RNA–Protein interactions for RNA: ENST00000488723.1

CDK5RAP1-214, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-214ENST00000488723 MRPL23Q16540 153 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP1-214ENST00000488723 RNF212Q495C1 297 aa11.9□□□□□ -0.5
CDK5RAP1-214ENST00000488723 SH2D6Q7Z4S9 175 aa11.9□□□□□ -0.5
CDK5RAP1-214ENST00000488723 LINC00476Q8WZB0 136 aa11.9□□□□□ -0.5
CDK5RAP1-214ENST00000488723 PRADC1Q9BSG0 188 aa11.9□□□□□ -0.5
CDK5RAP1-214ENST00000488723 TPPP3Q9BW30 176 aa11.9□□□□□ -0.5
CDK5RAP1-214ENST00000488723 JPT2Q9H910 190 aa11.9□□□□□ -0.5
CDK5RAP1-214ENST00000488723 PPP1R2P9O14990 202 aa11.89□□□□□ -0.51
CDK5RAP1-214ENST00000488723 NUDT3O95989 172 aa11.89□□□□□ -0.51
CDK5RAP1-214ENST00000488723 NTF3P20783 257 aa11.89□□□□□ -0.51
CDK5RAP1-214ENST00000488723 FAM3BP58499 235 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP1-214ENST00000488723 RHOHQ15669 191 aa11.89□□□□□ -0.51
CDK5RAP1-214ENST00000488723 SLC25A29Q8N8R3 303 aa11.89□□□□□ -0.51
CDK5RAP1-214ENST00000488723 AP1S3Q96PC3 154 aa11.89□□□□□ -0.51
CDK5RAP1-214ENST00000488723 SEC11CQ9BY50 192 aa11.89□□□□□ -0.51
CDK5RAP1-214ENST00000488723 SAMD10Q9BYL1 202 aa11.89□□□□□ -0.51
CDK5RAP1-214ENST00000488723 ICOSQ9Y6W8 199 aa11.89□□□□□ -0.51
CDK5RAP1-214ENST00000488723 A0A096LPF7 62 aa11.88□□□□□ -0.51
CDK5RAP1-214ENST00000488723 TRGC1P0CF51 173 aa11.88□□□□□ -0.51
CDK5RAP1-214ENST00000488723 SMIM17P0DL12 118 aa11.88□□□□□ -0.51
CDK5RAP1-214ENST00000488723 HIGD1CA8MV81 97 aa11.87□□□□□ -0.51
CDK5RAP1-214ENST00000488723 F8W036 122 aa11.87□□□□□ -0.51
CDK5RAP1-214ENST00000488723 RAB4BP61018 213 aa11.87□□□□□ -0.51
CDK5RAP1-214ENST00000488723 BORCS7Q96B45 105 aa11.87□□□□□ -0.51
CDK5RAP1-214ENST00000488723 NAT8BQ9UHF3 227 aa11.87□□□□□ -0.51
CDK5RAP1-214ENST00000488723 KIF25-AS1Q9Y6Z4 181 aa11.87□□□□□ -0.51
CDK5RAP1-214ENST00000488723 KMT2CQ8NEZ4 4911 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP1-214ENST00000488723 A0A087WWL8 130 aa11.86□□□□□ -0.51
CDK5RAP1-214ENST00000488723 IGHV3-73A0A0B4J1V6 119 aa11.86□□□□□ -0.51
CDK5RAP1-214ENST00000488723 MUC21A0A0G2JKD1 596 aa11.86□□□□□ -0.51
CDK5RAP1-214ENST00000488723 TRBV10-1A0A0K0K1A3 114 aa11.86□□□□□ -0.51
CDK5RAP1-214ENST00000488723 MUC21A0A140T8X8 626 aa11.86□□□□□ -0.51
CDK5RAP1-214ENST00000488723 SMIM27A0A1W2PRY6 76 aa11.86□□□□□ -0.51
CDK5RAP1-214ENST00000488723 K7EQD1 137 aa11.86□□□□□ -0.51
CDK5RAP1-214ENST00000488723 MT-ND4LP03901 98 aa11.86□□□□□ -0.51
CDK5RAP1-214ENST00000488723 GYPEP15421 78 aa11.86□□□□□ -0.51
CDK5RAP1-214ENST00000488723 CCL18P55774 89 aa11.86□□□□□ -0.51
CDK5RAP1-214ENST00000488723 FAM74A4Q5TZK3 123 aa11.86□□□□□ -0.51
CDK5RAP1-214ENST00000488723 ANAPC16Q96DE5 110 aa11.86□□□□□ -0.51
CDK5RAP1-214ENST00000488723 ALMS1Q8TCU4 4167 aa11.85□□□□□ -0.51
CDK5RAP1-214ENST00000488723 A0A1B0GUT8 65 aa11.85□□□□□ -0.51
CDK5RAP1-214ENST00000488723 SRIP30626 198 aa11.85□□□□□ -0.51
CDK5RAP1-214ENST00000488723 TWIST1Q15672 202 aa11.85□□□□□ -0.51
CDK5RAP1-214ENST00000488723 C10orf91Q5T1B1 145 aa11.85□□□□□ -0.51
CDK5RAP1-214ENST00000488723 NEGR1Q7Z3B1 354 aa11.85□□□□□ -0.51
CDK5RAP1-214ENST00000488723 C14orf178Q8N769 122 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP1-214ENST00000488723 PGLYRP4Q96LB8 373 aa11.85□□□□□ -0.51
CDK5RAP1-214ENST00000488723 MSRB1Q9NZV6 116 aa11.85□□□□□ -0.51
CDK5RAP1-214ENST00000488723 DNAH1Q9P2D7 4330 aa11.85□□□□□ -0.51
CDK5RAP1-214ENST00000488723 LY6G6CO95867 125 aa11.84□□□□□ -0.51
CDK5RAP1-214ENST00000488723 ADCYAP1P18509 176 aa11.84□□□□□ -0.51
CDK5RAP1-214ENST00000488723 LINC00315P59091 139 aa11.84□□□□□ -0.51
CDK5RAP1-214ENST00000488723 Q6ZSN1 163 aa11.84□□□□□ -0.51
CDK5RAP1-214ENST00000488723 SMIM15Q7Z3B0 74 aa11.84□□□□□ -0.51
CDK5RAP1-214ENST00000488723 DPH3P1Q9H4G8 78 aa11.84□□□□□ -0.51
CDK5RAP1-214ENST00000488723 VPS13DQ5THJ4 4388 aa11.83□□□□□ -0.52
CDK5RAP1-214ENST00000488723 TIRAPP58753 221 aa11.83□□□□□ -0.52
CDK5RAP1-214ENST00000488723 SSTP61278 116 aa11.83□□□□□ -0.52
CDK5RAP1-214ENST00000488723 NUP35Q8NFH5 326 aa11.83□□□□□ -0.52
CDK5RAP1-214ENST00000488723 A0A1B0GW15 77 aa11.82□□□□□ -0.52
CDK5RAP1-214ENST00000488723 EVI2AP22794 236 aa11.82□□□□□ -0.52
CDK5RAP1-214ENST00000488723 RIGQ13278 110 aa11.82□□□□□ -0.52
CDK5RAP1-214ENST00000488723 FRZBQ92765 325 aa11.82□□□□□ -0.52
CDK5RAP1-214ENST00000488723 CARHSP1Q9Y2V2 147 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP1-214ENST00000488723 H7C1H1 209 aa11.81□□□□□ -0.52
CDK5RAP1-214ENST00000488723 ZNF56Q15929 161 aa11.81□□□□□ -0.52
CDK5RAP1-214ENST00000488723 ESRGQ1W209 222 aa11.81□□□□□ -0.52
CDK5RAP1-214ENST00000488723 UBE2DNLQ8IWF7 75 aa11.81□□□□□ -0.52
CDK5RAP1-214ENST00000488723 UPK3BQ9BT76 320 aa11.81□□□□□ -0.52
CDK5RAP1-214ENST00000488723 CTDSP1Q9GZU7 261 aa11.81□□□□□ -0.52
CDK5RAP1-214ENST00000488723 F5H697 171 aa11.8□□□□□ -0.52
CDK5RAP1-214ENST00000488723 LYPD5Q6UWN5 251 aa11.8□□□□□ -0.52
CDK5RAP1-214ENST00000488723 IMMP2LQ96T52 175 aa11.8□□□□□ -0.52
CDK5RAP1-214ENST00000488723 TMEM191AQ9H0A3 160 aa11.8□□□□□ -0.52
CDK5RAP1-214ENST00000488723 LINC00588Q9Y4M8 146 aa11.8□□□□□ -0.52
CDK5RAP1-214ENST00000488723 SACSQ9NZJ4 4579 aa11.79□□□□□ -0.52
CDK5RAP1-214ENST00000488723 LINC00694P0DN24 101 aa11.79□□□□□ -0.52
CDK5RAP1-214ENST00000488723 MRPS16Q9Y3D3 137 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP1-214ENST00000488723 TRBV7-3A0A075B6L6 115 aa11.78□□□□□ -0.52
CDK5RAP1-214ENST00000488723 LOC100131303A0A0U1RQF7 123 aa11.78□□□□□ -0.52
CDK5RAP1-214ENST00000488723 S100A8P05109 93 aa11.78□□□□□ -0.52
CDK5RAP1-214ENST00000488723 RPL36AP83881 106 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP1-214ENST00000488723 ATP6V0E2Q8NHE4 81 aa11.78□□□□□ -0.52
CDK5RAP1-214ENST00000488723 RPL36ALQ969Q0 106 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP1-214ENST00000488723 DNAJC30Q96LL9 226 aa11.78□□□□□ -0.52
CDK5RAP1-214ENST00000488723 TMEM242Q9NWH2 141 aa11.78□□□□□ -0.52
CDK5RAP1-214ENST00000488723 M0QY20 66 aa11.77□□□□□ -0.53
CDK5RAP1-214ENST00000488723 ATP5L2Q7Z4Y8 100 aa11.77□□□□□ -0.53
CDK5RAP1-214ENST00000488723 GTSF1LQ9H1H1 148 aa11.77□□□□□ -0.53
CDK5RAP1-214ENST00000488723 MGPP08493 103 aa11.76□□□□□ -0.53
CDK5RAP1-214ENST00000488723 NDUFA5Q16718 116 aa11.76□□□□□ -0.53
CDK5RAP1-214ENST00000488723 ZNRF2Q8NHG8 242 aa11.76□□□□□ -0.53
CDK5RAP1-214ENST00000488723 KMT2AQ03164 3969 aa11.76□□□□□ -0.53
CDK5RAP1-214ENST00000488723 A0A087WWC5 75 aa11.75□□□□□ -0.53
CDK5RAP1-214ENST00000488723 GAGE12JA6NER3 117 aa11.75□□□□□ -0.53
CDK5RAP1-214ENST00000488723 UBE2D3P61077 147 aa11.75□□□□□ -0.53
CDK5RAP1-214ENST00000488723 UBE2D2P62837 147 aa11.75□□□□□ -0.53
CDK5RAP1-214ENST00000488723 GAGE1Q13065 139 aa11.75□□□□□ -0.53
CDK5RAP1-214ENST00000488723 GAGE4Q13068 117 aa11.75□□□□□ -0.53
CDK5RAP1-214ENST00000488723 GAGE5Q13069 117 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms