RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CRYGDP07320 174 aa8.32□□□□□ -1.08
MSH5-216ENST00000484309 DNAH10OSP0CZ25 163 aa8.32□□□□□ -1.08
MSH5-216ENST00000484309 SSTP61278 116 aa8.32□□□□□ -1.08
MSH5-216ENST00000484309 MEF2BQ02080 365 aaPredicted RBP8.32□□□□□ -1.08
MSH5-216ENST00000484309 ZFP82Q8N141 532 aa8.32□□□□□ -1.08
MSH5-216ENST00000484309 OR10AG1Q8NH19 301 aa8.32□□□□□ -1.08
MSH5-216ENST00000484309 SFRP2Q96HF1 295 aa8.32□□□□□ -1.08
MSH5-216ENST00000484309 TRAV9-2A0A087WT02 112 aa8.31□□□□□ -1.08
MSH5-216ENST00000484309 TRAV8-6A0A0B4J262 113 aa8.31□□□□□ -1.08
MSH5-216ENST00000484309 IGHV3-38A0A0C4DH36 116 aa8.31□□□□□ -1.08
MSH5-216ENST00000484309 RHODO00212 210 aa8.31□□□□□ -1.08
MSH5-216ENST00000484309 IGLV2-8P01709 118 aa8.31□□□□□ -1.08
MSH5-216ENST00000484309 IGHV3-30P01768 117 aa8.31□□□□□ -1.08
MSH5-216ENST00000484309 IGHV3-33P01772 117 aa8.31□□□□□ -1.08
MSH5-216ENST00000484309 LINC00694P0DN24 101 aa8.31□□□□□ -1.08
MSH5-216ENST00000484309 IGHV3-30-3P0DP02 117 aa8.31□□□□□ -1.08
MSH5-216ENST00000484309 IGHV3-30-5P0DP03 117 aa8.31□□□□□ -1.08
MSH5-216ENST00000484309 MED14OSP0DP75 135 aa8.31□□□□□ -1.08
MSH5-216ENST00000484309 BCL2P10415 239 aa8.31□□□□□ -1.08
MSH5-216ENST00000484309 FUSP35637 526 aaKnown RBP eCLIP8.31□□□□□ -1.08
MSH5-216ENST00000484309 NKX2-5P52952 324 aaPredicted RBP8.31□□□□□ -1.08
MSH5-216ENST00000484309 TIRAPP58753 221 aa8.31□□□□□ -1.08
MSH5-216ENST00000484309 KRTAP10-2P60368 255 aa8.31□□□□□ -1.08
MSH5-216ENST00000484309 ALKAL2Q6UX46 152 aa8.31□□□□□ -1.08
MSH5-216ENST00000484309 GTSF1LQ9H1H1 148 aa8.31□□□□□ -1.08
MSH5-216ENST00000484309 MED9Q9NWA0 146 aa8.31□□□□□ -1.08
MSH5-216ENST00000484309 MSRB1Q9NZV6 116 aa8.31□□□□□ -1.08
MSH5-216ENST00000484309 GZMBP10144 247 aa8.3□□□□□ -1.08
MSH5-216ENST00000484309 BTF3P20290 206 aaKnown RBP8.3□□□□□ -1.08
MSH5-216ENST00000484309 LELP1Q5T871 98 aa8.3□□□□□ -1.08
MSH5-216ENST00000484309 Q8N3U1 123 aa8.3□□□□□ -1.08
MSH5-216ENST00000484309 GNG4P50150 75 aa8.29□□□□□ -1.08
MSH5-216ENST00000484309 TRBV20OR9-2A0A075B6H5 130 aa8.28□□□□□ -1.08
MSH5-216ENST00000484309 RBFOX3A6NFN3 312 aa8.28□□□□□ -1.08
MSH5-216ENST00000484309 SNAI2O43623 268 aa8.28□□□□□ -1.08
MSH5-216ENST00000484309 PDE6DO43924 150 aa8.28□□□□□ -1.08
MSH5-216ENST00000484309 CXCL1P09341 107 aa8.28□□□□□ -1.08
MSH5-216ENST00000484309 ERVFC1-1P60608 527 aa8.28□□□□□ -1.08
MSH5-216ENST00000484309 ZNF56Q15929 161 aa8.28□□□□□ -1.08
MSH5-216ENST00000484309 LINC01556Q5JQF7 62 aa8.28□□□□□ -1.08
MSH5-216ENST00000484309 SPANXN1Q5VSR9 72 aa8.28□□□□□ -1.08
MSH5-216ENST00000484309 NFE4Q86UQ8 179 aa8.28□□□□□ -1.08
MSH5-216ENST00000484309 C10orf126Q8N4M7 172 aa8.28□□□□□ -1.08
MSH5-216ENST00000484309 TPPP3Q9BW30 176 aa8.28□□□□□ -1.08
MSH5-216ENST00000484309 Q9HAA7 133 aa8.28□□□□□ -1.08
MSH5-216ENST00000484309 VAX2Q9UIW0 290 aa8.28□□□□□ -1.08
MSH5-216ENST00000484309 DNAH5Q8TE73 4624 aa8.27□□□□□ -1.09
MSH5-216ENST00000484309 OR2D3Q8NGH3 330 aa8.27□□□□□ -1.09
MSH5-216ENST00000484309 DAZAP1Q96EP5 407 aaKnown RBP8.27□□□□□ -1.09
MSH5-216ENST00000484309 SSBP4Q9BWG4 385 aaPredicted RBP8.27□□□□□ -1.09
MSH5-216ENST00000484309 LRP1BQ9NZR2 4599 aa8.26□□□□□ -1.09
MSH5-216ENST00000484309 C19orf71A6NCJ1 209 aa8.26□□□□□ -1.09
MSH5-216ENST00000484309 K7EP13 123 aa8.26□□□□□ -1.09
MSH5-216ENST00000484309 OR5AL1P0C617 328 aa8.26□□□□□ -1.09
MSH5-216ENST00000484309 RYR1P21817 5038 aa8.26□□□□□ -1.09
MSH5-216ENST00000484309 A0A087WTM6 91 aa8.25□□□□□ -1.09
MSH5-216ENST00000484309 IBA57-AS1B1ANH7 110 aa8.25□□□□□ -1.09
MSH5-216ENST00000484309 F5H697 171 aa8.25□□□□□ -1.09
MSH5-216ENST00000484309 EREGO14944 169 aa8.25□□□□□ -1.09
MSH5-216ENST00000484309 P01737 135 aa8.25□□□□□ -1.09
MSH5-216ENST00000484309 IGLC6P0CF74 106 aa8.25□□□□□ -1.09
MSH5-216ENST00000484309 BLOC1S1P78537 153 aa8.25□□□□□ -1.09
MSH5-216ENST00000484309 FER1L6-AS1Q8NA97 138 aa8.25□□□□□ -1.09
MSH5-216ENST00000484309 PSCAO43653 123 aa8.24□□□□□ -1.09
MSH5-216ENST00000484309 TAGLN2P37802 199 aaKnown RBP8.24□□□□□ -1.09
MSH5-216ENST00000484309 CEBPGP53567 150 aa8.24□□□□□ -1.09
MSH5-216ENST00000484309 RPS20P60866 119 aaKnown RBP8.24□□□□□ -1.09
MSH5-216ENST00000484309 RAB4BP61018 213 aa8.24□□□□□ -1.09
MSH5-216ENST00000484309 UBE2D3P61077 147 aa8.24□□□□□ -1.09
MSH5-216ENST00000484309 UBE2D2P62837 147 aa8.24□□□□□ -1.09
MSH5-216ENST00000484309 RPL36AP83881 106 aaKnown RBP8.24□□□□□ -1.09
MSH5-216ENST00000484309 DAZ4Q86SG3 579 aaKnown RBP8.24□□□□□ -1.09
MSH5-216ENST00000484309 NEXN-AS1Q8NBZ9 246 aa8.24□□□□□ -1.09
MSH5-216ENST00000484309 RPL36ALQ969Q0 106 aaKnown RBP8.24□□□□□ -1.09
MSH5-216ENST00000484309 SMIM12Q96EX1 92 aa8.24□□□□□ -1.09
MSH5-216ENST00000484309 AP1S3Q96PC3 154 aa8.24□□□□□ -1.09
MSH5-216ENST00000484309 DAZ3Q9NR90 486 aaKnown RBP8.24□□□□□ -1.09
MSH5-216ENST00000484309 TRBV7-3A0A075B6L6 115 aa8.23□□□□□ -1.09
MSH5-216ENST00000484309 TRBV10-1A0A0K0K1A3 114 aa8.23□□□□□ -1.09
MSH5-216ENST00000484309 K7EN84 100 aa8.23□□□□□ -1.09
MSH5-216ENST00000484309 MGPP08493 103 aa8.23□□□□□ -1.09
MSH5-216ENST00000484309 SMIM17P0DL12 118 aa8.23□□□□□ -1.09
MSH5-216ENST00000484309 TOR2AQ5JU69 321 aa8.23□□□□□ -1.09
MSH5-216ENST00000484309 NUDT10Q8NFP7 164 aa8.23□□□□□ -1.09
MSH5-216ENST00000484309 NUDT11Q96G61 164 aa8.23□□□□□ -1.09
MSH5-216ENST00000484309 RNASE7Q9H1E1 156 aaKnown RBP8.23□□□□□ -1.09
MSH5-216ENST00000484309 A0A087WWC5 75 aa8.22□□□□□ -1.09
MSH5-216ENST00000484309 LYZL1Q6UWQ5 148 aa8.22□□□□□ -1.09
MSH5-216ENST00000484309 OR10G8Q8NGN5 311 aa8.22□□□□□ -1.09
MSH5-216ENST00000484309 OCC1Q8TAD7 63 aa8.22□□□□□ -1.09
MSH5-216ENST00000484309 BIN3Q9NQY0 253 aa8.22□□□□□ -1.09
MSH5-216ENST00000484309 KIF25-AS1Q9Y6Z4 181 aa8.22□□□□□ -1.09
MSH5-216ENST00000484309 NIT1Q86X76 327 aa8.21□□□□□ -1.1
MSH5-216ENST00000484309 LYPD6BQ8NI32 183 aa8.21□□□□□ -1.1
MSH5-216ENST00000484309 DNAJC30Q96LL9 226 aa8.21□□□□□ -1.1
MSH5-216ENST00000484309 KRTAP17-1Q9BYP8 105 aa8.21□□□□□ -1.1
MSH5-216ENST00000484309 URGCP-MRPS24S4R325 110 aa8.21□□□□□ -1.1
MSH5-216ENST00000484309 HSPG2P98160 4391 aa8.21□□□□□ -1.1
MSH5-216ENST00000484309 APOBP04114 4563 aaKnown RBP8.2□□□□□ -1.1
MSH5-216ENST00000484309 XKRY2A2RUG3 117 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms