RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 TMEM131LA2VDJ0 1609 aa1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 TET3O43151 1660 aa1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 DOCK2Q92608 1830 aa1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 LOC107984156A0A0G2JMH3 177 aa1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 RBAKDNA6NC62 111 aa1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 J3QKU1 62 aa1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 M0R233 179 aa1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 PITX3O75364 302 aa1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 SFT2D2O95562 160 aa1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 NMBP08949 121 aa1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 PRB4P10163 310 aaPredicted RBP1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 PIPP12273 146 aaPredicted RBP1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 ATP5EP56381 51 aaPredicted RBP1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 MRPS36P82909 103 aaKnown RBP1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 ADIRFQ15847 76 aa1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 ARL17AQ8IVW1 177 aa1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 ATP6V0E2Q8NHE4 81 aa1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 MUCL1Q96DR8 90 aa1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 NPVFQ9HCQ7 196 aa1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 TMEM242Q9NWH2 141 aa1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 SHANK2Q9UPX8 1470 aa1.8□□□□□ -2.12
SOX2-OT-207ENST00000476964 ALPK3Q96L96 1907 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 POLEQ07864 2286 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 IGHV1-24A0A0C4DH33 117 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 B4DSR2 109 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 NDUFB6O95139 128 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 GYPAP02724 150 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 SAA1P0DJI8 122 aaPredicted RBP1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 SLC25A6P12236 298 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 FAUP35544 74 aaKnown RBP1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 POLR2JP52435 117 aaKnown RBP1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 DSCR4P56555 118 aaPredicted RBP1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 ROMO1P60602 79 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 Q0VG73 95 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 INSL4Q14641 139 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 RPL7L1Q6DKI1 246 aaKnown RBP1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 Q6ZS92 163 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 Q8N2B8 174 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 VSTM2AQ8TAG5 236 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 DIRC1Q969H9 104 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 S100A16Q96FQ6 103 aaKnown RBP1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 LINC00312Q9Y6C7 94 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 TOP2BQ02880 1626 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 ABCA9Q8IUA7 1624 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 MYO3AQ8NEV4 1616 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 LAMB1P07942 1786 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 HEATR5BQ9P2D3 2071 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 MED12LQ86YW9 2145 aa1.79□□□□□ -2.12
SOX2-OT-207ENST00000476964 CHD3Q12873 2000 aaKnown RBP1.78□□□□□ -2.12
SOX2-OT-207ENST00000476964 TNRC6AQ8NDV7 1962 aaKnown RBP1.78□□□□□ -2.12
SOX2-OT-207ENST00000476964 TIAM1Q13009 1591 aa1.78□□□□□ -2.12
SOX2-OT-207ENST00000476964 IGKV2D-26A0A0A0MRZ7 120 aa1.78□□□□□ -2.12
SOX2-OT-207ENST00000476964 TRBV6-8A0A0A6YYG3 113 aa1.78□□□□□ -2.12
SOX2-OT-207ENST00000476964 PIGBOS1A0A0B4J2F0 54 aa1.78□□□□□ -2.12
SOX2-OT-207ENST00000476964 UBE2L5PA0A1B0GUS4 154 aa1.78□□□□□ -2.12
SOX2-OT-207ENST00000476964 TCRBV4S1A1TA0A5B7 111 aa1.78□□□□□ -2.12
SOX2-OT-207ENST00000476964 CRYM-AS1A6NIL9 109 aa1.78□□□□□ -2.12
SOX2-OT-207ENST00000476964 M0R2P5 195 aa1.78□□□□□ -2.12
SOX2-OT-207ENST00000476964 RNASE3P12724 160 aaKnown RBP1.78□□□□□ -2.12
SOX2-OT-207ENST00000476964 IL9P15248 144 aa1.78□□□□□ -2.12
SOX2-OT-207ENST00000476964 COX7CP15954 63 aa1.78□□□□□ -2.12
SOX2-OT-207ENST00000476964 ASIPP42127 132 aa1.78□□□□□ -2.12
SOX2-OT-207ENST00000476964 UBE2L3P68036 154 aaKnown RBP1.78□□□□□ -2.12
SOX2-OT-207ENST00000476964 C1orf137Q5JT78 98 aa1.78□□□□□ -2.12
SOX2-OT-207ENST00000476964 C12orf73Q69YU5 71 aa1.78□□□□□ -2.12
SOX2-OT-207ENST00000476964 ARPINQ7Z6K5 226 aa1.78□□□□□ -2.12
SOX2-OT-207ENST00000476964 TSKUQ8WUA8 353 aa1.78□□□□□ -2.12
SOX2-OT-207ENST00000476964 SPCS1Q9Y6A9 102 aa1.78□□□□□ -2.12
SOX2-OT-207ENST00000476964 ZFC3H1O60293 1989 aaKnown RBP1.78□□□□□ -2.13
SOX2-OT-207ENST00000476964 MCM3APO60318 1980 aa1.78□□□□□ -2.13
SOX2-OT-207ENST00000476964 PATJQ8NI35 1801 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 PREX2Q70Z35 1606 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 MADDQ8WXG6 1647 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 PXDNQ92626 1479 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 ABCC5O15440 1437 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 TRAV17A0A0B4J275 112 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 hDV103S1A0JD37 113 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 E7EUB6 86 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 F8W1H4 67 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 ATOX1O00244 68 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 SSSCA1O60232 199 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 ERC2-IT1O76042 136 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 DCDP81605 110 aaKnown RBP1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 RBM3P98179 157 aaKnown RBP1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 SPRNQ5BIV9 151 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 Q5BKY6 102 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 C1orf134Q5TEV5 83 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 LINC00299Q6ZSB3 139 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 OR10AG1Q8NH19 301 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 SMIM7Q9BQ49 75 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 KLK9Q9UKQ9 250 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 SNURFQ9Y675 71 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 MAP2P11137 1827 aaKnown RBP1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 COL11A1P12107 1806 aaPredicted RBP1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 TNS1Q9HBL0 1735 aaKnown RBP1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 SHROOM2Q13796 1616 aa1.77□□□□□ -2.13
SOX2-OT-207ENST00000476964 ABCA8O94911 1581 aa1.76□□□□□ -2.13
SOX2-OT-207ENST00000476964 TOP2AP11388 1531 aaKnown RBP1.76□□□□□ -2.13
SOX2-OT-207ENST00000476964 GOLGA3Q08378 1498 aa1.76□□□□□ -2.13
SOX2-OT-207ENST00000476964 C10orf71Q711Q0 1435 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms