RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 LOC389332A0A1B0GUA5 103 aa19.24■□□□□ 0.67
SHOX2-204ENST00000483851 LINC01546A6NGU7 62 aa19.24■□□□□ 0.67
SHOX2-204ENST00000483851 RBMY1A1P0DJD3 496 aaKnown RBP19.24■□□□□ 0.67
SHOX2-204ENST00000483851 RBMY1CP0DJD4 496 aa19.24■□□□□ 0.67
SHOX2-204ENST00000483851 RBMY1FQ15415 496 aaKnown RBP19.24■□□□□ 0.67
SHOX2-204ENST00000483851 AP1S3Q96PC3 154 aa19.24■□□□□ 0.67
SHOX2-204ENST00000483851 ZMAT5Q9UDW3 170 aaKnown RBP19.24■□□□□ 0.67
SHOX2-204ENST00000483851 LINC01545Q5VT33 79 aa19.24■□□□□ 0.67
SHOX2-204ENST00000483851 MCRIP2Q9BUT9 160 aaKnown RBP19.24■□□□□ 0.67
SHOX2-204ENST00000483851 DPH3P1Q9H4G8 78 aa19.24■□□□□ 0.67
SHOX2-204ENST00000483851 NCR2O95944 276 aa19.23■□□□□ 0.67
SHOX2-204ENST00000483851 SYT8Q8NBV8 401 aa19.22■□□□□ 0.67
SHOX2-204ENST00000483851 MRAP2Q96G30 205 aa19.22■□□□□ 0.67
SHOX2-204ENST00000483851 CBY3A6NI87 242 aa19.22■□□□□ 0.67
SHOX2-204ENST00000483851 GAS8-AS1O95177 125 aa19.21■□□□□ 0.67
SHOX2-204ENST00000483851 MDFICQ9P1T7 246 aa19.21■□□□□ 0.67
SHOX2-204ENST00000483851 LINC00469Q8N7U9 141 aa19.2■□□□□ 0.66
SHOX2-204ENST00000483851 WFDC9Q8NEX5 89 aa19.2■□□□□ 0.66
SHOX2-204ENST00000483851 ST20Q9HBF5 79 aa19.2■□□□□ 0.66
SHOX2-204ENST00000483851 JMJD1CQ15652 2540 aa19.19■□□□□ 0.66
SHOX2-204ENST00000483851 KRTAP24-1Q3LI83 254 aa19.19■□□□□ 0.66
SHOX2-204ENST00000483851 Q6ZN92 141 aa19.19■□□□□ 0.66
SHOX2-204ENST00000483851 POM121L12Q8N7R1 296 aa19.19■□□□□ 0.66
SHOX2-204ENST00000483851 MUC4Q99102 2169 aa19.19■□□□□ 0.66
SHOX2-204ENST00000483851 DEFB125Q8N687 156 aa19.18■□□□□ 0.66
SHOX2-204ENST00000483851 TNFRSF6BO95407 300 aa19.18■□□□□ 0.66
SHOX2-204ENST00000483851 MAP1LC3AQ9H492 121 aa19.18■□□□□ 0.66
SHOX2-204ENST00000483851 PIK3CD-AS1Q5SR53 167 aa19.17■□□□□ 0.66
SHOX2-204ENST00000483851 MORN3Q6PF18 240 aaPredicted RBP19.17■□□□□ 0.66
SHOX2-204ENST00000483851 PTH2Q96A98 100 aa19.17■□□□□ 0.66
SHOX2-204ENST00000483851 LINC01587Q99440 93 aa19.17■□□□□ 0.66
SHOX2-204ENST00000483851 MRPS16Q9Y3D3 137 aaKnown RBP19.17■□□□□ 0.66
SHOX2-204ENST00000483851 NIPBLQ6KC79 2804 aaeCLIP19.17■□□□□ 0.66
SHOX2-204ENST00000483851 PRSS47A8MTI9 375 aa19.16■□□□□ 0.66
SHOX2-204ENST00000483851 HBDP02042 147 aa19.16■□□□□ 0.66
SHOX2-204ENST00000483851 HNRNPA3P51991 378 aaKnown RBP19.16■□□□□ 0.66
SHOX2-204ENST00000483851 C14orf178Q8N769 122 aaPredicted RBP19.16■□□□□ 0.66
SHOX2-204ENST00000483851 TEP1Q99973 2627 aaKnown RBP19.16■□□□□ 0.66
SHOX2-204ENST00000483851 SMIM17P0DL12 118 aa19.16■□□□□ 0.66
SHOX2-204ENST00000483851 C1QTNF4Q9BXJ3 329 aa19.16■□□□□ 0.66
SHOX2-204ENST00000483851 XCL2Q9UBD3 114 aa19.16■□□□□ 0.66
SHOX2-204ENST00000483851 KIF25-AS1Q9Y6Z4 181 aa19.16■□□□□ 0.66
SHOX2-204ENST00000483851 hDV102S1A0JD36 115 aa19.15■□□□□ 0.66
SHOX2-204ENST00000483851 SPRY2O43597 315 aa19.15■□□□□ 0.66
SHOX2-204ENST00000483851 ZNF415Q09FC8 603 aa19.15■□□□□ 0.66
SHOX2-204ENST00000483851 GTSCR1Q86UQ5 136 aa19.15■□□□□ 0.66
SHOX2-204ENST00000483851 PPP1R17O96001 155 aa19.14■□□□□ 0.65
SHOX2-204ENST00000483851 GATA1P15976 413 aaPredicted RBP19.14■□□□□ 0.65
SHOX2-204ENST00000483851 NXT2Q9NPJ8 142 aaKnown RBP19.14■□□□□ 0.65
SHOX2-204ENST00000483851 IGLV2-18A0A075B6J9 118 aa19.13■□□□□ 0.65
SHOX2-204ENST00000483851 WIPF1O43516 503 aa19.13■□□□□ 0.65
SHOX2-204ENST00000483851 NRACQ8N912 160 aa19.13■□□□□ 0.65
SHOX2-204ENST00000483851 SPXQ9BT56 116 aa19.12■□□□□ 0.65
SHOX2-204ENST00000483851 ATRQ13535 2644 aa19.12■□□□□ 0.65
SHOX2-204ENST00000483851 LINC00315P59091 139 aa19.11■□□□□ 0.65
SHOX2-204ENST00000483851 C1orf158Q8N1D5 194 aa19.11■□□□□ 0.65
SHOX2-204ENST00000483851 TMEM208Q9BTX3 173 aa19.11■□□□□ 0.65
SHOX2-204ENST00000483851 ZNF876PQ49A33 203 aa19.11■□□□□ 0.65
SHOX2-204ENST00000483851 H0Y8G0 127 aa19.1■□□□□ 0.65
SHOX2-204ENST00000483851 HTN1P15515 57 aa19.1■□□□□ 0.65
SHOX2-204ENST00000483851 LGALS9BQ3B8N2 356 aa19.1■□□□□ 0.65
SHOX2-204ENST00000483851 LGALS9CQ6DKI2 356 aa19.1■□□□□ 0.65
SHOX2-204ENST00000483851 Q8N8P6 123 aa19.1■□□□□ 0.65
SHOX2-204ENST00000483851 PMCHL2Q9BQD1 86 aa19.1■□□□□ 0.65
SHOX2-204ENST00000483851 WFDC10AQ9H1F0 79 aa19.1■□□□□ 0.65
SHOX2-204ENST00000483851 M0R2P5 195 aa19.09■□□□□ 0.65
SHOX2-204ENST00000483851 SPATA3Q8NHX4 192 aa19.09■□□□□ 0.65
SHOX2-204ENST00000483851 C11orf72Q8NBR9 251 aa19.09■□□□□ 0.65
SHOX2-204ENST00000483851 C20orf78Q9BR46 151 aa19.09■□□□□ 0.65
SHOX2-204ENST00000483851 GOLT1BQ9Y3E0 138 aa19.09■□□□□ 0.65
SHOX2-204ENST00000483851 TENM1Q9UKZ4 2725 aa19.09■□□□□ 0.65
SHOX2-204ENST00000483851 MGPP08493 103 aa19.08■□□□□ 0.65
SHOX2-204ENST00000483851 GIG44P09565 113 aaPredicted RBP19.08■□□□□ 0.65
SHOX2-204ENST00000483851 FCER1GP30273 86 aa19.08■□□□□ 0.65
SHOX2-204ENST00000483851 SHISA2Q6UWI4 295 aa19.08■□□□□ 0.65
SHOX2-204ENST00000483851 TMEM158Q8WZ71 300 aa19.08■□□□□ 0.65
SHOX2-204ENST00000483851 TRAV26-2A0A0B4J265 109 aa19.07■□□□□ 0.64
SHOX2-204ENST00000483851 HSBP1L1C9JCN9 74 aa19.07■□□□□ 0.64
SHOX2-204ENST00000483851 IFI27L1Q96BM0 104 aa19.07■□□□□ 0.64
SHOX2-204ENST00000483851 PRIMA1Q86XR5 153 aa19.06■□□□□ 0.64
SHOX2-204ENST00000483851 CRYGDP07320 174 aa19.05■□□□□ 0.64
SHOX2-204ENST00000483851 C3orf56Q8N813 242 aa19.05■□□□□ 0.64
SHOX2-204ENST00000483851 RASL10AQ92737 203 aa19.05■□□□□ 0.64
SHOX2-204ENST00000483851 JPT2Q9H910 190 aa19.05■□□□□ 0.64
SHOX2-204ENST00000483851 A8MWV9 139 aa19.05■□□□□ 0.64
SHOX2-204ENST00000483851 TCAPO15273 167 aa19.05■□□□□ 0.64
SHOX2-204ENST00000483851 RPL35AP18077 110 aaKnown RBP19.05■□□□□ 0.64
SHOX2-204ENST00000483851 BATFQ16520 125 aa19.05■□□□□ 0.64
SHOX2-204ENST00000483851 COL5A1-AS1Q5SY13 56 aa19.05■□□□□ 0.64
SHOX2-204ENST00000483851 STPG4Q8N801 248 aa19.05■□□□□ 0.64
SHOX2-204ENST00000483851 CSNK1G2-AS1Q8NCQ2 148 aa19.03■□□□□ 0.64
SHOX2-204ENST00000483851 K7EMI3 77 aa19.03■□□□□ 0.64
SHOX2-204ENST00000483851 SUMO2P61956 95 aaKnown RBP19.03■□□□□ 0.64
SHOX2-204ENST00000483851 SLC25A34Q6PIV7 304 aa19.03■□□□□ 0.64
SHOX2-204ENST00000483851 TMEM263Q8WUH6 116 aaKnown RBP19.03■□□□□ 0.64
SHOX2-204ENST00000483851 TP73-AS1Q9UF72 201 aa19.03■□□□□ 0.64
SHOX2-204ENST00000483851 A0A087WWL8 130 aa19.02■□□□□ 0.64
SHOX2-204ENST00000483851 RPL32P62910 135 aaKnown RBP19.02■□□□□ 0.64
SHOX2-204ENST00000483851 IL17DQ8TAD2 202 aa19.02■□□□□ 0.64
SHOX2-204ENST00000483851 C12orf54Q6X4T0 127 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms