RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 OR4C5Q8NGB2 326 aa7.89□□□□□ -1.15
HDLBP-242ENST00000488013 DPH3P1Q9H4G8 78 aa7.89□□□□□ -1.15
HDLBP-242ENST00000488013 MRPL16Q9NX20 251 aaKnown RBP7.89□□□□□ -1.15
HDLBP-242ENST00000488013 U3KQK5 164 aa7.89□□□□□ -1.15
HDLBP-242ENST00000488013 GAGE12BA1L429 117 aa7.88□□□□□ -1.15
HDLBP-242ENST00000488013 RS1O15537 224 aa7.88□□□□□ -1.15
HDLBP-242ENST00000488013 GAGE7O76087 117 aa7.88□□□□□ -1.15
HDLBP-242ENST00000488013 PPP1R17O96001 155 aa7.88□□□□□ -1.15
HDLBP-242ENST00000488013 GAGE12FP0CL80 117 aa7.88□□□□□ -1.15
HDLBP-242ENST00000488013 GAGE12GP0CL81 117 aa7.88□□□□□ -1.15
HDLBP-242ENST00000488013 GAGE12IP0CL82 117 aa7.88□□□□□ -1.15
HDLBP-242ENST00000488013 DEFB130BP0DP73 79 aa7.88□□□□□ -1.15
HDLBP-242ENST00000488013 DEFB130AP0DP74 79 aa7.88□□□□□ -1.15
HDLBP-242ENST00000488013 RAB4BP61018 213 aa7.88□□□□□ -1.15
HDLBP-242ENST00000488013 C11orf45Q8TAV5 145 aa7.88□□□□□ -1.15
HDLBP-242ENST00000488013 YPEL4Q96NS1 127 aa7.88□□□□□ -1.15
HDLBP-242ENST00000488013 TGIF2-C20orf24A0A0A6YYL0 155 aa7.87□□□□□ -1.15
HDLBP-242ENST00000488013 MUC21A0A0G2JKD1 596 aa7.87□□□□□ -1.15
HDLBP-242ENST00000488013 A0A0J9YWU9 116 aa7.87□□□□□ -1.15
HDLBP-242ENST00000488013 MUC21A0A140T8X8 626 aa7.87□□□□□ -1.15
HDLBP-242ENST00000488013 H7C1H1 209 aa7.87□□□□□ -1.15
HDLBP-242ENST00000488013 DEFB4AO15263 64 aa7.87□□□□□ -1.15
HDLBP-242ENST00000488013 PPBPP02775 128 aa7.87□□□□□ -1.15
HDLBP-242ENST00000488013 ATP5G1P05496 136 aa7.87□□□□□ -1.15
HDLBP-242ENST00000488013 EVI2AP22794 236 aa7.87□□□□□ -1.15
HDLBP-242ENST00000488013 SSTP61278 116 aa7.87□□□□□ -1.15
HDLBP-242ENST00000488013 CFAP126Q5VTH2 177 aa7.87□□□□□ -1.15
HDLBP-242ENST00000488013 C14orf178Q8N769 122 aaPredicted RBP7.87□□□□□ -1.15
HDLBP-242ENST00000488013 FAM104BQ5XKR9 115 aa7.86□□□□□ -1.15
HDLBP-242ENST00000488013 MRAP2Q96G30 205 aa7.86□□□□□ -1.15
HDLBP-242ENST00000488013 MSRB1Q9NZV6 116 aa7.86□□□□□ -1.15
HDLBP-242ENST00000488013 NBEAL2Q6ZNJ1 2754 aa7.85□□□□□ -1.15
HDLBP-242ENST00000488013 COLCA2A8K830 154 aa7.85□□□□□ -1.15
HDLBP-242ENST00000488013 F5H697 171 aa7.85□□□□□ -1.15
HDLBP-242ENST00000488013 GHRHP01286 108 aa7.85□□□□□ -1.15
HDLBP-242ENST00000488013 CRYGDP07320 174 aa7.85□□□□□ -1.15
HDLBP-242ENST00000488013 RAB5AP20339 215 aa7.85□□□□□ -1.15
HDLBP-242ENST00000488013 FAM74A4Q5TZK3 123 aa7.85□□□□□ -1.15
HDLBP-242ENST00000488013 POM121L12Q8N7R1 296 aa7.85□□□□□ -1.15
HDLBP-242ENST00000488013 A0A087WWL8 130 aa7.84□□□□□ -1.15
HDLBP-242ENST00000488013 TRGV4A0A0C4DH28 118 aa7.84□□□□□ -1.15
HDLBP-242ENST00000488013 TRBV10-1A0A0K0K1A3 114 aa7.84□□□□□ -1.15
HDLBP-242ENST00000488013 TRBV6-4A0A1B0GX49 114 aa7.84□□□□□ -1.15
HDLBP-242ENST00000488013 FAM229AH3BQW9 127 aa7.84□□□□□ -1.15
HDLBP-242ENST00000488013 SCO1O75880 301 aa7.84□□□□□ -1.15
HDLBP-242ENST00000488013 APCSP02743 223 aa7.84□□□□□ -1.15
HDLBP-242ENST00000488013 C12orf74Q32Q52 190 aa7.84□□□□□ -1.15
HDLBP-242ENST00000488013 UFSP1Q6NVU6 142 aa7.84□□□□□ -1.15
HDLBP-242ENST00000488013 TMEM136Q6ZRR5 245 aa7.84□□□□□ -1.15
HDLBP-242ENST00000488013 PRADC1Q9BSG0 188 aa7.84□□□□□ -1.15
HDLBP-242ENST00000488013 EDA2RQ9HAV5 297 aa7.84□□□□□ -1.15
HDLBP-242ENST00000488013 LAMTOR2Q9Y2Q5 125 aa7.84□□□□□ -1.15
HDLBP-242ENST00000488013 TRAPPC1Q9Y5R8 145 aa7.84□□□□□ -1.15
HDLBP-242ENST00000488013 KIF25-AS1Q9Y6Z4 181 aa7.84□□□□□ -1.15
HDLBP-242ENST00000488013 MEGF8Q7Z7M0 2845 aa7.84□□□□□ -1.15
HDLBP-242ENST00000488013 PHOX2AO14813 284 aa7.83□□□□□ -1.16
HDLBP-242ENST00000488013 IGHV3-53P01767 116 aa7.83□□□□□ -1.16
HDLBP-242ENST00000488013 MGPP08493 103 aa7.83□□□□□ -1.16
HDLBP-242ENST00000488013 RAB4AP20338 218 aa7.83□□□□□ -1.16
HDLBP-242ENST00000488013 CKS2P33552 79 aa7.83□□□□□ -1.16
HDLBP-242ENST00000488013 RPS10P46783 165 aaKnown RBP7.83□□□□□ -1.16
HDLBP-242ENST00000488013 RHOHQ15669 191 aa7.83□□□□□ -1.16
HDLBP-242ENST00000488013 ZNF56Q15929 161 aa7.83□□□□□ -1.16
HDLBP-242ENST00000488013 AMN1Q8IY45 258 aa7.83□□□□□ -1.16
HDLBP-242ENST00000488013 ORMDL3Q8N138 153 aa7.83□□□□□ -1.16
HDLBP-242ENST00000488013 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.83□□□□□ -1.16
HDLBP-242ENST00000488013 PRO0255Q9UI72 69 aa7.83□□□□□ -1.16
HDLBP-242ENST00000488013 CELA1Q9UNI1 258 aa7.83□□□□□ -1.16
HDLBP-242ENST00000488013 HHLA3Q9XRX5 114 aa7.83□□□□□ -1.16
HDLBP-242ENST00000488013 TRAV10A0A0B4J240 114 aa7.82□□□□□ -1.16
HDLBP-242ENST00000488013 H3BNG1 76 aa7.82□□□□□ -1.16
HDLBP-242ENST00000488013 GATA1P15976 413 aaPredicted RBP7.82□□□□□ -1.16
HDLBP-242ENST00000488013 LINC00315P59091 139 aa7.82□□□□□ -1.16
HDLBP-242ENST00000488013 FABP9Q0Z7S8 132 aa7.82□□□□□ -1.16
HDLBP-242ENST00000488013 SH2D6Q7Z4S9 175 aa7.82□□□□□ -1.16
HDLBP-242ENST00000488013 ZNF479Q96JC4 524 aa7.82□□□□□ -1.16
HDLBP-242ENST00000488013 DNAJC30Q96LL9 226 aa7.82□□□□□ -1.16
HDLBP-242ENST00000488013 SAMD10Q9BYL1 202 aa7.82□□□□□ -1.16
HDLBP-242ENST00000488013 MRPL18Q9H0U6 180 aaKnown RBP7.82□□□□□ -1.16
HDLBP-242ENST00000488013 JPT2Q9H910 190 aa7.82□□□□□ -1.16
HDLBP-242ENST00000488013 DNAH9Q9NYC9 4486 aa7.82□□□□□ -1.16
HDLBP-242ENST00000488013 FHL2Q14192 279 aa7.81□□□□□ -1.16
HDLBP-242ENST00000488013 RNF185Q96GF1 192 aa7.81□□□□□ -1.16
HDLBP-242ENST00000488013 DEFB131BA0A096LNP1 70 aa7.8□□□□□ -1.16
HDLBP-242ENST00000488013 F5H768 121 aa7.8□□□□□ -1.16
HDLBP-242ENST00000488013 K7EQD1 137 aa7.8□□□□□ -1.16
HDLBP-242ENST00000488013 M0QY20 66 aa7.8□□□□□ -1.16
HDLBP-242ENST00000488013 MRPL51Q4U2R6 128 aaKnown RBP7.8□□□□□ -1.16
HDLBP-242ENST00000488013 SUMO4Q6EEV6 95 aa7.8□□□□□ -1.16
HDLBP-242ENST00000488013 C20orf78Q9BR46 151 aa7.8□□□□□ -1.16
HDLBP-242ENST00000488013 NIT2Q9NQR4 276 aa7.8□□□□□ -1.16
HDLBP-242ENST00000488013 HUWE1Q7Z6Z7 4374 aaKnown RBP7.8□□□□□ -1.16
HDLBP-242ENST00000488013 IGHV3-73A0A0B4J1V6 119 aa7.79□□□□□ -1.16
HDLBP-242ENST00000488013 D6R8Y8 96 aa7.79□□□□□ -1.16
HDLBP-242ENST00000488013 PAX4O43316 350 aa7.79□□□□□ -1.16
HDLBP-242ENST00000488013 CRYBA4P53673 196 aa7.79□□□□□ -1.16
HDLBP-242ENST00000488013 NANOS2P60321 138 aaKnown RBP7.79□□□□□ -1.16
HDLBP-242ENST00000488013 RPL36AP83881 106 aaKnown RBP7.79□□□□□ -1.16
HDLBP-242ENST00000488013 Q6ZTC4 211 aa7.79□□□□□ -1.16
HDLBP-242ENST00000488013 SLC25A29Q8N8R3 303 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms