RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 FER1L6-AS1Q8NA97 138 aa5.81□□□□□ -1.48
HDAC6-221ENST00000477561 GTSF1Q8WW33 167 aa5.81□□□□□ -1.48
HDAC6-221ENST00000477561 KCNS1Q96KK3 526 aa5.81□□□□□ -1.48
HDAC6-221ENST00000477561 PGLYRP4Q96LB8 373 aa5.81□□□□□ -1.48
HDAC6-221ENST00000477561 NAGKQ9UJ70 344 aa5.81□□□□□ -1.48
HDAC6-221ENST00000477561 TP53TG3Q9ULZ0 132 aa5.81□□□□□ -1.48
HDAC6-221ENST00000477561 DNAH17Q9UFH2 4485 aa5.81□□□□□ -1.48
HDAC6-221ENST00000477561 IGHV1OR15-1A0A075B7D0 117 aa5.8□□□□□ -1.48
HDAC6-221ENST00000477561 IGKV3D-20A0A0C4DH25 116 aa5.8□□□□□ -1.48
HDAC6-221ENST00000477561 A0A0J9YY99 117 aa5.8□□□□□ -1.48
HDAC6-221ENST00000477561 A0A1B0GUT8 65 aa5.8□□□□□ -1.48
HDAC6-221ENST00000477561 F2Z2F3 143 aa5.8□□□□□ -1.48
HDAC6-221ENST00000477561 HLA-DQA1P01909 254 aa5.8□□□□□ -1.48
HDAC6-221ENST00000477561 GZMBP10144 247 aa5.8□□□□□ -1.48
HDAC6-221ENST00000477561 HOXA5P20719 270 aa5.8□□□□□ -1.48
HDAC6-221ENST00000477561 ASIPP42127 132 aa5.8□□□□□ -1.48
HDAC6-221ENST00000477561 HBBP68871 147 aa5.8□□□□□ -1.48
HDAC6-221ENST00000477561 MUC21Q5SSG8 566 aa5.8□□□□□ -1.48
HDAC6-221ENST00000477561 MRPL54Q6P161 138 aaKnown RBP5.8□□□□□ -1.48
HDAC6-221ENST00000477561 FAM159AQ6UWV7 190 aa5.8□□□□□ -1.48
HDAC6-221ENST00000477561 LINC00612Q8N6U2 182 aa5.8□□□□□ -1.48
HDAC6-221ENST00000477561 C15orf53Q8NAA6 179 aa5.8□□□□□ -1.48
HDAC6-221ENST00000477561 C11orf72Q8NBR9 251 aa5.8□□□□□ -1.48
HDAC6-221ENST00000477561 GNB1LQ9BYB4 327 aa5.8□□□□□ -1.48
HDAC6-221ENST00000477561 TMA7Q9Y2S6 64 aaKnown RBP5.8□□□□□ -1.48
HDAC6-221ENST00000477561 TRAPPC1Q9Y5R8 145 aa5.8□□□□□ -1.48
HDAC6-221ENST00000477561 FAT2Q9NYQ8 4349 aa5.8□□□□□ -1.48
HDAC6-221ENST00000477561 TRAV26-1A0A087WT03 109 aa5.79□□□□□ -1.48
HDAC6-221ENST00000477561 TRGV1A0A0A0MS02 117 aa5.79□□□□□ -1.48
HDAC6-221ENST00000477561 SPINK4O60575 86 aa5.79□□□□□ -1.48
HDAC6-221ENST00000477561 IGLC6P0CF74 106 aa5.79□□□□□ -1.48
HDAC6-221ENST00000477561 MED14OSP0DP75 135 aa5.79□□□□□ -1.48
HDAC6-221ENST00000477561 S100A4P26447 101 aaKnown RBP5.79□□□□□ -1.48
HDAC6-221ENST00000477561 CTRLP40313 264 aa5.79□□□□□ -1.48
HDAC6-221ENST00000477561 RAB4BP61018 213 aa5.79□□□□□ -1.48
HDAC6-221ENST00000477561 DAZ2Q13117 558 aaKnown RBP5.79□□□□□ -1.48
HDAC6-221ENST00000477561 ANXA2RQ3ZCQ2 193 aa5.79□□□□□ -1.48
HDAC6-221ENST00000477561 LYZL1Q6UWQ5 148 aa5.79□□□□□ -1.48
HDAC6-221ENST00000477561 LINC00467Q9BRT7 94 aa5.79□□□□□ -1.48
HDAC6-221ENST00000477561 TPPP3Q9BW30 176 aa5.79□□□□□ -1.48
HDAC6-221ENST00000477561 TRGV11A0A075B6L2 103 aa5.78□□□□□ -1.48
HDAC6-221ENST00000477561 TRGV2A0A075B6R0 118 aa5.78□□□□□ -1.48
HDAC6-221ENST00000477561 A0A1B0GXF2 115 aa5.78□□□□□ -1.48
HDAC6-221ENST00000477561 GRIFINA4D1Z8 144 aa5.78□□□□□ -1.48
HDAC6-221ENST00000477561 SNAI2O43623 268 aa5.78□□□□□ -1.48
HDAC6-221ENST00000477561 IGHV3-53P01767 116 aa5.78□□□□□ -1.48
HDAC6-221ENST00000477561 TRGC2P03986 189 aa5.78□□□□□ -1.48
HDAC6-221ENST00000477561 OR5AL1P0C617 328 aa5.78□□□□□ -1.48
HDAC6-221ENST00000477561 CACNG7P62955 275 aa5.78□□□□□ -1.48
HDAC6-221ENST00000477561 TDRG1Q3Y452 100 aa5.78□□□□□ -1.48
HDAC6-221ENST00000477561 DNLZQ5SXM8 178 aa5.78□□□□□ -1.48
HDAC6-221ENST00000477561 FRZBQ92765 325 aa5.78□□□□□ -1.48
HDAC6-221ENST00000477561 MRPL16Q9NX20 251 aaKnown RBP5.78□□□□□ -1.48
HDAC6-221ENST00000477561 MDFICQ9P1T7 246 aa5.78□□□□□ -1.48
HDAC6-221ENST00000477561 C11orf21Q9P2W6 132 aa5.78□□□□□ -1.48
HDAC6-221ENST00000477561 GNRH2O43555 120 aa5.77□□□□□ -1.49
HDAC6-221ENST00000477561 ARMS2P0C7Q2 107 aa5.77□□□□□ -1.49
HDAC6-221ENST00000477561 CAMPP49913 170 aa5.77□□□□□ -1.49
HDAC6-221ENST00000477561 FABP9Q0Z7S8 132 aa5.77□□□□□ -1.49
HDAC6-221ENST00000477561 TMEM136Q6ZRR5 245 aa5.77□□□□□ -1.49
HDAC6-221ENST00000477561 SMIM15Q7Z3B0 74 aa5.77□□□□□ -1.49
HDAC6-221ENST00000477561 GATD1Q8NB37 220 aa5.77□□□□□ -1.49
HDAC6-221ENST00000477561 SSBP4Q9BWG4 385 aaPredicted RBP5.77□□□□□ -1.49
HDAC6-221ENST00000477561 CNFNQ9BYD5 112 aa5.77□□□□□ -1.49
HDAC6-221ENST00000477561 MRPL18Q9H0U6 180 aaKnown RBP5.77□□□□□ -1.49
HDAC6-221ENST00000477561 H3BVH4 76 aa5.76□□□□□ -1.49
HDAC6-221ENST00000477561 APCSP02743 223 aa5.76□□□□□ -1.49
HDAC6-221ENST00000477561 S100A6P06703 90 aa5.76□□□□□ -1.49
HDAC6-221ENST00000477561 CCL18P55774 89 aa5.76□□□□□ -1.49
HDAC6-221ENST00000477561 ZNF415Q09FC8 603 aa5.76□□□□□ -1.49
HDAC6-221ENST00000477561 TWIST1Q15672 202 aa5.76□□□□□ -1.49
HDAC6-221ENST00000477561 LGALS9BQ3B8N2 356 aa5.76□□□□□ -1.49
HDAC6-221ENST00000477561 SPANXN1Q5VSR9 72 aa5.76□□□□□ -1.49
HDAC6-221ENST00000477561 LINC00588Q9Y4M8 146 aa5.76□□□□□ -1.49
HDAC6-221ENST00000477561 PHLDA3Q9Y5J5 127 aa5.76□□□□□ -1.49
HDAC6-221ENST00000477561 HECTD4Q9Y4D8 3996 aa5.75□□□□□ -1.49
HDAC6-221ENST00000477561 IGHV3-16A0A0C4DH30 117 aa5.75□□□□□ -1.49
HDAC6-221ENST00000477561 RTL8CO15255 209 aa5.75□□□□□ -1.49
HDAC6-221ENST00000477561 TRGC1P0CF51 173 aa5.75□□□□□ -1.49
HDAC6-221ENST00000477561 NTF3P20783 257 aa5.75□□□□□ -1.49
HDAC6-221ENST00000477561 Q6ZR54 194 aa5.75□□□□□ -1.49
HDAC6-221ENST00000477561 ZNF575Q86XF7 245 aa5.75□□□□□ -1.49
HDAC6-221ENST00000477561 ZFP82Q8N141 532 aa5.75□□□□□ -1.49
HDAC6-221ENST00000477561 SYT8Q8NBV8 401 aa5.75□□□□□ -1.49
HDAC6-221ENST00000477561 VSIG2Q96IQ7 327 aa5.75□□□□□ -1.49
HDAC6-221ENST00000477561 SCRT2Q9NQ03 307 aa5.75□□□□□ -1.49
HDAC6-221ENST00000477561 PKD1P98161 4303 aa5.74□□□□□ -1.49
HDAC6-221ENST00000477561 PRSS29PA6NIE9 313 aa5.74□□□□□ -1.49
HDAC6-221ENST00000477561 PHOX2AO14813 284 aa5.74□□□□□ -1.49
HDAC6-221ENST00000477561 RNASE3P12724 160 aaKnown RBP5.74□□□□□ -1.49
HDAC6-221ENST00000477561 LORP23490 312 aaPredicted RBP5.74□□□□□ -1.49
HDAC6-221ENST00000477561 ESRGQ1W209 222 aa5.74□□□□□ -1.49
HDAC6-221ENST00000477561 OR10AG1Q8NH19 301 aa5.74□□□□□ -1.49
HDAC6-221ENST00000477561 ZNRF2Q8NHG8 242 aa5.74□□□□□ -1.49
HDAC6-221ENST00000477561 C9orf85Q96MD7 179 aa5.74□□□□□ -1.49
HDAC6-221ENST00000477561 C18orf15Q96N68 181 aa5.74□□□□□ -1.49
HDAC6-221ENST00000477561 TMEM191AQ9H0A3 160 aa5.74□□□□□ -1.49
HDAC6-221ENST00000477561 NACAE9PAV3 2078 aa5.73□□□□□ -1.49
HDAC6-221ENST00000477561 A0A096LPF7 62 aa5.73□□□□□ -1.49
HDAC6-221ENST00000477561 MUC21A0A0G2JKD1 596 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms