 FRZBQ92765 325 aa8.8□□□□□ -1
SNX17-208ENST00000493711 FAM210BQ96KR6 192 aa8.8□□□□□ -1
SNX17-208ENST00000493711 TMEM191AQ9H0A3 160 aa8.8□□□□□ -1
SNX17-208ENST00000493711 TRGV4A0A0C4DH28 118 aa8.79□□□□□ -1
SNX17-208ENST00000493711 A0A1B0GXF2 115 aa8.79□□□□□ -1
SNX17-208ENST00000493711 CRYGDP07320 174 aa8.79□□□□□ -1
SNX17-208ENST00000493711 SSTP61278 116 aa8.79□□□□□ -1
SNX17-208ENST00000493711 Q6ZTC4 211 aa8.79□□□□□ -1
SNX17-208ENST00000493711 C14orf178Q8N769 122 aaPredicted RBP8.79□□□□□ -1
SNX17-208ENST00000493711 ZNF479Q96JC4 524 aa8.79□□□□□ -1
SNX17-208ENST00000493711 WWC2-AS2Q96NR7 200 aa8.79□□□□□ -1
SNX17-208ENST00000493711 MSRB1Q9NZV6 116 aa8.79□□□□□ -1
SNX17-208ENST00000493711 URGCP-MRPS24S4R325 110 aa8.79□□□□□ -1
SNX17-208ENST00000493711 DEFB131BA0A096LNP1 70 aa8.78□□□□□ -1
SNX17-208ENST00000493711 F5H768 121 aa8.78□□□□□ -1
SNX17-208ENST00000493711 H7C1H1 209 aa8.78□□□□□ -1
SNX17-208ENST00000493711 CAMPP49913 170 aa8.78□□□□□ -1
SNX17-208ENST00000493711 RAB4BP61018 213 aa8.78□□□□□ -1
SNX17-208ENST00000493711 FAM74A4Q5TZK3 123 aa8.78□□□□□ -1
SNX17-208ENST00000493711 UFSP1Q6NVU6 142 aa8.78□□□□□ -1
SNX17-208ENST00000493711 MRPL54Q6P161 138 aaKnown RBP8.78□□□□□ -1
SNX17-208ENST00000493711 ATRAIDQ6UW56 229 aa8.78□□□□□ -1
SNX17-208ENST00000493711 POM121L12Q8N7R1 296 aa8.78□□□□□ -1
SNX17-208ENST00000493711 PRO0255Q9UI72 69 aa8.78□□□□□ -1
SNX17-208ENST00000493711 KIF25-AS1Q9Y6Z4 181 aa8.78□□□□□ -1
SNX17-208ENST00000493711 TRBV24-1A0A075B6N3 115 aa8.77□□□□□ -1.01
SNX17-208ENST00000493711 A0A087WWL8 130 aa8.77□□□□□ -1.01
SNX17-208ENST00000493711 TRBV6-4A0A1B0GX49 114 aa8.77□□□□□ -1.01
SNX17-208ENST00000493711 NUPR2A6NF83 97 aa8.77□□□□□ -1.01
SNX17-208ENST00000493711 F5H697 171 aa8.77□□□□□ -1.01
SNX17-208ENST00000493711 H3BNG1 76 aa8.77□□□□□ -1.01
SNX17-208ENST00000493711 IGHV3-53P01767 116 aa8.77□□□□□ -1.01
SNX17-208ENST00000493711 HTN3P15516 51 aa8.77□□□□□ -1.01
SNX17-208ENST00000493711 GATA1P15976 413 aaPredicted RBP8.77□□□□□ -1.01
SNX17-208ENST00000493711 EVI2AP22794 236 aa8.77□□□□□ -1.01
SNX17-208ENST00000493711 FHL2Q14192 279 aa8.77□□□□□ -1.01
SNX17-208ENST00000493711 GATD1Q8NB37 220 aa8.77□□□□□ -1.01
SNX17-208ENST00000493711 PHLDA1Q8WV24 401 aaPredicted RBP8.77□□□□□ -1.01
SNX17-208ENST00000493711 PRADC1Q9BSG0 188 aa8.77□□□□□ -1.01
SNX17-208ENST00000493711 JPT2Q9H910 190 aa8.77□□□□□ -1.01
SNX17-208ENST00000493711 HHLA3Q9XRX5 114 aa8.77□□□□□ -1.01
SNX17-208ENST00000493711 BIRC6Q9NR09 4857 aa8.77□□□□□ -1.01
SNX17-208ENST00000493711 EPPK1P58107 5090 aaKnown RBP8.76□□□□□ -1.01
SNX17-208ENST00000493711 MT-ND6P03923 174 aa8.76□□□□□ -1.01
SNX17-208ENST00000493711 ELOBQ15370 118 aa8.76□□□□□ -1.01
SNX17-208ENST00000493711 ZNF56Q15929 161 aa8.76□□□□□ -1.01
SNX17-208ENST00000493711 SAMD10Q9BYL1 202 aa8.76□□□□□ -1.01
SNX17-208ENST00000493711 KLK5Q9Y337 293 aaPredicted RBP8.76□□□□□ -1.01
SNX17-208ENST00000493711 STAB2Q8WWQ8 2551 aa8.76□□□□□ -1.01
SNX17-208ENST00000493711 TRBV10-1A0A0K0K1A3 114 aa8.75□□□□□ -1.01
SNX17-208ENST00000493711 PPP1R17O96001 155 aa8.75□□□□□ -1.01
SNX17-208ENST00000493711 MGPP08493 103 aa8.75□□□□□ -1.01
SNX17-208ENST00000493711 LINC00315P59091 139 aa8.75□□□□□ -1.01
SNX17-208ENST00000493711 RHOHQ15669 191 aa8.75□□□□□ -1.01
SNX17-208ENST00000493711 FAM104BQ5XKR9 115 aa8.75□□□□□ -1.01
SNX17-208ENST00000493711 CDPF1Q6NVV7 123 aa8.75□□□□□ -1.01
SNX17-208ENST00000493711 CEMP1Q6PRD7 247 aaPredicted RBP8.75□□□□□ -1.01
SNX17-208ENST00000493711 MUC7Q8TAX7 377 aa8.75□□□□□ -1.01
SNX17-208ENST00000493711 MRAP2Q96G30 205 aa8.75□□□□□ -1.01
SNX17-208ENST00000493711 GNB1LQ9BYB4 327 aa8.75□□□□□ -1.01
SNX17-208ENST00000493711 COL7A1Q02388 2944 aa8.75□□□□□ -1.01
SNX17-208ENST00000493711 IGHV3-73A0A0B4J1V6 119 aa8.74□□□□□ -1.01
SNX17-208ENST00000493711 PAX4O43316 350 aa8.74□□□□□ -1.01
SNX17-208ENST00000493711 HLA-DQA1P01909 254 aa8.74□□□□□ -1.01
SNX17-208ENST00000493711 PPBPP02775 128 aa8.74□□□□□ -1.01
SNX17-208ENST00000493711 HOXA5P20719 270 aa8.74□□□□□ -1.01
SNX17-208ENST00000493711 CRYBA4P53673 196 aa8.74□□□□□ -1.01
SNX17-208ENST00000493711 TCTAP57738 103 aa8.74□□□□□ -1.01
SNX17-208ENST00000493711 TMEM88Q6PEY1 159 aa8.74□□□□□ -1.01
SNX17-208ENST00000493711 SH2D6Q7Z4S9 175 aa8.74□□□□□ -1.01
SNX17-208ENST00000493711 CBLN2Q8IUK8 224 aa8.74□□□□□ -1.01
SNX17-208ENST00000493711 C15orf53Q8NAA6 179 aa8.74□□□□□ -1.01
SNX17-208ENST00000493711 K7EQD1 137 aa8.73□□□□□ -1.01
SNX17-208ENST00000493711 RAB4AP20338 218 aa8.73□□□□□ -1.01
SNX17-208ENST00000493711 SLC25A29Q8N8R3 303 aa8.73□□□□□ -1.01
SNX17-208ENST00000493711 YPEL4Q96NS1 127 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms