RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 MSRB1Q9NZV6 116 aa14.17□□□□□ -0.14
CCM2-216ENST00000488727 SSTP61278 116 aa14.16□□□□□ -0.14
CCM2-216ENST00000488727 CACNG7P62955 275 aa14.16□□□□□ -0.14
CCM2-216ENST00000488727 SBSPONQ8IVN8 264 aa14.16□□□□□ -0.14
CCM2-216ENST00000488727 ATOH7Q8N100 152 aa14.16□□□□□ -0.14
CCM2-216ENST00000488727 NPYP01303 97 aa14.15□□□□□ -0.14
CCM2-216ENST00000488727 OR8A1Q8NGG7 326 aa14.15□□□□□ -0.14
CCM2-216ENST00000488727 B9D2Q9BPU9 175 aa14.15□□□□□ -0.14
CCM2-216ENST00000488727 A0A096LNJ9 63 aa14.15□□□□□ -0.14
CCM2-216ENST00000488727 A0A1B0GV90 55 aa14.15□□□□□ -0.14
CCM2-216ENST00000488727 LINC01546A6NGU7 62 aa14.15□□□□□ -0.14
CCM2-216ENST00000488727 TRAV21A0A0B4J279 112 aa14.14□□□□□ -0.15
CCM2-216ENST00000488727 SMKR1H3BMG3 65 aa14.13□□□□□ -0.15
CCM2-216ENST00000488727 IGKV3-20P01619 116 aa14.13□□□□□ -0.15
CCM2-216ENST00000488727 LINC01545Q5VT33 79 aa14.13□□□□□ -0.15
CCM2-216ENST00000488727 LOC389332A0A1B0GUA5 103 aa14.12□□□□□ -0.15
CCM2-216ENST00000488727 MAJINQ3KP22 176 aa14.12□□□□□ -0.15
CCM2-216ENST00000488727 MAP1LC3AQ9H492 121 aa14.12□□□□□ -0.15
CCM2-216ENST00000488727 A8MTW9 85 aa14.12□□□□□ -0.15
CCM2-216ENST00000488727 NCR2O95944 276 aa14.12□□□□□ -0.15
CCM2-216ENST00000488727 MED14OSP0DP75 135 aa14.12□□□□□ -0.15
CCM2-216ENST00000488727 ST20Q9HBF5 79 aa14.12□□□□□ -0.15
CCM2-216ENST00000488727 APOC4P55056 127 aa14.11□□□□□ -0.15
CCM2-216ENST00000488727 SMIM15Q7Z3B0 74 aa14.11□□□□□ -0.15
CCM2-216ENST00000488727 KIR2DL5BQ8NHK3 375 aa14.11□□□□□ -0.15
CCM2-216ENST00000488727 CLUHP3Q96NS8 147 aa14.11□□□□□ -0.15
CCM2-216ENST00000488727 CSTL1Q9H114 145 aa14.11□□□□□ -0.15
CCM2-216ENST00000488727 DNAH9Q9NYC9 4486 aa14.1□□□□□ -0.15
CCM2-216ENST00000488727 HBDP02042 147 aa14.1□□□□□ -0.15
CCM2-216ENST00000488727 GIG44P09565 113 aaPredicted RBP14.1□□□□□ -0.15
CCM2-216ENST00000488727 NUTF2P61970 127 aaKnown RBP14.1□□□□□ -0.15
CCM2-216ENST00000488727 AMTNQ6UX39 209 aa14.1□□□□□ -0.15
CCM2-216ENST00000488727 Q6ZQT7 251 aa14.1□□□□□ -0.15
CCM2-216ENST00000488727 COL7A1Q02388 2944 aa14.1□□□□□ -0.15
CCM2-216ENST00000488727 DUSP14O95147 198 aaKnown RBP14.1□□□□□ -0.15
CCM2-216ENST00000488727 HNRNPA3P51991 378 aaKnown RBP14.1□□□□□ -0.15
CCM2-216ENST00000488727 Q6ZN92 141 aa14.1□□□□□ -0.15
CCM2-216ENST00000488727 NXT2Q9NPJ8 142 aaKnown RBP14.1□□□□□ -0.15
CCM2-216ENST00000488727 NBEAL2Q6ZNJ1 2754 aa14.09□□□□□ -0.15
CCM2-216ENST00000488727 PRSS47A8MTI9 375 aa14.09□□□□□ -0.15
CCM2-216ENST00000488727 TNFRSF6BO95407 300 aa14.09□□□□□ -0.15
CCM2-216ENST00000488727 H3BVH4 76 aa14.08□□□□□ -0.16
CCM2-216ENST00000488727 FXYD7P58549 80 aa14.08□□□□□ -0.16
CCM2-216ENST00000488727 SPANXN1Q5VSR9 72 aa14.08□□□□□ -0.16
CCM2-216ENST00000488727 MORN3Q6PF18 240 aaPredicted RBP14.08□□□□□ -0.16
CCM2-216ENST00000488727 TM2D3Q9BRN9 247 aa14.08□□□□□ -0.16
CCM2-216ENST00000488727 MRPS16Q9Y3D3 137 aaKnown RBP14.08□□□□□ -0.16
CCM2-216ENST00000488727 KLLNB2CW77 178 aa14.07□□□□□ -0.16
CCM2-216ENST00000488727 EVI2AP22794 236 aa14.07□□□□□ -0.16
CCM2-216ENST00000488727 TSPOP30536 169 aa14.07□□□□□ -0.16
CCM2-216ENST00000488727 ASIPP42127 132 aa14.07□□□□□ -0.16
CCM2-216ENST00000488727 DEFB135Q30KP9 77 aa14.07□□□□□ -0.16
CCM2-216ENST00000488727 ODF3Q96PU9 254 aa14.07□□□□□ -0.16
CCM2-216ENST00000488727 RETNQ9HD89 108 aa14.07□□□□□ -0.16
CCM2-216ENST00000488727 SCRT2Q9NQ03 307 aa14.07□□□□□ -0.16
CCM2-216ENST00000488727 HSBP1L1C9JCN9 74 aa14.06□□□□□ -0.16
CCM2-216ENST00000488727 GAS8-AS1O95177 125 aa14.06□□□□□ -0.16
CCM2-216ENST00000488727 LGALS9BQ3B8N2 356 aa14.06□□□□□ -0.16
CCM2-216ENST00000488727 LGALS9CQ6DKI2 356 aa14.06□□□□□ -0.16
CCM2-216ENST00000488727 TENM3Q9P273 2699 aa14.06□□□□□ -0.16
CCM2-216ENST00000488727 ANXA2RQ3ZCQ2 193 aa14.05□□□□□ -0.16
CCM2-216ENST00000488727 LINC00469Q8N7U9 141 aa14.05□□□□□ -0.16
CCM2-216ENST00000488727 Q8N8P6 123 aa14.05□□□□□ -0.16
CCM2-216ENST00000488727 NRACQ8N912 160 aa14.05□□□□□ -0.16
CCM2-216ENST00000488727 MRAP2Q96G30 205 aa14.05□□□□□ -0.16
CCM2-216ENST00000488727 XCL2Q9UBD3 114 aa14.05□□□□□ -0.16
CCM2-216ENST00000488727 TIMM8BQ9Y5J9 83 aaPredicted RBP14.05□□□□□ -0.16
CCM2-216ENST00000488727 IGLV2-18A0A075B6J9 118 aa14.04□□□□□ -0.16
CCM2-216ENST00000488727 J3KRW8 73 aa14.04□□□□□ -0.16
CCM2-216ENST00000488727 RNASE4P34096 147 aaKnown RBP14.04□□□□□ -0.16
CCM2-216ENST00000488727 SPINK13Q1W4C9 94 aa14.04□□□□□ -0.16
CCM2-216ENST00000488727 hDV102S1A0JD36 115 aa14.04□□□□□ -0.16
CCM2-216ENST00000488727 CSNK1G2-AS1Q8NCQ2 148 aa14.04□□□□□ -0.16
CCM2-216ENST00000488727 HUWE1Q7Z6Z7 4374 aaKnown RBP14.04□□□□□ -0.16
CCM2-216ENST00000488727 FCER1GP30273 86 aa14.03□□□□□ -0.16
CCM2-216ENST00000488727 IFI27L1Q96BM0 104 aa14.03□□□□□ -0.16
CCM2-216ENST00000488727 SPATA25Q9BR10 227 aa14.03□□□□□ -0.16
CCM2-216ENST00000488727 OVOL2Q9BRP0 275 aa14.03□□□□□ -0.16
CCM2-216ENST00000488727 H0Y8G0 127 aa14.02□□□□□ -0.16
CCM2-216ENST00000488727 NXPH4O95158 308 aa14.02□□□□□ -0.16
CCM2-216ENST00000488727 GATA1P15976 413 aaPredicted RBP14.02□□□□□ -0.16
CCM2-216ENST00000488727 S100A4P26447 101 aaKnown RBP14.02□□□□□ -0.16
CCM2-216ENST00000488727 KIR3DS1Q14943 382 aa14.02□□□□□ -0.16
CCM2-216ENST00000488727 RNF183Q96D59 192 aa14.02□□□□□ -0.16
CCM2-216ENST00000488727 TGP01266 2768 aa14.02□□□□□ -0.17
CCM2-216ENST00000488727 NHLRC4P0CG21 123 aaPredicted RBP14.01□□□□□ -0.17
CCM2-216ENST00000488727 LEPP41159 167 aa14.01□□□□□ -0.17
CCM2-216ENST00000488727 C1QTNF4Q9BXJ3 329 aa14.01□□□□□ -0.17
CCM2-216ENST00000488727 TRAV12-2A0A075B6T6 113 aa14.01□□□□□ -0.17
CCM2-216ENST00000488727 DPH3P1Q9H4G8 78 aa14.01□□□□□ -0.17
CCM2-216ENST00000488727 ZMAT4Q9H898 229 aa14.01□□□□□ -0.17
CCM2-216ENST00000488727 SPRY2O43597 315 aa14□□□□□ -0.17
CCM2-216ENST00000488727 RNASE3P12724 160 aaKnown RBP14□□□□□ -0.17
CCM2-216ENST00000488727 CDKN1BP46527 198 aa14□□□□□ -0.17
CCM2-216ENST00000488727 COL5A1-AS1Q5SY13 56 aa14□□□□□ -0.17
CCM2-216ENST00000488727 TP53TG1Q9Y2A0 90 aa14□□□□□ -0.17
CCM2-216ENST00000488727 GOLT1BQ9Y3E0 138 aa14□□□□□ -0.17
CCM2-216ENST00000488727 PHLDA3Q9Y5J5 127 aa14□□□□□ -0.17
CCM2-216ENST00000488727 RBMY1A1P0DJD3 496 aaKnown RBP13.98□□□□□ -0.17
CCM2-216ENST00000488727 RBMY1CP0DJD4 496 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms