RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 CST9LQ9H4G1 147 aa17.03■□□□□ 0.32
USF3-203ENST00000491165 AP1S3Q96PC3 154 aa17.02■□□□□ 0.32
USF3-203ENST00000491165 IGLV2-18A0A075B6J9 118 aa17.02■□□□□ 0.31
USF3-203ENST00000491165 C9orf118A6NHY6 69 aa17.01■□□□□ 0.31
USF3-203ENST00000491165 C16orf92Q96LL3 132 aa17.01■□□□□ 0.31
USF3-203ENST00000491165 DAZ1Q9NQZ3 744 aaKnown RBP17■□□□□ 0.31
USF3-203ENST00000491165 UFC1Q9Y3C8 167 aa17■□□□□ 0.31
USF3-203ENST00000491165 LGALS9O00182 355 aa17■□□□□ 0.31
USF3-203ENST00000491165 ATP5LO75964 103 aa17■□□□□ 0.31
USF3-203ENST00000491165 KIR3DS1Q14943 382 aa17■□□□□ 0.31
USF3-203ENST00000491165 SMPXQ9UHP9 88 aa17■□□□□ 0.31
USF3-203ENST00000491165 HHLA3Q9XRX5 114 aa17■□□□□ 0.31
USF3-203ENST00000491165 IGHV4-4A0A075B6R2 117 aa16.99■□□□□ 0.31
USF3-203ENST00000491165 GAGE10A6NGK3 116 aa16.99■□□□□ 0.31
USF3-203ENST00000491165 PRSS47A8MTI9 375 aa16.99■□□□□ 0.31
USF3-203ENST00000491165 IGKCP01834 107 aa16.99■□□□□ 0.31
USF3-203ENST00000491165 GAGE12BA1L429 117 aa16.99■□□□□ 0.31
USF3-203ENST00000491165 SPANXN1Q5VSR9 72 aa16.99■□□□□ 0.31
USF3-203ENST00000491165 NRACQ8N912 160 aa16.99■□□□□ 0.31
USF3-203ENST00000491165 C21orf62-AS1Q17RA5 79 aa16.98■□□□□ 0.31
USF3-203ENST00000491165 OCIAD2Q56VL3 154 aa16.98■□□□□ 0.31
USF3-203ENST00000491165 GLMPQ8WWB7 406 aa16.98■□□□□ 0.31
USF3-203ENST00000491165 SMIM17P0DL12 118 aa16.97■□□□□ 0.31
USF3-203ENST00000491165 RNF151Q2KHN1 245 aa16.97■□□□□ 0.31
USF3-203ENST00000491165 GTF2H5Q6ZYL4 71 aa16.97■□□□□ 0.31
USF3-203ENST00000491165 LENEPQ9Y5L5 61 aa16.97■□□□□ 0.31
USF3-203ENST00000491165 TRAV26-2A0A0B4J265 109 aa16.97■□□□□ 0.31
USF3-203ENST00000491165 DPM2O94777 84 aa16.97■□□□□ 0.31
USF3-203ENST00000491165 LAGE3Q14657 143 aa16.97■□□□□ 0.31
USF3-203ENST00000491165 Q6ZQT7 251 aa16.97■□□□□ 0.31
USF3-203ENST00000491165 IGKV2D-26A0A0A0MRZ7 120 aa16.96■□□□□ 0.31
USF3-203ENST00000491165 LINC00482Q8N8I6 264 aa16.96■□□□□ 0.31
USF3-203ENST00000491165 H3BUT2 72 aa16.96■□□□□ 0.3
USF3-203ENST00000491165 K7EMT4 169 aa16.96■□□□□ 0.3
USF3-203ENST00000491165 PF4P02776 101 aa16.96■□□□□ 0.3
USF3-203ENST00000491165 SHISA2Q6UWI4 295 aa16.96■□□□□ 0.3
USF3-203ENST00000491165 DNHD1Q96M86 4753 aa16.95■□□□□ 0.3
USF3-203ENST00000491165 H3BVH4 76 aa16.95■□□□□ 0.3
USF3-203ENST00000491165 PRR9Q5T870 116 aa16.95■□□□□ 0.3
USF3-203ENST00000491165 UFSP1Q6NVU6 142 aa16.95■□□□□ 0.3
USF3-203ENST00000491165 HIGD1BQ9P298 99 aa16.95■□□□□ 0.3
USF3-203ENST00000491165 NOTCH3Q9UM47 2321 aa16.95■□□□□ 0.3
USF3-203ENST00000491165 OVOL1O14753 267 aa16.94■□□□□ 0.3
USF3-203ENST00000491165 C20orf173Q96LM9 149 aa16.94■□□□□ 0.3
USF3-203ENST00000491165 RHPN1-AS1Q9BWJ2 59 aa16.94■□□□□ 0.3
USF3-203ENST00000491165 RIPPLY3P57055 190 aa16.93■□□□□ 0.3
USF3-203ENST00000491165 MRAP2Q96G30 205 aa16.93■□□□□ 0.3
USF3-203ENST00000491165 ZC2HC1BQ5TFG8 222 aa16.93■□□□□ 0.3
USF3-203ENST00000491165 RAB37Q96AX2 223 aa16.93■□□□□ 0.3
USF3-203ENST00000491165 K7EP34 96 aa16.92■□□□□ 0.3
USF3-203ENST00000491165 GTSCR1Q86UQ5 136 aa16.92■□□□□ 0.3
USF3-203ENST00000491165 LINC00477Q96M19 166 aa16.92■□□□□ 0.3
USF3-203ENST00000491165 HLA-DRB4P13762 266 aa16.91■□□□□ 0.3
USF3-203ENST00000491165 OR10J6PQ8NGY7 276 aa16.91■□□□□ 0.3
USF3-203ENST00000491165 NAA38Q9BRA0 125 aaKnown RBP16.91■□□□□ 0.3
USF3-203ENST00000491165 CHAC1Q9BUX1 264 aa16.91■□□□□ 0.3
USF3-203ENST00000491165 TTTY13Q9BZ97 58 aa16.91■□□□□ 0.3
USF3-203ENST00000491165 PEMTQ9UBM1 199 aa16.91■□□□□ 0.3
USF3-203ENST00000491165 HLA-DRB4X5D2U9 266 aa16.91■□□□□ 0.3
USF3-203ENST00000491165 MRPL35Q9NZE8 188 aaKnown RBP16.9■□□□□ 0.3
USF3-203ENST00000491165 GCSHP23434 173 aa16.9■□□□□ 0.3
USF3-203ENST00000491165 TRAV21A0A0B4J279 112 aa16.89■□□□□ 0.29
USF3-203ENST00000491165 J3KRW8 73 aa16.89■□□□□ 0.29
USF3-203ENST00000491165 ZFAND2AQ8N6M9 145 aa16.89■□□□□ 0.29
USF3-203ENST00000491165 SMIM2Q9BVW6 85 aa16.89■□□□□ 0.29
USF3-203ENST00000491165 A0A087WX48 190 aa16.88■□□□□ 0.29
USF3-203ENST00000491165 K7ERU9 68 aa16.88■□□□□ 0.29
USF3-203ENST00000491165 SMIM13P0DJ93 91 aa16.88■□□□□ 0.29
USF3-203ENST00000491165 TRBV25-1A0A075B6N4 114 aa16.88■□□□□ 0.29
USF3-203ENST00000491165 A0A1W2PPM0 123 aa16.88■□□□□ 0.29
USF3-203ENST00000491165 SOCS3O14543 225 aa16.88■□□□□ 0.29
USF3-203ENST00000491165 VPS25Q9BRG1 176 aa16.88■□□□□ 0.29
USF3-203ENST00000491165 IGKV3-7A0A075B6H7 116 aa16.87■□□□□ 0.29
USF3-203ENST00000491165 FXYD2P54710 66 aa16.87■□□□□ 0.29
USF3-203ENST00000491165 M0R381 172 aa16.86■□□□□ 0.29
USF3-203ENST00000491165 S100A4P26447 101 aaKnown RBP16.86■□□□□ 0.29
USF3-203ENST00000491165 PLNP26678 52 aa16.86■□□□□ 0.29
USF3-203ENST00000491165 SORL1Q92673 2214 aa16.85■□□□□ 0.29
USF3-203ENST00000491165 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.85■□□□□ 0.29
USF3-203ENST00000491165 ASIPP42127 132 aa16.85■□□□□ 0.29
USF3-203ENST00000491165 SAP30O75446 220 aa16.85■□□□□ 0.29
USF3-203ENST00000491165 ORMDL2Q53FV1 153 aa16.85■□□□□ 0.29
USF3-203ENST00000491165 OR5A1Q8NGJ0 315 aa16.85■□□□□ 0.29
USF3-203ENST00000491165 SPCS1Q9Y6A9 102 aa16.85■□□□□ 0.29
USF3-203ENST00000491165 DPH3P1Q9H4G8 78 aa16.84■□□□□ 0.29
USF3-203ENST00000491165 FABP2P12104 132 aa16.84■□□□□ 0.29
USF3-203ENST00000491165 SUMO2P61956 95 aaKnown RBP16.84■□□□□ 0.29
USF3-203ENST00000491165 DEFB114Q30KQ6 69 aa16.84■□□□□ 0.29
USF3-203ENST00000491165 PHLDA3Q9Y5J5 127 aa16.84■□□□□ 0.29
USF3-203ENST00000491165 TRAV12-1A0A0B4J245 112 aa16.83■□□□□ 0.28
USF3-203ENST00000491165 RPL11P62913 178 aaKnown RBP16.83■□□□□ 0.28
USF3-203ENST00000491165 CD300EQ496F6 205 aaPredicted RBP16.83■□□□□ 0.28
USF3-203ENST00000491165 SAMD5Q5TGI4 173 aa16.83■□□□□ 0.28
USF3-203ENST00000491165 TMEM61Q8N0U2 210 aa16.83■□□□□ 0.28
USF3-203ENST00000491165 RASL10AQ92737 203 aa16.83■□□□□ 0.28
USF3-203ENST00000491165 C20orf78Q9BR46 151 aa16.83■□□□□ 0.28
USF3-203ENST00000491165 MED14OSP0DP75 135 aa16.82■□□□□ 0.28
USF3-203ENST00000491165 ANXA2RQ3ZCQ2 193 aa16.82■□□□□ 0.28
USF3-203ENST00000491165 WFDC9Q8NEX5 89 aa16.82■□□□□ 0.28
USF3-203ENST00000491165 FAM19A4Q96LR4 140 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 204.8 ms