RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 VPREB3Q9UKI3 123 aa2.1□□□□□ -2.07
CALD1-221ENST00000489019 LENEPQ9Y5L5 61 aa2.1□□□□□ -2.07
CALD1-221ENST00000489019 AKAP13Q12802 2813 aa2.1□□□□□ -2.07
CALD1-221ENST00000489019 TNCP24821 2201 aa2.1□□□□□ -2.07
CALD1-221ENST00000489019 APC2O95996 2303 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 PTPRZ1P23471 2315 aaPredicted RBP2.09□□□□□ -2.07
CALD1-221ENST00000489019 ACACAQ13085 2346 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 PLCE1Q9P212 2302 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 DMXL1Q9Y485 3027 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 SPENQ96T58 3664 aaKnown RBP2.09□□□□□ -2.07
CALD1-221ENST00000489019 LOC400499M0QZD8 3231 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 PKDREJQ9NTG1 2253 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 TRAV26-2A0A0B4J265 109 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 C2orf70A6NJV1 201 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 M0R381 172 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 SOCS3O14543 225 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 SNAI2O43623 268 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 HBDP02042 147 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 LGALS1P09382 135 aaKnown RBP2.09□□□□□ -2.07
CALD1-221ENST00000489019 ZNF688P0C7X2 276 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 PSMB8P28062 276 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 CDKN1BP46527 198 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 SYNJ2BPP57105 145 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 DEFB1P60022 68 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 MRPL23Q16540 153 aaKnown RBP2.09□□□□□ -2.07
CALD1-221ENST00000489019 PSMG4Q5JS54 123 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 PRR9Q5T870 116 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 C10orf99Q6UWK7 81 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 LINC00173Q6ZV60 143 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 MTURNQ8N3F0 131 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 Q8N976 141 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 OR2K2Q8NGT1 345 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 MYOZ3Q8TDC0 251 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 DYNLRB2Q8TF09 96 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 IFI27L1Q96BM0 104 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 RNF185Q96GF1 192 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 UBE2E2Q96LR5 201 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 PMCHL2Q9BQD1 86 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 C2orf88Q9BSF0 95 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 SNHG12Q9BXW3 62 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 MS4A6AQ9H2W1 248 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 DPH3P1Q9H4G8 78 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 NXT2Q9NPJ8 142 aaKnown RBP2.09□□□□□ -2.07
CALD1-221ENST00000489019 LAMTOR2Q9Y2Q5 125 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 PHLDA3Q9Y5J5 127 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 U3KQK5 164 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 PTPRQQ9UMZ3 2332 aa2.09□□□□□ -2.07
CALD1-221ENST00000489019 PLXNB1O43157 2135 aa2.09□□□□□ -2.08
CALD1-221ENST00000489019 ZFHX4Q86UP3 3567 aa2.09□□□□□ -2.08
CALD1-221ENST00000489019 BSNQ9UPA5 3926 aa2.09□□□□□ -2.08
CALD1-221ENST00000489019 POLEQ07864 2286 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 PCNX1Q96RV3 2341 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 MUC6Q6W4X9 2439 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 TTC28Q96AY4 2481 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 A0A096LNT2 108 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 TRAV12-3A0A0B4J271 114 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 TRAV25A0A0B4J276 109 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 TRBV7-9A0A0J9YWB2 115 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 TEX48A0A1B0GUV7 120 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 C7orf71A4D174 169 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 LINC01619G3V211 115 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 J3QKU1 62 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 K7EQD1 137 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 LGALS9O00182 355 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 TCAPO15273 167 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 RS1O15537 224 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 GNRH2O43555 120 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 DUSP14O95147 198 aaKnown RBP2.08□□□□□ -2.08
CALD1-221ENST00000489019 CD7P09564 240 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 IGLC3P0DOY3 106 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 IGLL1P15814 213 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 ZNF25P17030 456 aaPredicted RBP2.08□□□□□ -2.08
CALD1-221ENST00000489019 FCER1GP30273 86 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 TSPOP30536 169 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 HINT1P49773 126 aaPredicted RBP2.08□□□□□ -2.08
CALD1-221ENST00000489019 TCTAP57738 103 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 NUTF2P61970 127 aaKnown RBP2.08□□□□□ -2.08
CALD1-221ENST00000489019 LAGE3Q14657 143 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 LGALS9BQ3B8N2 356 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 COL5A1-AS1Q5SY13 56 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 LGALS9CQ6DKI2 356 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 SLC25A34Q6PIV7 304 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 Q6ZQT7 251 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 SPATA12Q7Z6I5 190 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 MRPL52Q86TS9 123 aaKnown RBP2.08□□□□□ -2.08
CALD1-221ENST00000489019 ZFAND2AQ8N6M9 145 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 Q8N8P6 123 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 KLHL30-AS1Q8NEE0 82 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 OR11H1Q8NG94 326 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 OR1N2Q8NGR9 330 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 MRAP2Q96G30 205 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 C18orf15Q96N68 181 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 AP1S3Q96PC3 154 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 ZNF702PQ9H963 129 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 ST20Q9HBF5 79 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 ZMAT5Q9UDW3 170 aaKnown RBP2.08□□□□□ -2.08
CALD1-221ENST00000489019 GOLT1BQ9Y3E0 138 aa2.08□□□□□ -2.08
CALD1-221ENST00000489019 ABCA4P78363 2273 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 GVINP1Q7Z2Y8 2422 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 CEP250Q9BV73 2442 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms