RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 CXCL1P09341 107 aa9.63□□□□□ -0.87
PDE6D-204ENST00000477748 TAGLN2P37802 199 aaKnown RBP9.63□□□□□ -0.87
PDE6D-204ENST00000477748 NKX2-5P52952 324 aaPredicted RBP9.63□□□□□ -0.87
PDE6D-204ENST00000477748 TIRAPP58753 221 aa9.63□□□□□ -0.87
PDE6D-204ENST00000477748 BLOC1S1P78537 153 aa9.63□□□□□ -0.87
PDE6D-204ENST00000477748 FAM74A4Q5TZK3 123 aa9.63□□□□□ -0.87
PDE6D-204ENST00000477748 SFRP2Q96HF1 295 aa9.63□□□□□ -0.87
PDE6D-204ENST00000477748 DNAH5Q8TE73 4624 aa9.63□□□□□ -0.87
PDE6D-204ENST00000477748 A0A087WWL8 130 aa9.62□□□□□ -0.87
PDE6D-204ENST00000477748 CDK2AP2O75956 126 aa9.62□□□□□ -0.87
PDE6D-204ENST00000477748 GNG4P50150 75 aa9.62□□□□□ -0.87
PDE6D-204ENST00000477748 LINC00315P59091 139 aa9.62□□□□□ -0.87
PDE6D-204ENST00000477748 UFSP1Q6NVU6 142 aa9.62□□□□□ -0.87
PDE6D-204ENST00000477748 ATP6V0E2Q8NHE4 81 aa9.62□□□□□ -0.87
PDE6D-204ENST00000477748 DAZAP1Q96EP5 407 aaKnown RBP9.62□□□□□ -0.87
PDE6D-204ENST00000477748 TRAV8-6A0A0B4J262 113 aa9.61□□□□□ -0.87
PDE6D-204ENST00000477748 GAGE12JA6NER3 117 aa9.61□□□□□ -0.87
PDE6D-204ENST00000477748 IGLV2-8P01709 118 aa9.61□□□□□ -0.87
PDE6D-204ENST00000477748 EVI2AP22794 236 aa9.61□□□□□ -0.87
PDE6D-204ENST00000477748 GAGE1Q13065 139 aa9.61□□□□□ -0.87
PDE6D-204ENST00000477748 GAGE4Q13068 117 aa9.61□□□□□ -0.87
PDE6D-204ENST00000477748 GAGE5Q13069 117 aa9.61□□□□□ -0.87
PDE6D-204ENST00000477748 GAGE13Q4V321 117 aa9.61□□□□□ -0.87
PDE6D-204ENST00000477748 C14orf178Q8N769 122 aaPredicted RBP9.61□□□□□ -0.87
PDE6D-204ENST00000477748 SMIM12Q96EX1 92 aa9.61□□□□□ -0.87
PDE6D-204ENST00000477748 APOBP04114 4563 aaKnown RBP9.61□□□□□ -0.87
PDE6D-204ENST00000477748 CRYGDP07320 174 aa9.6□□□□□ -0.87
PDE6D-204ENST00000477748 DNAH10OSP0CZ25 163 aa9.6□□□□□ -0.87
PDE6D-204ENST00000477748 OR10J3Q5JRS4 329 aa9.6□□□□□ -0.87
PDE6D-204ENST00000477748 OR10AG1Q8NH19 301 aa9.6□□□□□ -0.87
PDE6D-204ENST00000477748 GTSF1LQ9H1H1 148 aa9.6□□□□□ -0.87
PDE6D-204ENST00000477748 MUC21A0A0G2JKD1 596 aa9.59□□□□□ -0.87
PDE6D-204ENST00000477748 MUC21A0A140T8X8 626 aa9.59□□□□□ -0.87
PDE6D-204ENST00000477748 K7EP13 123 aa9.59□□□□□ -0.87
PDE6D-204ENST00000477748 SNAI2O43623 268 aa9.59□□□□□ -0.87
PDE6D-204ENST00000477748 OR5AL1P0C617 328 aa9.59□□□□□ -0.87
PDE6D-204ENST00000477748 LELP1Q5T871 98 aa9.59□□□□□ -0.87
PDE6D-204ENST00000477748 SPANXN1Q5VSR9 72 aa9.59□□□□□ -0.87
PDE6D-204ENST00000477748 SPATA12Q7Z6I5 190 aa9.59□□□□□ -0.87
PDE6D-204ENST00000477748 OR2D3Q8NGH3 330 aa9.59□□□□□ -0.87
PDE6D-204ENST00000477748 SSBP4Q9BWG4 385 aaPredicted RBP9.59□□□□□ -0.87
PDE6D-204ENST00000477748 TRBV20OR9-2A0A075B6H5 130 aa9.58□□□□□ -0.88
PDE6D-204ENST00000477748 IGHV3-38A0A0C4DH36 116 aa9.58□□□□□ -0.88
PDE6D-204ENST00000477748 C19orf71A6NCJ1 209 aa9.58□□□□□ -0.88
PDE6D-204ENST00000477748 RPS20P60866 119 aaKnown RBP9.58□□□□□ -0.88
PDE6D-204ENST00000477748 SSTP61278 116 aa9.58□□□□□ -0.88
PDE6D-204ENST00000477748 BIN3Q9NQY0 253 aa9.58□□□□□ -0.88
PDE6D-204ENST00000477748 Q9UF83 564 aa9.58□□□□□ -0.88
PDE6D-204ENST00000477748 TNFRSF18Q9Y5U5 241 aa9.58□□□□□ -0.88
PDE6D-204ENST00000477748 RBFOX3A6NFN3 312 aa9.57□□□□□ -0.88
PDE6D-204ENST00000477748 P01737 135 aa9.57□□□□□ -0.88
PDE6D-204ENST00000477748 LINC00694P0DN24 101 aa9.57□□□□□ -0.88
PDE6D-204ENST00000477748 GZMBP10144 247 aa9.57□□□□□ -0.88
PDE6D-204ENST00000477748 Q6ZRN7 208 aaPredicted RBP9.57□□□□□ -0.88
PDE6D-204ENST00000477748 NFE4Q86UQ8 179 aa9.57□□□□□ -0.88
PDE6D-204ENST00000477748 C10orf126Q8N4M7 172 aa9.57□□□□□ -0.88
PDE6D-204ENST00000477748 MSRB1Q9NZV6 116 aa9.57□□□□□ -0.88
PDE6D-204ENST00000477748 ZNF56Q15929 161 aa9.56□□□□□ -0.88
PDE6D-204ENST00000477748 LINC01556Q5JQF7 62 aa9.56□□□□□ -0.88
PDE6D-204ENST00000477748 FER1L6-AS1Q8NA97 138 aa9.56□□□□□ -0.88
PDE6D-204ENST00000477748 LYPD6BQ8NI32 183 aa9.56□□□□□ -0.88
PDE6D-204ENST00000477748 TPPP3Q9BW30 176 aa9.56□□□□□ -0.88
PDE6D-204ENST00000477748 TRBV10-1A0A0K0K1A3 114 aa9.55□□□□□ -0.88
PDE6D-204ENST00000477748 XKRY2A2RUG3 117 aa9.55□□□□□ -0.88
PDE6D-204ENST00000477748 IGHV3-30P01768 117 aa9.55□□□□□ -0.88
PDE6D-204ENST00000477748 IGHV3-33P01772 117 aa9.55□□□□□ -0.88
PDE6D-204ENST00000477748 IGLC6P0CF74 106 aa9.55□□□□□ -0.88
PDE6D-204ENST00000477748 IGHV3-30-3P0DP02 117 aa9.55□□□□□ -0.88
PDE6D-204ENST00000477748 IGHV3-30-5P0DP03 117 aa9.55□□□□□ -0.88
PDE6D-204ENST00000477748 RAB4BP61018 213 aa9.55□□□□□ -0.88
PDE6D-204ENST00000477748 F5H697 171 aa9.54□□□□□ -0.88
PDE6D-204ENST00000477748 TMEM250H0YL14 139 aa9.54□□□□□ -0.88
PDE6D-204ENST00000477748 SMIM17P0DL12 118 aa9.54□□□□□ -0.88
PDE6D-204ENST00000477748 RPL36AP83881 106 aaKnown RBP9.54□□□□□ -0.88
PDE6D-204ENST00000477748 TOR2AQ5JU69 321 aa9.54□□□□□ -0.88
PDE6D-204ENST00000477748 MAPKAPK5-AS1Q8N8E1 139 aa9.54□□□□□ -0.88
PDE6D-204ENST00000477748 NUDT10Q8NFP7 164 aa9.54□□□□□ -0.88
PDE6D-204ENST00000477748 OCC1Q8TAD7 63 aa9.54□□□□□ -0.88
PDE6D-204ENST00000477748 RPL36ALQ969Q0 106 aaKnown RBP9.54□□□□□ -0.88
PDE6D-204ENST00000477748 NUDT11Q96G61 164 aa9.54□□□□□ -0.88
PDE6D-204ENST00000477748 AP1S3Q96PC3 154 aa9.54□□□□□ -0.88
PDE6D-204ENST00000477748 A0A087WWC5 75 aa9.53□□□□□ -0.88
PDE6D-204ENST00000477748 CEBPGP53567 150 aa9.53□□□□□ -0.88
PDE6D-204ENST00000477748 KRTAP10-2P60368 255 aa9.53□□□□□ -0.88
PDE6D-204ENST00000477748 CACNG7P62955 275 aa9.53□□□□□ -0.88
PDE6D-204ENST00000477748 EIF5A2Q9GZV4 153 aaKnown RBP9.53□□□□□ -0.88
PDE6D-204ENST00000477748 TRBV7-3A0A075B6L6 115 aa9.52□□□□□ -0.89
PDE6D-204ENST00000477748 IBA57-AS1B1ANH7 110 aa9.52□□□□□ -0.89
PDE6D-204ENST00000477748 F2Z2F3 143 aa9.52□□□□□ -0.89
PDE6D-204ENST00000477748 K7EN84 100 aa9.52□□□□□ -0.89
PDE6D-204ENST00000477748 EREGO14944 169 aa9.52□□□□□ -0.89
PDE6D-204ENST00000477748 ERVFC1-1P60608 527 aa9.52□□□□□ -0.89
PDE6D-204ENST00000477748 LCE2AQ5TA79 106 aaPredicted RBP9.52□□□□□ -0.89
PDE6D-204ENST00000477748 RNASE7Q9H1E1 156 aaKnown RBP9.52□□□□□ -0.89
PDE6D-204ENST00000477748 HERC1Q15751 4861 aa9.51□□□□□ -0.89
PDE6D-204ENST00000477748 UBE2D3P61077 147 aa9.51□□□□□ -0.89
PDE6D-204ENST00000477748 UBE2D2P62837 147 aa9.51□□□□□ -0.89
PDE6D-204ENST00000477748 LYZL1Q6UWQ5 148 aa9.51□□□□□ -0.89
PDE6D-204ENST00000477748 NEXN-AS1Q8NBZ9 246 aa9.51□□□□□ -0.89
PDE6D-204ENST00000477748 OR10G8Q8NGN5 311 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms