RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 ATP6V0E2Q8NHE4 81 aa15.47■□□□□ 0.07
TRAF4-211ENST00000478021 Q9UF83 564 aa15.47■□□□□ 0.07
TRAF4-211ENST00000478021 TNFRSF18Q9Y5U5 241 aa15.47■□□□□ 0.07
TRAF4-211ENST00000478021 TIRAPP58753 221 aa15.46■□□□□ 0.07
TRAF4-211ENST00000478021 BLOC1S1P78537 153 aa15.46■□□□□ 0.07
TRAF4-211ENST00000478021 PKD1P98161 4303 aa15.45■□□□□ 0.06
TRAF4-211ENST00000478021 TRBV20OR9-2A0A075B6H5 130 aa15.45■□□□□ 0.06
TRAF4-211ENST00000478021 CRYGDP07320 174 aa15.45■□□□□ 0.06
TRAF4-211ENST00000478021 SNAI2O43623 268 aa15.44■□□□□ 0.06
TRAF4-211ENST00000478021 DNAH10OSP0CZ25 163 aa15.44■□□□□ 0.06
TRAF4-211ENST00000478021 TAGLN2P37802 199 aaKnown RBP15.44■□□□□ 0.06
TRAF4-211ENST00000478021 SSTP61278 116 aa15.44■□□□□ 0.06
TRAF4-211ENST00000478021 OR10J3Q5JRS4 329 aa15.44■□□□□ 0.06
TRAF4-211ENST00000478021 DAZAP1Q96EP5 407 aaKnown RBP15.44■□□□□ 0.06
TRAF4-211ENST00000478021 LINC00694P0DN24 101 aa15.43■□□□□ 0.06
TRAF4-211ENST00000478021 GZMBP10144 247 aa15.43■□□□□ 0.06
TRAF4-211ENST00000478021 BTF3P20290 206 aaKnown RBP15.43■□□□□ 0.06
TRAF4-211ENST00000478021 EVI2AP22794 236 aa15.43■□□□□ 0.06
TRAF4-211ENST00000478021 GTSF1LQ9H1H1 148 aa15.43■□□□□ 0.06
TRAF4-211ENST00000478021 TRAV9-2A0A087WT02 112 aa15.42■□□□□ 0.06
TRAF4-211ENST00000478021 C19orf71A6NCJ1 209 aa15.42■□□□□ 0.06
TRAF4-211ENST00000478021 SPANXN1Q5VSR9 72 aa15.42■□□□□ 0.06
TRAF4-211ENST00000478021 Q6ZRN7 208 aaPredicted RBP15.42■□□□□ 0.06
TRAF4-211ENST00000478021 OR2D3Q8NGH3 330 aa15.42■□□□□ 0.06
TRAF4-211ENST00000478021 SMIM12Q96EX1 92 aa15.42■□□□□ 0.06
TRAF4-211ENST00000478021 SSBP4Q9BWG4 385 aaPredicted RBP15.42■□□□□ 0.06
TRAF4-211ENST00000478021 KIAA1109Q2LD37 5005 aa15.41■□□□□ 0.06
TRAF4-211ENST00000478021 TRAV8-6A0A0B4J262 113 aa15.41■□□□□ 0.06
TRAF4-211ENST00000478021 IGHV3-38A0A0C4DH36 116 aa15.41■□□□□ 0.06
TRAF4-211ENST00000478021 OR5AL1P0C617 328 aa15.41■□□□□ 0.06
TRAF4-211ENST00000478021 LELP1Q5T871 98 aa15.41■□□□□ 0.06
TRAF4-211ENST00000478021 TPPP3Q9BW30 176 aa15.41■□□□□ 0.06
TRAF4-211ENST00000478021 PKHD1P08F94 4074 aa15.41■□□□□ 0.06
TRAF4-211ENST00000478021 RBFOX3A6NFN3 312 aa15.4■□□□□ 0.06
TRAF4-211ENST00000478021 P01737 135 aa15.39■□□□□ 0.05
TRAF4-211ENST00000478021 ZNF56Q15929 161 aa15.39■□□□□ 0.05
TRAF4-211ENST00000478021 LYPD6BQ8NI32 183 aa15.39■□□□□ 0.05
TRAF4-211ENST00000478021 MSRB1Q9NZV6 116 aa15.39■□□□□ 0.05
TRAF4-211ENST00000478021 IGHV3-30P01768 117 aa15.38■□□□□ 0.05
TRAF4-211ENST00000478021 IGHV3-33P01772 117 aa15.38■□□□□ 0.05
TRAF4-211ENST00000478021 IGHV3-30-3P0DP02 117 aa15.38■□□□□ 0.05
TRAF4-211ENST00000478021 IGHV3-30-5P0DP03 117 aa15.38■□□□□ 0.05
TRAF4-211ENST00000478021 RPS20P60866 119 aaKnown RBP15.38■□□□□ 0.05
TRAF4-211ENST00000478021 IGLC6P0CF74 106 aa15.37■□□□□ 0.05
TRAF4-211ENST00000478021 LINC01556Q5JQF7 62 aa15.37■□□□□ 0.05
TRAF4-211ENST00000478021 TOR2AQ5JU69 321 aa15.37■□□□□ 0.05
TRAF4-211ENST00000478021 FER1L6-AS1Q8NA97 138 aa15.37■□□□□ 0.05
TRAF4-211ENST00000478021 BIN3Q9NQY0 253 aa15.37■□□□□ 0.05
TRAF4-211ENST00000478021 K7EP13 123 aa15.36■□□□□ 0.05
TRAF4-211ENST00000478021 SPATA12Q7Z6I5 190 aa15.36■□□□□ 0.05
TRAF4-211ENST00000478021 NFE4Q86UQ8 179 aa15.36■□□□□ 0.05
TRAF4-211ENST00000478021 C10orf126Q8N4M7 172 aa15.36■□□□□ 0.05
TRAF4-211ENST00000478021 K7EN84 100 aa15.35■□□□□ 0.05
TRAF4-211ENST00000478021 CEBPGP53567 150 aa15.35■□□□□ 0.05
TRAF4-211ENST00000478021 RAB4BP61018 213 aa15.35■□□□□ 0.05
TRAF4-211ENST00000478021 NUDT10Q8NFP7 164 aa15.35■□□□□ 0.05
TRAF4-211ENST00000478021 OCC1Q8TAD7 63 aa15.35■□□□□ 0.05
TRAF4-211ENST00000478021 NUDT11Q96G61 164 aa15.35■□□□□ 0.05
TRAF4-211ENST00000478021 DYNC1H1Q14204 4646 aaKnown RBP15.35■□□□□ 0.05
TRAF4-211ENST00000478021 C16orf90A8MZG2 172 aa15.34■□□□□ 0.05
TRAF4-211ENST00000478021 TMEM250H0YL14 139 aa15.34■□□□□ 0.05
TRAF4-211ENST00000478021 Q8N3U1 123 aa15.34■□□□□ 0.05
TRAF4-211ENST00000478021 RNASE7Q9H1E1 156 aaKnown RBP15.34■□□□□ 0.05
TRAF4-211ENST00000478021 DNAH11Q96DT5 4516 aa15.34■□□□□ 0.05
TRAF4-211ENST00000478021 TRBV10-1A0A0K0K1A3 114 aa15.33■□□□□ 0.04
TRAF4-211ENST00000478021 XKRY2A2RUG3 117 aa15.33■□□□□ 0.04
TRAF4-211ENST00000478021 F5H697 171 aa15.33■□□□□ 0.04
TRAF4-211ENST00000478021 RPL36AP83881 106 aaKnown RBP15.33■□□□□ 0.04
TRAF4-211ENST00000478021 RPL36ALQ969Q0 106 aaKnown RBP15.33■□□□□ 0.04
TRAF4-211ENST00000478021 AP1S3Q96PC3 154 aa15.33■□□□□ 0.04
TRAF4-211ENST00000478021 EIF5A2Q9GZV4 153 aaKnown RBP15.33■□□□□ 0.04
TRAF4-211ENST00000478021 SMIM17P0DL12 118 aa15.32■□□□□ 0.04
TRAF4-211ENST00000478021 KRTAP10-2P60368 255 aa15.32■□□□□ 0.04
TRAF4-211ENST00000478021 KIF25-AS1Q9Y6Z4 181 aa15.32■□□□□ 0.04
TRAF4-211ENST00000478021 TRBV7-3A0A075B6L6 115 aa15.31■□□□□ 0.04
TRAF4-211ENST00000478021 UBE2D3P61077 147 aa15.31■□□□□ 0.04
TRAF4-211ENST00000478021 UBE2D2P62837 147 aa15.31■□□□□ 0.04
TRAF4-211ENST00000478021 LYZL1Q6UWQ5 148 aa15.31■□□□□ 0.04
TRAF4-211ENST00000478021 NEXN-AS1Q8NBZ9 246 aa15.31■□□□□ 0.04
TRAF4-211ENST00000478021 Q9HAA7 133 aa15.31■□□□□ 0.04
TRAF4-211ENST00000478021 PCLOQ9Y6V0 5065 aa15.31■□□□□ 0.04
TRAF4-211ENST00000478021 A0A087WWC5 75 aa15.3■□□□□ 0.04
TRAF4-211ENST00000478021 MGPP08493 103 aa15.3■□□□□ 0.04
TRAF4-211ENST00000478021 ERVFC1-1P60608 527 aa15.3■□□□□ 0.04
TRAF4-211ENST00000478021 CACNG7P62955 275 aa15.3■□□□□ 0.04
TRAF4-211ENST00000478021 FAM210AQ96ND0 272 aa15.3■□□□□ 0.04
TRAF4-211ENST00000478021 RPP21Q9H633 154 aaKnown RBP15.3■□□□□ 0.04
TRAF4-211ENST00000478021 IBA57-AS1B1ANH7 110 aa15.29■□□□□ 0.04
TRAF4-211ENST00000478021 OR10G8Q8NGN5 311 aa15.29■□□□□ 0.04
TRAF4-211ENST00000478021 FUSP35637 526 aaKnown RBP eCLIP15.28■□□□□ 0.04
TRAF4-211ENST00000478021 F2Z2F3 143 aa15.27■□□□□ 0.04
TRAF4-211ENST00000478021 DAZ4Q86SG3 579 aaKnown RBP15.26■□□□□ 0.03
TRAF4-211ENST00000478021 SMIM7Q9BQ49 75 aa15.26■□□□□ 0.03
TRAF4-211ENST00000478021 DAZ3Q9NR90 486 aaKnown RBP15.26■□□□□ 0.03
TRAF4-211ENST00000478021 A0A087WTM6 91 aa15.25■□□□□ 0.03
TRAF4-211ENST00000478021 EREGO14944 169 aa15.25■□□□□ 0.03
TRAF4-211ENST00000478021 PSCAO43653 123 aa15.25■□□□□ 0.03
TRAF4-211ENST00000478021 SRP19P09132 144 aaKnown RBP15.25■□□□□ 0.03
TRAF4-211ENST00000478021 NTF3P20783 257 aa15.25■□□□□ 0.03
TRAF4-211ENST00000478021 CTRLP40313 264 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms