RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 PCNX3Q9H6A9 2034 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 MUC22E2RYF6 1773 aaPredicted RBP2.98□□□□□ -1.93
CMSS1-204ENST00000479555 IGLV3-12A0A075B6K2 115 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 TRBV19A0A075B6N1 114 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 TRGV5A0A0B4J1U4 118 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 TRAV3A0A0B4J244 114 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 A0A0U1RQV1 116 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 LYRM9A8MSI8 78 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 IQCF6A8MYZ5 107 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 LMO7DNF2Z398 122 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 MRPS12O15235 138 aaKnown RBP2.98□□□□□ -1.93
CMSS1-204ENST00000479555 LEPROTO15243 131 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 NBR2O15453 112 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 LYZL6O75951 148 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 DNAL4O96015 105 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 COX6B1P14854 86 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 LOXL1Q08397 574 aaPredicted RBP2.98□□□□□ -1.93
CMSS1-204ENST00000479555 CIRBPQ14011 172 aaKnown RBP2.98□□□□□ -1.93
CMSS1-204ENST00000479555 DEFB110Q30KQ9 67 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 Q5XG85 94 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 VKORC1L1Q8N0U8 176 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 TMEM86BQ8N661 226 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 TMEM263Q8WUH6 116 aaKnown RBP2.98□□□□□ -1.93
CMSS1-204ENST00000479555 SMIM2Q9BVW6 85 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 DEFB126Q9BYW3 111 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 CXXC4Q9H2H0 198 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 DPH3P1Q9H4G8 78 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 NDUFA4L2Q9NRX3 87 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 ICOSQ9Y6W8 199 aa2.98□□□□□ -1.93
CMSS1-204ENST00000479555 PHF3Q92576 2039 aaKnown RBP2.98□□□□□ -1.93
CMSS1-204ENST00000479555 TRIOO75962 3097 aa2.97□□□□□ -1.93
CMSS1-204ENST00000479555 LRRK1Q38SD2 2015 aa2.97□□□□□ -1.93
CMSS1-204ENST00000479555 IGKV1OR2-108A0A075B7D4 117 aa2.97□□□□□ -1.93
CMSS1-204ENST00000479555 C5orf63A6NC05 138 aa2.97□□□□□ -1.93
CMSS1-204ENST00000479555 RBMY1BA6NDE4 496 aaKnown RBP2.97□□□□□ -1.93
CMSS1-204ENST00000479555 RBMY1EA6NEQ0 496 aaKnown RBP2.97□□□□□ -1.93
CMSS1-204ENST00000479555 EFNA2O43921 213 aa2.97□□□□□ -1.93
CMSS1-204ENST00000479555 TIMM17BO60830 172 aa2.97□□□□□ -1.93
CMSS1-204ENST00000479555 NXPH4O95158 308 aa2.97□□□□□ -1.93
CMSS1-204ENST00000479555 RBMY1DP0C7P1 496 aaKnown RBP2.97□□□□□ -1.93
CMSS1-204ENST00000479555 RBMY1A1P0DJD3 496 aaKnown RBP2.97□□□□□ -1.93
CMSS1-204ENST00000479555 RBMY1CP0DJD4 496 aa2.97□□□□□ -1.93
CMSS1-204ENST00000479555 GATA1P15976 413 aaPredicted RBP2.97□□□□□ -1.93
CMSS1-204ENST00000479555 EFNA4P52798 201 aa2.97□□□□□ -1.93
CMSS1-204ENST00000479555 CD164Q04900 197 aa2.97□□□□□ -1.93
CMSS1-204ENST00000479555 RBMY1FQ15415 496 aaKnown RBP2.97□□□□□ -1.93
CMSS1-204ENST00000479555 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.97□□□□□ -1.93
CMSS1-204ENST00000479555 GUSBP11Q6P575 273 aa2.97□□□□□ -1.93
CMSS1-204ENST00000479555 LINC00322Q6ZN03 302 aaPredicted RBP2.97□□□□□ -1.93
CMSS1-204ENST00000479555 ZNF826PQ6ZT77 177 aa2.97□□□□□ -1.93
CMSS1-204ENST00000479555 FAM216BQ8N7L0 139 aa2.97□□□□□ -1.93
CMSS1-204ENST00000479555 TMEM167AQ8TBQ9 72 aa2.97□□□□□ -1.93
CMSS1-204ENST00000479555 TMEM243Q9BU79 118 aa2.97□□□□□ -1.93
CMSS1-204ENST00000479555 SRXN1Q9BYN0 137 aa2.97□□□□□ -1.93
CMSS1-204ENST00000479555 RPUSD1Q9UJJ7 312 aaKnown RBP2.97□□□□□ -1.93
CMSS1-204ENST00000479555 SLC25A15Q9Y619 301 aa2.97□□□□□ -1.93
CMSS1-204ENST00000479555 MPDZO75970 2070 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 NCOA6Q14686 2063 aaPredicted RBP2.96□□□□□ -1.94
CMSS1-204ENST00000479555 MYO9BQ13459 2157 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 IGLV2-18A0A075B6J9 118 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 IGHV4-30-2A0A087WSY4 118 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 TMEM223A0PJW6 202 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 EPM2AB3EWF7 344 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 SH2D1AO60880 128 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 FSTL3O95633 263 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 IGHV1-69P01742 117 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 CD24P25063 80 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 SSR4P51571 173 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 C4orf26Q17RF5 130 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 C2orf66Q6UXQ4 117 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 PATE2Q6UY27 113 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 Q6ZT83 130 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 RNF182Q8N6D2 247 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 SAP25Q8TEE9 199 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 C10orf105Q8TEF2 133 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 DYNLRB2Q8TF09 96 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 MRPL53Q96EL3 112 aaKnown RBP2.96□□□□□ -1.94
CMSS1-204ENST00000479555 RNF185Q96GF1 192 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 TIMM21Q9BVV7 248 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 SIRPDQ9H106 197 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 MOB4Q9Y3A3 225 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 LENEPQ9Y5L5 61 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 TRIOBPQ9H2D6 2365 aa2.96□□□□□ -1.94
CMSS1-204ENST00000479555 MUC3AQ02505 3323 aa2.95□□□□□ -1.94
CMSS1-204ENST00000479555 TRBV7-1A0A0A6YYK4 115 aa2.95□□□□□ -1.94
CMSS1-204ENST00000479555 IGHV3-20A0A0C4DH32 117 aa2.95□□□□□ -1.94
CMSS1-204ENST00000479555 TRBV7-6A0A0J9YX20 115 aa2.95□□□□□ -1.94
CMSS1-204ENST00000479555 SPTY2D1-AS1A0A0U1RR47 76 aa2.95□□□□□ -1.94
CMSS1-204ENST00000479555 H3BQ85 93 aa2.95□□□□□ -1.94
CMSS1-204ENST00000479555 LY6LH3BQJ8 138 aa2.95□□□□□ -1.94
CMSS1-204ENST00000479555 H3BRN7 92 aa2.95□□□□□ -1.94
CMSS1-204ENST00000479555 SOCS3O14543 225 aa2.95□□□□□ -1.94
CMSS1-204ENST00000479555 COX7A2LO14548 114 aa2.95□□□□□ -1.94
CMSS1-204ENST00000479555 SAA2P0DJI9 122 aaPredicted RBP2.95□□□□□ -1.94
CMSS1-204ENST00000479555 LOXP28300 417 aaPredicted RBP2.95□□□□□ -1.94
CMSS1-204ENST00000479555 DEFB103AP81534 67 aa2.95□□□□□ -1.94
CMSS1-204ENST00000479555 DAZ2Q13117 558 aaKnown RBP2.95□□□□□ -1.94
CMSS1-204ENST00000479555 ERCC8Q13216 396 aa2.95□□□□□ -1.94
CMSS1-204ENST00000479555 PMAIP1Q13794 54 aa2.95□□□□□ -1.94
CMSS1-204ENST00000479555 SPANXN1Q5VSR9 72 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 383.5 ms