RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 CCDC140Q96MF4 163 aa10.4□□□□□ -0.74
COPS7B-221ENST00000488111 MRPL35Q9NZE8 188 aaKnown RBP10.4□□□□□ -0.74
COPS7B-221ENST00000488111 IGLV2-18A0A075B6J9 118 aa10.39□□□□□ -0.75
COPS7B-221ENST00000488111 PSMB8P28062 276 aa10.39□□□□□ -0.75
COPS7B-221ENST00000488111 SMCPP49901 116 aaPredicted RBP10.39□□□□□ -0.75
COPS7B-221ENST00000488111 Q8N8P6 123 aa10.39□□□□□ -0.75
COPS7B-221ENST00000488111 EEF1AKMT3Q96AZ1 226 aa10.39□□□□□ -0.75
COPS7B-221ENST00000488111 ZNF580Q9UK33 172 aa10.39□□□□□ -0.75
COPS7B-221ENST00000488111 FAM223BA6NKX1 122 aa10.39□□□□□ -0.75
COPS7B-221ENST00000488111 H3BUA1 57 aa10.39□□□□□ -0.75
COPS7B-221ENST00000488111 CTSGP08311 255 aa10.39□□□□□ -0.75
COPS7B-221ENST00000488111 FAM223AQ8IWN6 122 aa10.39□□□□□ -0.75
COPS7B-221ENST00000488111 ZNF491Q8N8L2 437 aa10.39□□□□□ -0.75
COPS7B-221ENST00000488111 PRR25Q96S07 402 aa10.39□□□□□ -0.75
COPS7B-221ENST00000488111 AAMDCQ9H7C9 122 aa10.39□□□□□ -0.75
COPS7B-221ENST00000488111 MSRB1Q9NZV6 116 aa10.39□□□□□ -0.75
COPS7B-221ENST00000488111 OR11H12B2RN74 326 aa10.38□□□□□ -0.75
COPS7B-221ENST00000488111 MT-ATP8P03928 68 aa10.38□□□□□ -0.75
COPS7B-221ENST00000488111 OR11H1Q8NG94 326 aa10.38□□□□□ -0.75
COPS7B-221ENST00000488111 OR11H2Q8NH07 326 aa10.38□□□□□ -0.75
COPS7B-221ENST00000488111 RNF125Q96EQ8 232 aa10.38□□□□□ -0.75
COPS7B-221ENST00000488111 IGHV3OR16-8A0A075B7F1 116 aa10.38□□□□□ -0.75
COPS7B-221ENST00000488111 A0A087WX48 190 aa10.38□□□□□ -0.75
COPS7B-221ENST00000488111 TRBV12-3P01733 135 aa10.38□□□□□ -0.75
COPS7B-221ENST00000488111 ZNF80P51504 273 aaPredicted RBP10.38□□□□□ -0.75
COPS7B-221ENST00000488111 FHL3Q13643 280 aa10.38□□□□□ -0.75
COPS7B-221ENST00000488111 Q6ZUT4 128 aa10.38□□□□□ -0.75
COPS7B-221ENST00000488111 ERG28Q9UKR5 140 aa10.38□□□□□ -0.75
COPS7B-221ENST00000488111 TRBV7-1A0A0A6YYK4 115 aa10.37□□□□□ -0.75
COPS7B-221ENST00000488111 NFE4Q86UQ8 179 aa10.37□□□□□ -0.75
COPS7B-221ENST00000488111 IGKV2-40A0A087WW87 121 aaPredicted RBP10.37□□□□□ -0.75
COPS7B-221ENST00000488111 BRI3O95415 125 aa10.37□□□□□ -0.75
COPS7B-221ENST00000488111 IGKV2D-40P01614 121 aaPredicted RBP10.37□□□□□ -0.75
COPS7B-221ENST00000488111 USMG5Q96IX5 58 aa10.37□□□□□ -0.75
COPS7B-221ENST00000488111 GATA1P15976 413 aaPredicted RBP10.36□□□□□ -0.75
COPS7B-221ENST00000488111 PLNP26678 52 aa10.36□□□□□ -0.75
COPS7B-221ENST00000488111 XGP55808 180 aa10.36□□□□□ -0.75
COPS7B-221ENST00000488111 C11orf44Q8N8P7 122 aa10.36□□□□□ -0.75
COPS7B-221ENST00000488111 LINC01006Q8NI28 216 aa10.36□□□□□ -0.75
COPS7B-221ENST00000488111 DLX4Q92988 240 aaPredicted RBP10.36□□□□□ -0.75
COPS7B-221ENST00000488111 IL4P05112 153 aa10.36□□□□□ -0.75
COPS7B-221ENST00000488111 MYOZ3Q8TDC0 251 aa10.36□□□□□ -0.75
COPS7B-221ENST00000488111 MYMXA0A1B0GTQ4 84 aa10.35□□□□□ -0.75
COPS7B-221ENST00000488111 ELANEP08246 267 aa10.34□□□□□ -0.75
COPS7B-221ENST00000488111 RNF183Q96D59 192 aa10.34□□□□□ -0.75
COPS7B-221ENST00000488111 PGPEP1Q9NXJ5 209 aa10.34□□□□□ -0.75
COPS7B-221ENST00000488111 ARL3P36405 182 aa10.34□□□□□ -0.75
COPS7B-221ENST00000488111 C18orf65Q6ZTR6 163 aa10.34□□□□□ -0.75
COPS7B-221ENST00000488111 TMEM89A2RUT3 159 aa10.33□□□□□ -0.76
COPS7B-221ENST00000488111 LAGE3Q14657 143 aa10.33□□□□□ -0.76
COPS7B-221ENST00000488111 KHDC1LQ5JSQ8 128 aa10.33□□□□□ -0.76
COPS7B-221ENST00000488111 Q8TAT8 98 aa10.33□□□□□ -0.76
COPS7B-221ENST00000488111 GLMPQ8WWB7 406 aa10.33□□□□□ -0.76
COPS7B-221ENST00000488111 NIPBLQ6KC79 2804 aaeCLIP10.33□□□□□ -0.76
COPS7B-221ENST00000488111 TRAV12-1A0A0B4J245 112 aa10.33□□□□□ -0.76
COPS7B-221ENST00000488111 PPDPFLQ8WWR9 84 aa10.33□□□□□ -0.76
COPS7B-221ENST00000488111 CARD19Q96LW7 228 aa10.33□□□□□ -0.76
COPS7B-221ENST00000488111 VCX2Q9H322 139 aa10.33□□□□□ -0.76
COPS7B-221ENST00000488111 C16orf95Q9H693 158 aa10.33□□□□□ -0.76
COPS7B-221ENST00000488111 TEP1Q99973 2627 aaKnown RBP10.33□□□□□ -0.76
COPS7B-221ENST00000488111 SCGB2A1O75556 95 aa10.32□□□□□ -0.76
COPS7B-221ENST00000488111 F8VRH5 84 aa10.32□□□□□ -0.76
COPS7B-221ENST00000488111 ORM1P02763 201 aa10.32□□□□□ -0.76
COPS7B-221ENST00000488111 LGALS1P09382 135 aaKnown RBP10.32□□□□□ -0.76
COPS7B-221ENST00000488111 NRACQ8N912 160 aa10.32□□□□□ -0.76
COPS7B-221ENST00000488111 H7C1H1 209 aa10.31□□□□□ -0.76
COPS7B-221ENST00000488111 UBE2D1P51668 147 aa10.31□□□□□ -0.76
COPS7B-221ENST00000488111 UBE2D3P61077 147 aa10.31□□□□□ -0.76
COPS7B-221ENST00000488111 UBE2D2P62837 147 aa10.31□□□□□ -0.76
COPS7B-221ENST00000488111 RNF152Q8N8N0 203 aa10.31□□□□□ -0.76
COPS7B-221ENST00000488111 SETD2Q9BYW2 2564 aaPredicted RBP10.31□□□□□ -0.76
COPS7B-221ENST00000488111 FABP5P3A8MUU1 101 aa10.31□□□□□ -0.76
COPS7B-221ENST00000488111 CD28P10747 220 aa10.31□□□□□ -0.76
COPS7B-221ENST00000488111 TEN1Q86WV5 123 aa10.31□□□□□ -0.76
COPS7B-221ENST00000488111 UBE2E2Q96LR5 201 aa10.31□□□□□ -0.76
COPS7B-221ENST00000488111 AGRNO00468 2067 aa10.31□□□□□ -0.76
COPS7B-221ENST00000488111 NDUFA7O95182 113 aa10.3□□□□□ -0.76
COPS7B-221ENST00000488111 DEFB136Q30KP8 78 aa10.3□□□□□ -0.76
COPS7B-221ENST00000488111 UNQ9165/PRO28630Q6UXU0 137 aa10.3□□□□□ -0.76
COPS7B-221ENST00000488111 SBSPONQ8IVN8 264 aa10.3□□□□□ -0.76
COPS7B-221ENST00000488111 ZFAND3Q9H8U3 227 aa10.3□□□□□ -0.76
COPS7B-221ENST00000488111 IGHV3OR16-13A0A075B7E8 117 aa10.3□□□□□ -0.76
COPS7B-221ENST00000488111 IGHV3-74A0A0B4J1X5 117 aa10.3□□□□□ -0.76
COPS7B-221ENST00000488111 LINC01549A6NIU2 74 aa10.3□□□□□ -0.76
COPS7B-221ENST00000488111 PSMB2P49721 201 aa10.3□□□□□ -0.76
COPS7B-221ENST00000488111 MAST4O15021 2626 aa10.29□□□□□ -0.76
COPS7B-221ENST00000488111 IGHV3-49A0A0A0MS15 119 aa10.29□□□□□ -0.76
COPS7B-221ENST00000488111 A0A1W2PRX2 142 aa10.29□□□□□ -0.76
COPS7B-221ENST00000488111 RPL7P18124 248 aaKnown RBP10.29□□□□□ -0.76
COPS7B-221ENST00000488111 PTH2Q96A98 100 aa10.29□□□□□ -0.76
COPS7B-221ENST00000488111 DUX3Q96PT4 197 aa10.29□□□□□ -0.76
COPS7B-221ENST00000488111 JMJD1CQ15652 2540 aa10.29□□□□□ -0.76
COPS7B-221ENST00000488111 IGHV3-66A0A0C4DH42 116 aa10.29□□□□□ -0.76
COPS7B-221ENST00000488111 CLPSL1A2RUU4 121 aa10.29□□□□□ -0.76
COPS7B-221ENST00000488111 TMEM78Q5T7P6 136 aa10.29□□□□□ -0.76
COPS7B-221ENST00000488111 ANAPC13Q9BS18 74 aa10.29□□□□□ -0.76
COPS7B-221ENST00000488111 SS18L2Q9UHA2 77 aa10.29□□□□□ -0.76
COPS7B-221ENST00000488111 IGHV4OR15-8A0A075B7B6 117 aa10.28□□□□□ -0.76
COPS7B-221ENST00000488111 A0A087WW49 117 aa10.28□□□□□ -0.76
COPS7B-221ENST00000488111 PRSS29PA6NIE9 313 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms