RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 JPT2Q9H910 190 aa10.11□□□□□ -0.79
SS18L1-205ENST00000492466 TRBV20OR9-2A0A075B6H5 130 aa10.1□□□□□ -0.79
SS18L1-205ENST00000492466 A0A087WWL8 130 aa10.1□□□□□ -0.79
SS18L1-205ENST00000492466 MUC21A0A0G2JKD1 596 aa10.1□□□□□ -0.79
SS18L1-205ENST00000492466 MUC21A0A140T8X8 626 aa10.1□□□□□ -0.79
SS18L1-205ENST00000492466 TRBV6-4A0A1B0GX49 114 aa10.1□□□□□ -0.79
SS18L1-205ENST00000492466 NXPH4O95158 308 aa10.1□□□□□ -0.79
SS18L1-205ENST00000492466 ZNF56Q15929 161 aa10.1□□□□□ -0.79
SS18L1-205ENST00000492466 TEX261Q6UWH6 196 aa10.1□□□□□ -0.79
SS18L1-205ENST00000492466 ZFP2Q6ZN57 461 aa10.1□□□□□ -0.79
SS18L1-205ENST00000492466 OR10AG1Q8NH19 301 aa10.1□□□□□ -0.79
SS18L1-205ENST00000492466 LYPD6BQ8NI32 183 aa10.1□□□□□ -0.79
SS18L1-205ENST00000492466 FAM210AQ96ND0 272 aa10.1□□□□□ -0.79
SS18L1-205ENST00000492466 Q9H8V8 135 aa10.1□□□□□ -0.79
SS18L1-205ENST00000492466 IGLV2-8P01709 118 aa10.09□□□□□ -0.79
SS18L1-205ENST00000492466 SMIM17P0DL12 118 aa10.09□□□□□ -0.79
SS18L1-205ENST00000492466 C6orf223Q8N319 242 aa10.09□□□□□ -0.79
SS18L1-205ENST00000492466 FER1L6-AS1Q8NA97 138 aa10.09□□□□□ -0.79
SS18L1-205ENST00000492466 SMIM7Q9BQ49 75 aa10.09□□□□□ -0.79
SS18L1-205ENST00000492466 UPK3BQ9BT76 320 aa10.09□□□□□ -0.79
SS18L1-205ENST00000492466 SIVA1O15304 175 aa10.08□□□□□ -0.8
SS18L1-205ENST00000492466 GZMBP10144 247 aa10.08□□□□□ -0.8
SS18L1-205ENST00000492466 SFRP2Q96HF1 295 aa10.08□□□□□ -0.8
SS18L1-205ENST00000492466 AP1S3Q96PC3 154 aa10.08□□□□□ -0.8
SS18L1-205ENST00000492466 SAMD10Q9BYL1 202 aa10.08□□□□□ -0.8
SS18L1-205ENST00000492466 SCRT2Q9NQ03 307 aa10.08□□□□□ -0.8
SS18L1-205ENST00000492466 GAGE12JA6NER3 117 aa10.07□□□□□ -0.8
SS18L1-205ENST00000492466 SNAI2O43623 268 aa10.07□□□□□ -0.8
SS18L1-205ENST00000492466 OR5AL1P0C617 328 aa10.07□□□□□ -0.8
SS18L1-205ENST00000492466 GAGE1Q13065 139 aa10.07□□□□□ -0.8
SS18L1-205ENST00000492466 GAGE4Q13068 117 aa10.07□□□□□ -0.8
SS18L1-205ENST00000492466 GAGE5Q13069 117 aa10.07□□□□□ -0.8
SS18L1-205ENST00000492466 GAGE13Q4V321 117 aa10.07□□□□□ -0.8
SS18L1-205ENST00000492466 LYPD5Q6UWN5 251 aa10.07□□□□□ -0.8
SS18L1-205ENST00000492466 KRTAP1-5Q9BYS1 174 aa10.07□□□□□ -0.8
SS18L1-205ENST00000492466 RPP21Q9H633 154 aaKnown RBP10.07□□□□□ -0.8
SS18L1-205ENST00000492466 C19orf71A6NCJ1 209 aa10.06□□□□□ -0.8
SS18L1-205ENST00000492466 ZNF727A8MUV8 499 aa10.06□□□□□ -0.8
SS18L1-205ENST00000492466 F5H697 171 aa10.06□□□□□ -0.8
SS18L1-205ENST00000492466 CDK2AP2O75956 126 aa10.06□□□□□ -0.8
SS18L1-205ENST00000492466 ATP6V0E2Q8NHE4 81 aa10.06□□□□□ -0.8
SS18L1-205ENST00000492466 RNASE7Q9H1E1 156 aaKnown RBP10.06□□□□□ -0.8
SS18L1-205ENST00000492466 TRAV8-6A0A0B4J262 113 aa10.05□□□□□ -0.8
SS18L1-205ENST00000492466 C16orf90A8MZG2 172 aa10.05□□□□□ -0.8
SS18L1-205ENST00000492466 MGPP08493 103 aa10.05□□□□□ -0.8
SS18L1-205ENST00000492466 RAB14P61106 215 aa10.05□□□□□ -0.8
SS18L1-205ENST00000492466 CACNG7P62955 275 aa10.05□□□□□ -0.8
SS18L1-205ENST00000492466 OR10J3Q5JRS4 329 aa10.05□□□□□ -0.8
SS18L1-205ENST00000492466 C14orf178Q8N769 122 aaPredicted RBP10.05□□□□□ -0.8
SS18L1-205ENST00000492466 NUDT10Q8NFP7 164 aa10.05□□□□□ -0.8
SS18L1-205ENST00000492466 OCC1Q8TAD7 63 aa10.05□□□□□ -0.8
SS18L1-205ENST00000492466 NUDT11Q96G61 164 aa10.05□□□□□ -0.8
SS18L1-205ENST00000492466 LY96Q9Y6Y9 160 aa10.05□□□□□ -0.8
SS18L1-205ENST00000492466 HERC1Q15751 4861 aa10.05□□□□□ -0.8
SS18L1-205ENST00000492466 FAT1Q14517 4588 aa10.04□□□□□ -0.8
SS18L1-205ENST00000492466 A0A1W2PPQ1 181 aa10.04□□□□□ -0.8
SS18L1-205ENST00000492466 K7EN84 100 aa10.04□□□□□ -0.8
SS18L1-205ENST00000492466 GATCO43716 136 aaKnown RBP10.04□□□□□ -0.8
SS18L1-205ENST00000492466 ERVFC1-1P60608 527 aa10.04□□□□□ -0.8
SS18L1-205ENST00000492466 PEA15Q15121 130 aa10.04□□□□□ -0.8
SS18L1-205ENST00000492466 Q6ZSN1 163 aa10.04□□□□□ -0.8
SS18L1-205ENST00000492466 WFDC10BQ8IUB3 73 aa10.04□□□□□ -0.8
SS18L1-205ENST00000492466 TRAV9-2A0A087WT02 112 aa10.03□□□□□ -0.8
SS18L1-205ENST00000492466 F2Z2F3 143 aa10.03□□□□□ -0.8
SS18L1-205ENST00000492466 SRP19P09132 144 aaKnown RBP10.03□□□□□ -0.8
SS18L1-205ENST00000492466 TRGC1P0CF51 173 aa10.03□□□□□ -0.8
SS18L1-205ENST00000492466 EVI2AP22794 236 aa10.03□□□□□ -0.8
SS18L1-205ENST00000492466 RPL36AP83881 106 aaKnown RBP10.03□□□□□ -0.8
SS18L1-205ENST00000492466 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.03□□□□□ -0.8
SS18L1-205ENST00000492466 RPL36ALQ969Q0 106 aaKnown RBP10.03□□□□□ -0.8
SS18L1-205ENST00000492466 SSBP4Q9BWG4 385 aaPredicted RBP10.03□□□□□ -0.8
SS18L1-205ENST00000492466 NDUFS6O75380 124 aaKnown RBP10.02□□□□□ -0.81
SS18L1-205ENST00000492466 CRYGDP07320 174 aa10.02□□□□□ -0.81
SS18L1-205ENST00000492466 IGLC6P0CF74 106 aa10.02□□□□□ -0.81
SS18L1-205ENST00000492466 UFSP1Q6NVU6 142 aa10.02□□□□□ -0.81
SS18L1-205ENST00000492466 LYZL1Q6UWQ5 148 aa10.02□□□□□ -0.81
SS18L1-205ENST00000492466 BORCS7Q96B45 105 aa10.02□□□□□ -0.81
SS18L1-205ENST00000492466 GTSF1LQ9H1H1 148 aa10.02□□□□□ -0.81
SS18L1-205ENST00000492466 RAB4BP61018 213 aa10.01□□□□□ -0.81
SS18L1-205ENST00000492466 C15orf54Q8N8G6 183 aa10.01□□□□□ -0.81
SS18L1-205ENST00000492466 TRBV10-1A0A0K0K1A3 114 aa10□□□□□ -0.81
SS18L1-205ENST00000492466 TIRAPP58753 221 aa10□□□□□ -0.81
SS18L1-205ENST00000492466 KRTAP10-2P60368 255 aa10□□□□□ -0.81
SS18L1-205ENST00000492466 ADIRFQ15847 76 aa10□□□□□ -0.81
SS18L1-205ENST00000492466 FAM74A3Q4VXF1 159 aa10□□□□□ -0.81
SS18L1-205ENST00000492466 LELP1Q5T871 98 aa10□□□□□ -0.81
SS18L1-205ENST00000492466 SMIM15Q7Z3B0 74 aa10□□□□□ -0.81
SS18L1-205ENST00000492466 IGHV3-38A0A0C4DH36 116 aa9.99□□□□□ -0.81
SS18L1-205ENST00000492466 A8MWL6 223 aa9.99□□□□□ -0.81
SS18L1-205ENST00000492466 H7C1H1 209 aa9.99□□□□□ -0.81
SS18L1-205ENST00000492466 CTRLP40313 264 aa9.99□□□□□ -0.81
SS18L1-205ENST00000492466 TWIST1Q15672 202 aa9.99□□□□□ -0.81
SS18L1-205ENST00000492466 FAM231DQ6ZW35 169 aa9.99□□□□□ -0.81
SS18L1-205ENST00000492466 SPATA12Q7Z6I5 190 aa9.99□□□□□ -0.81
SS18L1-205ENST00000492466 LINC01551Q86U37 167 aa9.99□□□□□ -0.81
SS18L1-205ENST00000492466 C10orf126Q8N4M7 172 aa9.99□□□□□ -0.81
SS18L1-205ENST00000492466 MAPKAPK5-AS1Q8N8E1 139 aa9.99□□□□□ -0.81
SS18L1-205ENST00000492466 A0A087WWC5 75 aa9.98□□□□□ -0.81
SS18L1-205ENST00000492466 LINC00315P59091 139 aa9.98□□□□□ -0.81
SS18L1-205ENST00000492466 TMEM241Q24JQ0 296 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms