RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 ICOSQ9Y6W8 199 aa2.83□□□□□ -1.96
LSM2-211ENST00000475835 SPAG17Q6Q759 2223 aa2.83□□□□□ -1.96
LSM2-211ENST00000475835 UNC13CQ8NB66 2214 aa2.83□□□□□ -1.96
LSM2-211ENST00000475835 IGHV3-15A0A0B4J1V0 119 aa2.82□□□□□ -1.96
LSM2-211ENST00000475835 EPOPA6NHQ4 379 aa2.82□□□□□ -1.96
LSM2-211ENST00000475835 PSPNO60542 156 aa2.82□□□□□ -1.96
LSM2-211ENST00000475835 PRM2P04554 102 aa2.82□□□□□ -1.96
LSM2-211ENST00000475835 IAPPP10997 89 aa2.82□□□□□ -1.96
LSM2-211ENST00000475835 C6orf99Q4VX62 202 aa2.82□□□□□ -1.96
LSM2-211ENST00000475835 C11orf71Q6IPW1 123 aa2.82□□□□□ -1.96
LSM2-211ENST00000475835 CRIP3Q6Q6R5 217 aa2.82□□□□□ -1.96
LSM2-211ENST00000475835 Q6ZS52 159 aa2.82□□□□□ -1.96
LSM2-211ENST00000475835 C17orf82Q86X59 251 aaPredicted RBP2.82□□□□□ -1.96
LSM2-211ENST00000475835 LINC00269Q8N2A0 174 aa2.82□□□□□ -1.96
LSM2-211ENST00000475835 DEFB119Q8N690 84 aa2.82□□□□□ -1.96
LSM2-211ENST00000475835 Q8N6K4 173 aa2.82□□□□□ -1.96
LSM2-211ENST00000475835 CLEC2BQ92478 149 aa2.82□□□□□ -1.96
LSM2-211ENST00000475835 TTTY13Q9BZ97 58 aa2.82□□□□□ -1.96
LSM2-211ENST00000475835 MAP6D1Q9H9H5 199 aa2.82□□□□□ -1.96
LSM2-211ENST00000475835 CCL28Q9NRJ3 127 aa2.82□□□□□ -1.96
LSM2-211ENST00000475835 DSCAMO60469 2012 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 IGLV3-12A0A075B6K2 115 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 IGKV1-27A0A075B6S5 117 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 IGHV3OR16-10A0A075B7F0 116 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 IGHV6-1A0A0B4J1U7 121 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 TRAV40A0A0B4J280 105 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 TRGV8A0A0C4DH27 118 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 IGKV1-12A0A0C4DH73 117 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 SDHAF1A6NFY7 115 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 IGKV1D-12P01611 117 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 IGHV4-39P01824 125 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 ZNF32P17041 273 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 ZNF138P52744 262 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 TNP2Q05952 138 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 SYCNQ0VAF6 134 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 ATP1A1-AS1Q5TC04 95 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 FAM27BQ5VT28 67 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 PATE2Q6UY27 113 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 SCXQ7RTU7 201 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 TMEM141Q96I45 108 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 TIMM8BQ9Y5J9 83 aaPredicted RBP2.81□□□□□ -1.96
LSM2-211ENST00000475835 ESPL1Q14674 2120 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 F5P12259 2224 aa2.81□□□□□ -1.96
LSM2-211ENST00000475835 KIAA0100Q14667 2235 aaKnown RBP2.81□□□□□ -1.96
LSM2-211ENST00000475835 SHANK1Q9Y566 2161 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 IGHV1-69DA0A0B4J2H0 117 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 hDV103S1A0JD37 113 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 C11orf86A6NJI1 115 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 C10orf142B7Z368 130 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 C12orf77C9JDV5 145 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 D6R8Y8 96 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 GNRH2O43555 120 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 PPP1R17O96001 155 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 IGHV4-31P0DP07 118 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 EDDM3BP56851 147 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 B3GALT5-AS1P59052 145 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 HOXA4Q00056 320 aaPredicted RBP2.8□□□□□ -1.96
LSM2-211ENST00000475835 MORN5Q5VZ52 161 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 SFTA2Q6UW10 78 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 IGFL3Q6UXB1 125 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 NRACQ8N912 160 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 ITLN1Q8WWA0 313 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 ITLN2Q8WWU7 325 aaPredicted RBP2.8□□□□□ -1.96
LSM2-211ENST00000475835 FAM168AQ92567 244 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 PSMG3-AS1Q96PY0 264 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 CABIN1Q9Y6J0 2220 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 ARFGEF3Q5TH69 2177 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 ABCA7Q8IZY2 2146 aa2.8□□□□□ -1.96
LSM2-211ENST00000475835 SEC16AO15027 2179 aa2.79□□□□□ -1.96
LSM2-211ENST00000475835 TRBV6-6A0A0A6YYG2 114 aa2.79□□□□□ -1.96
LSM2-211ENST00000475835 A0A0G2JRQ6 117 aa2.79□□□□□ -1.96
LSM2-211ENST00000475835 TRBV7-4A0A0J9YYF1 115 aa2.79□□□□□ -1.96
LSM2-211ENST00000475835 C3orf84H3BNL1 204 aa2.79□□□□□ -1.96
LSM2-211ENST00000475835 ZNHIT1O43257 154 aa2.79□□□□□ -1.96
LSM2-211ENST00000475835 PRSS2P07478 247 aa2.79□□□□□ -1.96
LSM2-211ENST00000475835 P0C879 139 aa2.79□□□□□ -1.96
LSM2-211ENST00000475835 PATE4P0C8F1 98 aa2.79□□□□□ -1.96
LSM2-211ENST00000475835 CCL3P10147 92 aa2.79□□□□□ -1.96
LSM2-211ENST00000475835 ZNF137PP52743 207 aa2.79□□□□□ -1.96
LSM2-211ENST00000475835 LMO4P61968 165 aa2.79□□□□□ -1.96
LSM2-211ENST00000475835 FAM229BQ4G0N7 80 aa2.79□□□□□ -1.96
LSM2-211ENST00000475835 FAM53AQ6NSI3 398 aaPredicted RBP2.79□□□□□ -1.96
LSM2-211ENST00000475835 SOSTDC1Q6X4U4 206 aa2.79□□□□□ -1.96
LSM2-211ENST00000475835 Q6ZRP5 223 aa2.79□□□□□ -1.96
LSM2-211ENST00000475835 PRNTQ86SH4 94 aa2.79□□□□□ -1.96
LSM2-211ENST00000475835 Q8IYB0 196 aa2.79□□□□□ -1.96
LSM2-211ENST00000475835 LIMD2Q9BT23 127 aa2.79□□□□□ -1.96
LSM2-211ENST00000475835 BPESC1Q9GZL8 116 aa2.79□□□□□ -1.96
LSM2-211ENST00000475835 CDC42SE1Q9NRR8 79 aa2.79□□□□□ -1.96
LSM2-211ENST00000475835 ASXL3Q9C0F0 2248 aa2.78□□□□□ -1.96
LSM2-211ENST00000475835 DSCAML1Q8TD84 2053 aa2.78□□□□□ -1.96
LSM2-211ENST00000475835 TET2Q6N021 2002 aaPredicted RBP2.78□□□□□ -1.96
LSM2-211ENST00000475835 IGHV1-45A0A0A0MS14 117 aa2.78□□□□□ -1.96
LSM2-211ENST00000475835 MRPL33O75394 65 aaKnown RBP2.78□□□□□ -1.96
LSM2-211ENST00000475835 IGHV3-13P01766 116 aa2.78□□□□□ -1.96
LSM2-211ENST00000475835 IGKV1-16P04430 117 aa2.78□□□□□ -1.96
LSM2-211ENST00000475835 SEC61BP60468 96 aaKnown RBP2.78□□□□□ -1.96
LSM2-211ENST00000475835 LINC00242Q5T6M2 205 aa2.78□□□□□ -1.96
LSM2-211ENST00000475835 Q6ZPA2 131 aa2.78□□□□□ -1.96
LSM2-211ENST00000475835 C18orf65Q6ZTR6 163 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms