RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 S100A8P05109 93 aa10.37□□□□□ -0.75
LRIF1-202ENST00000485275 TRGC1P0CF51 173 aa10.37□□□□□ -0.75
LRIF1-202ENST00000485275 MIFP14174 115 aa10.37□□□□□ -0.75
LRIF1-202ENST00000485275 RAB4AP20338 218 aa10.37□□□□□ -0.75
LRIF1-202ENST00000485275 COX19Q49B96 90 aa10.37□□□□□ -0.75
LRIF1-202ENST00000485275 MRPL51Q4U2R6 128 aaKnown RBP10.37□□□□□ -0.75
LRIF1-202ENST00000485275 UFSP1Q6NVU6 142 aa10.37□□□□□ -0.75
LRIF1-202ENST00000485275 TRAV26-2A0A0B4J265 109 aa10.36□□□□□ -0.75
LRIF1-202ENST00000485275 SMKR1H3BMG3 65 aa10.36□□□□□ -0.75
LRIF1-202ENST00000485275 FAM74A4Q5TZK3 123 aa10.36□□□□□ -0.75
LRIF1-202ENST00000485275 CFAP126Q5VTH2 177 aa10.36□□□□□ -0.75
LRIF1-202ENST00000485275 LINC00612Q8N6U2 182 aa10.36□□□□□ -0.75
LRIF1-202ENST00000485275 NCR2O95944 276 aa10.35□□□□□ -0.75
LRIF1-202ENST00000485275 LGALS9BQ3B8N2 356 aa10.35□□□□□ -0.75
LRIF1-202ENST00000485275 PIK3CD-AS1Q5SR53 167 aa10.35□□□□□ -0.75
LRIF1-202ENST00000485275 FAM222AQ5U5X8 452 aa10.35□□□□□ -0.75
LRIF1-202ENST00000485275 DPH3P1Q9H4G8 78 aa10.35□□□□□ -0.75
LRIF1-202ENST00000485275 IGHV3-73A0A0B4J1V6 119 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 GAGE12BA1L429 117 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 HIST1H2BKO60814 126 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 GAGE7O76087 117 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 HIST1H2BJP06899 126 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 GAGE12FP0CL80 117 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 GAGE12GP0CL81 117 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 GAGE12IP0CL82 117 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 GATA1P15976 413 aaPredicted RBP10.34□□□□□ -0.75
LRIF1-202ENST00000485275 HIST1H2BOP23527 126 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 HIST1H2BBP33778 126 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 HIST1H2BDP58876 126 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 HIST1H2BCP62807 126 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 HIST2H2BEQ16778 126 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.34□□□□□ -0.75
LRIF1-202ENST00000485275 HIST1H2BHQ93079 126 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 HIST1H2BNQ99877 126 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 HIST1H2BMQ99879 126 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 DKK2Q9UBU2 259 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 TMA7Q9Y2S6 64 aaKnown RBP10.34□□□□□ -0.75
LRIF1-202ENST00000485275 D6R8Y8 96 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 RS1O15537 224 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 MGPP08493 103 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 ZNF479Q96JC4 524 aa10.34□□□□□ -0.75
LRIF1-202ENST00000485275 IGHV3-53P01767 116 aa10.33□□□□□ -0.76
LRIF1-202ENST00000485275 SRIP30626 198 aa10.33□□□□□ -0.76
LRIF1-202ENST00000485275 Q6ZSN1 163 aa10.33□□□□□ -0.76
LRIF1-202ENST00000485275 A8MWV9 139 aa10.32□□□□□ -0.76
LRIF1-202ENST00000485275 DEFA6Q01524 100 aa10.32□□□□□ -0.76
LRIF1-202ENST00000485275 SPATA25Q9BR10 227 aa10.32□□□□□ -0.76
LRIF1-202ENST00000485275 ALKBH7Q9BT30 221 aaPredicted RBP10.32□□□□□ -0.76
LRIF1-202ENST00000485275 NDUFAF3Q9BU61 184 aa10.32□□□□□ -0.76
LRIF1-202ENST00000485275 U3KQK5 164 aa10.32□□□□□ -0.76
LRIF1-202ENST00000485275 C1orf196B1AJZ1 125 aa10.31□□□□□ -0.76
LRIF1-202ENST00000485275 DEFB130BP0DP73 79 aa10.31□□□□□ -0.76
LRIF1-202ENST00000485275 DEFB130AP0DP74 79 aa10.31□□□□□ -0.76
LRIF1-202ENST00000485275 SUMO4Q6EEV6 95 aa10.31□□□□□ -0.76
LRIF1-202ENST00000485275 SMIM15Q7Z3B0 74 aa10.31□□□□□ -0.76
LRIF1-202ENST00000485275 Q9UF83 564 aa10.31□□□□□ -0.76
LRIF1-202ENST00000485275 NRACQ8N912 160 aa10.31□□□□□ -0.76
LRIF1-202ENST00000485275 B9D2Q9BPU9 175 aa10.31□□□□□ -0.76
LRIF1-202ENST00000485275 TRAV4A0A0B4J268 109 aa10.3□□□□□ -0.76
LRIF1-202ENST00000485275 LYRM9A8MSI8 78 aa10.3□□□□□ -0.76
LRIF1-202ENST00000485275 NPYP01303 97 aa10.3□□□□□ -0.76
LRIF1-202ENST00000485275 SMIM17P0DL12 118 aa10.3□□□□□ -0.76
LRIF1-202ENST00000485275 ZNF56Q15929 161 aa10.3□□□□□ -0.76
LRIF1-202ENST00000485275 IQCJQ1A5X6 159 aa10.3□□□□□ -0.76
LRIF1-202ENST00000485275 RPL39LQ96EH5 51 aaKnown RBP10.3□□□□□ -0.76
LRIF1-202ENST00000485275 C11orf68Q9H3H3 251 aaKnown RBP10.3□□□□□ -0.76
LRIF1-202ENST00000485275 TRGV2A0A075B6R0 118 aa10.29□□□□□ -0.76
LRIF1-202ENST00000485275 A0A0J9YWU9 116 aa10.29□□□□□ -0.76
LRIF1-202ENST00000485275 P0DMU3 169 aa10.29□□□□□ -0.76
LRIF1-202ENST00000485275 FAM231AP0DMU4 169 aa10.29□□□□□ -0.76
LRIF1-202ENST00000485275 FAM231CP0DMU5 169 aa10.29□□□□□ -0.76
LRIF1-202ENST00000485275 CKS2P33552 79 aa10.29□□□□□ -0.76
LRIF1-202ENST00000485275 ORMDL3Q8N138 153 aa10.29□□□□□ -0.76
LRIF1-202ENST00000485275 OR4C5Q8NGB2 326 aa10.29□□□□□ -0.76
LRIF1-202ENST00000485275 C18orf15Q96N68 181 aa10.29□□□□□ -0.76
LRIF1-202ENST00000485275 M0QY20 66 aa10.29□□□□□ -0.76
LRIF1-202ENST00000485275 C18orf32Q8TCD1 76 aa10.29□□□□□ -0.76
LRIF1-202ENST00000485275 LINC00310P59036 64 aa10.28□□□□□ -0.76
LRIF1-202ENST00000485275 RAB5BP61020 215 aa10.28□□□□□ -0.76
LRIF1-202ENST00000485275 ZFP2Q6ZN57 461 aa10.28□□□□□ -0.76
LRIF1-202ENST00000485275 MRAP2Q96G30 205 aa10.28□□□□□ -0.76
LRIF1-202ENST00000485275 PRELID3AQ96N28 172 aa10.28□□□□□ -0.76
LRIF1-202ENST00000485275 F5H697 171 aa10.27□□□□□ -0.77
LRIF1-202ENST00000485275 HOXA5P20719 270 aa10.27□□□□□ -0.77
LRIF1-202ENST00000485275 URB1-AS1Q96HZ7 61 aa10.27□□□□□ -0.77
LRIF1-202ENST00000485275 FBN3Q75N90 2809 aa10.27□□□□□ -0.77
LRIF1-202ENST00000485275 RHODO00212 210 aa10.26□□□□□ -0.77
LRIF1-202ENST00000485275 TNFRSF6BO95407 300 aa10.26□□□□□ -0.77
LRIF1-202ENST00000485275 FHL2Q14192 279 aa10.26□□□□□ -0.77
LRIF1-202ENST00000485275 SPART-AS1P0CW21 52 aa10.26□□□□□ -0.77
LRIF1-202ENST00000485275 C12orf74Q32Q52 190 aa10.26□□□□□ -0.77
LRIF1-202ENST00000485275 EDA2RQ9HAV5 297 aa10.26□□□□□ -0.77
LRIF1-202ENST00000485275 STAB2Q8WWQ8 2551 aa10.25□□□□□ -0.77
LRIF1-202ENST00000485275 PPBPP02775 128 aa10.25□□□□□ -0.77
LRIF1-202ENST00000485275 DAD1P61803 113 aa10.25□□□□□ -0.77
LRIF1-202ENST00000485275 SLC25A29Q8N8R3 303 aa10.24□□□□□ -0.77
LRIF1-202ENST00000485275 NUPR1O60356 82 aa10.24□□□□□ -0.77
LRIF1-202ENST00000485275 Q0VG73 95 aa10.24□□□□□ -0.77
LRIF1-202ENST00000485275 ZMAT4Q9H898 229 aa10.24□□□□□ -0.77
LRIF1-202ENST00000485275 LOC100131303A0A0U1RQF7 123 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms