RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 C1QBP02746 253 aa16.85■□□□□ 0.29
HMGN1-217ENST00000489072 SULT1A2P50226 295 aa16.85■□□□□ 0.29
HMGN1-217ENST00000489072 EIF5AL1Q6IS14 154 aaKnown RBP16.85■□□□□ 0.29
HMGN1-217ENST00000489072 C10orf126Q8N4M7 172 aa16.85■□□□□ 0.29
HMGN1-217ENST00000489072 A0A087WWL8 130 aa16.84■□□□□ 0.29
HMGN1-217ENST00000489072 RHODO00212 210 aa16.84■□□□□ 0.29
HMGN1-217ENST00000489072 FAM74A4Q5TZK3 123 aa16.84■□□□□ 0.29
HMGN1-217ENST00000489072 C11orf52Q96A22 123 aa16.84■□□□□ 0.29
HMGN1-217ENST00000489072 DERL1Q9BUN8 251 aa16.84■□□□□ 0.29
HMGN1-217ENST00000489072 CDK2AP2O75956 126 aa16.83■□□□□ 0.28
HMGN1-217ENST00000489072 RPL35P42766 123 aaKnown RBP16.83■□□□□ 0.28
HMGN1-217ENST00000489072 ERVFC1-1P60608 527 aa16.83■□□□□ 0.28
HMGN1-217ENST00000489072 ZFP82Q8N141 532 aa16.83■□□□□ 0.28
HMGN1-217ENST00000489072 FUSP35637 526 aaKnown RBP eCLIP16.82■□□□□ 0.28
HMGN1-217ENST00000489072 PRR27Q6MZM9 219 aa16.81■□□□□ 0.28
HMGN1-217ENST00000489072 SLC51BQ86UW2 128 aa16.81■□□□□ 0.28
HMGN1-217ENST00000489072 ABCA13Q86UQ4 5058 aa16.81■□□□□ 0.28
HMGN1-217ENST00000489072 A0A087WTM6 91 aa16.8■□□□□ 0.28
HMGN1-217ENST00000489072 IGHV3-30P01768 117 aa16.8■□□□□ 0.28
HMGN1-217ENST00000489072 IGHV3-33P01772 117 aa16.8■□□□□ 0.28
HMGN1-217ENST00000489072 CXCL1P09341 107 aa16.8■□□□□ 0.28
HMGN1-217ENST00000489072 IGHV3-30-3P0DP02 117 aa16.8■□□□□ 0.28
HMGN1-217ENST00000489072 IGHV3-30-5P0DP03 117 aa16.8■□□□□ 0.28
HMGN1-217ENST00000489072 OR10AG1Q8NH19 301 aa16.8■□□□□ 0.28
HMGN1-217ENST00000489072 IBA57-AS1B1ANH7 110 aa16.79■□□□□ 0.28
HMGN1-217ENST00000489072 hCG_2014768A0A024R1R8 64 aa16.78■□□□□ 0.28
HMGN1-217ENST00000489072 EREGO14944 169 aa16.78■□□□□ 0.28
HMGN1-217ENST00000489072 Q8N3U1 123 aa16.78■□□□□ 0.28
HMGN1-217ENST00000489072 BOLA1Q9Y3E2 137 aa16.78■□□□□ 0.28
HMGN1-217ENST00000489072 TEX46H3BTG2 121 aa16.77■□□□□ 0.28
HMGN1-217ENST00000489072 SNAI2O43623 268 aa16.77■□□□□ 0.28
HMGN1-217ENST00000489072 CENPWQ5EE01 88 aa16.77■□□□□ 0.28
HMGN1-217ENST00000489072 AKAP14Q86UN6 197 aa16.77■□□□□ 0.28
HMGN1-217ENST00000489072 SSBP4Q9BWG4 385 aaPredicted RBP16.77■□□□□ 0.28
HMGN1-217ENST00000489072 KRTAP4-5Q9BYR2 181 aa16.77■□□□□ 0.28
HMGN1-217ENST00000489072 IGLV2-8P01709 118 aa16.76■□□□□ 0.27
HMGN1-217ENST00000489072 C9orf62Q8N4C0 152 aa16.76■□□□□ 0.27
HMGN1-217ENST00000489072 PGPEP1Q9NXJ5 209 aa16.76■□□□□ 0.27
HMGN1-217ENST00000489072 MUC21A0A0G2JKD1 596 aa16.75■□□□□ 0.27
HMGN1-217ENST00000489072 MUC21A0A140T8X8 626 aa16.75■□□□□ 0.27
HMGN1-217ENST00000489072 MEF2BQ02080 365 aaPredicted RBP16.75■□□□□ 0.27
HMGN1-217ENST00000489072 Q9HAA7 133 aa16.75■□□□□ 0.27
HMGN1-217ENST00000489072 RAB19A4D1S5 217 aa16.74■□□□□ 0.27
HMGN1-217ENST00000489072 OR5AL1P0C617 328 aa16.74■□□□□ 0.27
HMGN1-217ENST00000489072 BCL2P10415 239 aa16.73■□□□□ 0.27
HMGN1-217ENST00000489072 A0A087WWC5 75 aa16.72■□□□□ 0.27
HMGN1-217ENST00000489072 IFNA1P01562 189 aa16.72■□□□□ 0.27
HMGN1-217ENST00000489072 TRBV20OR9-2A0A075B6H5 130 aa16.71■□□□□ 0.27
HMGN1-217ENST00000489072 TRBV10-1A0A0K0K1A3 114 aa16.71■□□□□ 0.27
HMGN1-217ENST00000489072 PDE6DO43924 150 aa16.71■□□□□ 0.27
HMGN1-217ENST00000489072 CDPF1Q6NVV7 123 aa16.71■□□□□ 0.27
HMGN1-217ENST00000489072 C19orf71A6NCJ1 209 aa16.7■□□□□ 0.26
HMGN1-217ENST00000489072 LRCOL1A6NCL2 159 aa16.7■□□□□ 0.26
HMGN1-217ENST00000489072 PSCAO43653 123 aa16.7■□□□□ 0.26
HMGN1-217ENST00000489072 GZMBP10144 247 aa16.7■□□□□ 0.26
HMGN1-217ENST00000489072 GNG4P50150 75 aa16.7■□□□□ 0.26
HMGN1-217ENST00000489072 SSTP61278 116 aa16.7■□□□□ 0.26
HMGN1-217ENST00000489072 LAGE3Q14657 143 aa16.7■□□□□ 0.26
HMGN1-217ENST00000489072 SPANXN1Q5VSR9 72 aa16.7■□□□□ 0.26
HMGN1-217ENST00000489072 MAPKAPK5-AS1Q8N8E1 139 aa16.7■□□□□ 0.26
HMGN1-217ENST00000489072 MED9Q9NWA0 146 aa16.7■□□□□ 0.26
HMGN1-217ENST00000489072 RAB4BP61018 213 aa16.69■□□□□ 0.26
HMGN1-217ENST00000489072 UBE2D3P61077 147 aa16.69■□□□□ 0.26
HMGN1-217ENST00000489072 UBE2D2P62837 147 aa16.69■□□□□ 0.26
HMGN1-217ENST00000489072 RPL36AP83881 106 aaKnown RBP16.69■□□□□ 0.26
HMGN1-217ENST00000489072 ZNF56Q15929 161 aa16.69■□□□□ 0.26
HMGN1-217ENST00000489072 DAZ4Q86SG3 579 aaKnown RBP16.69■□□□□ 0.26
HMGN1-217ENST00000489072 RPL36ALQ969Q0 106 aaKnown RBP16.69■□□□□ 0.26
HMGN1-217ENST00000489072 DAZ3Q9NR90 486 aaKnown RBP16.69■□□□□ 0.26
HMGN1-217ENST00000489072 VAX2Q9UIW0 290 aa16.69■□□□□ 0.26
HMGN1-217ENST00000489072 OR10G8Q8NGN5 311 aa16.68■□□□□ 0.26
HMGN1-217ENST00000489072 SMIM12Q96EX1 92 aa16.68■□□□□ 0.26
HMGN1-217ENST00000489072 TRBV7-3A0A075B6L6 115 aa16.67■□□□□ 0.26
HMGN1-217ENST00000489072 RBFOX3A6NFN3 312 aa16.67■□□□□ 0.26
HMGN1-217ENST00000489072 IGLC6P0CF74 106 aa16.67■□□□□ 0.26
HMGN1-217ENST00000489072 OR2D3Q8NGH3 330 aa16.67■□□□□ 0.26
HMGN1-217ENST00000489072 DAZAP1Q96EP5 407 aaKnown RBP16.67■□□□□ 0.26
HMGN1-217ENST00000489072 KIF25-AS1Q9Y6Z4 181 aa16.67■□□□□ 0.26
HMGN1-217ENST00000489072 NIT1Q86X76 327 aa16.66■□□□□ 0.26
HMGN1-217ENST00000489072 NEXN-AS1Q8NBZ9 246 aa16.66■□□□□ 0.26
HMGN1-217ENST00000489072 KRTAP10-1P60331 282 aa16.65■□□□□ 0.26
HMGN1-217ENST00000489072 ALKAL2Q6UX46 152 aa16.65■□□□□ 0.26
HMGN1-217ENST00000489072 RPS20P60866 119 aaKnown RBP16.64■□□□□ 0.25
HMGN1-217ENST00000489072 FER1L6-AS1Q8NA97 138 aa16.64■□□□□ 0.25
HMGN1-217ENST00000489072 TPPP3Q9BW30 176 aa16.64■□□□□ 0.25
HMGN1-217ENST00000489072 TAGLN2P37802 199 aaKnown RBP16.63■□□□□ 0.25
HMGN1-217ENST00000489072 AP1S3Q96PC3 154 aa16.63■□□□□ 0.25
HMGN1-217ENST00000489072 F5H697 171 aa16.62■□□□□ 0.25
HMGN1-217ENST00000489072 P01737 135 aa16.62■□□□□ 0.25
HMGN1-217ENST00000489072 Q8N1X5 172 aa16.62■□□□□ 0.25
HMGN1-217ENST00000489072 TRAV8-3A0A0A6YYJ7 113 aa16.61■□□□□ 0.25
HMGN1-217ENST00000489072 TM2D2Q9BX73 214 aa16.61■□□□□ 0.25
HMGN1-217ENST00000489072 SMIM17P0DL12 118 aa16.6■□□□□ 0.25
HMGN1-217ENST00000489072 WFDC2Q14508 124 aa16.6■□□□□ 0.25
HMGN1-217ENST00000489072 Q8N814 137 aa16.6■□□□□ 0.25
HMGN1-217ENST00000489072 DNAJC30Q96LL9 226 aa16.6■□□□□ 0.25
HMGN1-217ENST00000489072 URGCP-MRPS24S4R325 110 aa16.6■□□□□ 0.25
HMGN1-217ENST00000489072 A0A1B0GVG6 124 aa16.59■□□□□ 0.25
HMGN1-217ENST00000489072 NKX2-5P52952 324 aaPredicted RBP16.59■□□□□ 0.25
HMGN1-217ENST00000489072 BLOC1S1P78537 153 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms